Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g00861 ATGGATCACAGAACAAAGTCGAAGGACTCGCTCAACTACTCTACTCTCTTCAATCTCGAGTCTTTGATGAACTTTCAACTTCCAGAACAAGATGATGATTTCGATTATTACGAAAATAGTAGTCAGGATGAGAGCAGAGATAGCCAAGTAGGTAGGGCTGTTGCAAATTACAGTAATGGGAATATGCGTGGTAAGGAGGTGAGTTCGGCGAAGAAGAGGAAGTGGTCTCAGAACGGGGACAATGAGGAAAGGAGCAAGCATATTCAGAAATACAAGAGGAGGTTTAATGATAACTCATCTAGTCCTGCTCAAAATCAGGTTGTTGCTCCTCTTCTCAAAAGTAGCGTGGGTTCAAAAGCTCACAAGTCAGGGACTGAACTCAGGAGGGGACTACATGCTGCAGAGACTACATCTGAGTGGATGAATGGTTCCAATTCTCAGAAAATGGGAAATTACCGTGATTCCGATCTCTTGAAGCAATATTGCCCCAATAGGACAATATATGAACCTGCTTTTTTGGATATTGGGGATGGTATCACTTACAAGATTCCTCCAAGATATGATAAGTTAGCTGCATTGCTCAACCTTCCTACCTTCTCAGAGATCCATGTTCAGGATTTCTACTTAAAGGGTACCTTGGATTTGGGATCCTTGGCTGAAATGATGGCTGCTGATAAAAGATTTGGGAACAGAAACCGGATAGGCATGGGGGAAACCATACCCCACTATGAATCACTTCAGGCACGATTGAAGGTCATGTCAGCTTCTAATTCACCTCATAAGTTCAGTCTGAAAGTATCAGACTTGAACTCCTCCATTCCCGAGGGGGCTGCTGGAAACATCAAGCGATCTATTCTGTCCGAGGGTGGTGTATTGCAGATTTACTATGTGAAGGTTTTGGAGAAAGGGGACACTTATGAGATCATTGAACGAAGCCTACCCAAGAAGCAAAAGGTAAAGAAAGACCCTGCTTTGATAGAGAAGGAGGAAATGGAAAGAATTGGTAAGATTTGGGTGAACATTGTTAGAAGAGATATACCCAAGCATCAGAGGAACTTCACTGCTTTGCATCGAAAGCAGCTTGTTGATGCCAAGAGGTTTGCTGAGAACTGTCAGAGAGAGGCATGCCCTGTTAGGCTGAAAGTGAGTAGATCAATTAAATGGACGCGGACTGCTGGTATACGCACCCGAAAACTTGCTAGAGACATGTTGCTATTCTGGAAGCGAATAGATAAGGAGATGGCAGAAGTACGGAGACGAGAGGAGAAAGAAGCCGCTGAAGCTTTGAGGCGTGAACAGGAGCTTCGTGAAGCAAAGCGGCAGCAGCAAAGGCTGAATTTTCTTATACAGCAAACTGAGCTGTACAGTCACTTTATGCAGAACAAGTCAAGCTTGATATCAGAAGCTTTACCCATGGGTGATGAAAGTACAAATGACCAAGATCTAATTGACTCTTCAACTTTTGGGCGTAATGAGGAGGAAGATCATGAAGAGGCTGAGTTGAAGAAGGAAGCTCTGAAGGCTGCTCAAGAAGCTGTTTCCAAACAGAGAAGATTGACAAGTGCTTTTGACACCGAGTGCTTGAGGCTGCGCCAGGCTGATGAAGCTGATTTACTCCAACCAGCTCTCTCCTCAACCATGCCAGTGGCCTCCACAGTTCGGACACCAGAATTGTTTAAAGGTGTTCTCAAAGAGTATCAGCTAAAAGGTCTTCAATGGCTAGTTAATTGTTATGAGCAGGGTTTAAATGGTATTCTTGCGGACGAGATGGGTCTTGGAAAGACCATTCAGGCTATGGCTTTTTTAGCCCATCTAGCTGAGGAGAAAAACATATGGGGACCTTTCCTGGTTGTTGCACCTGCATCTGTATTAAACAATTGGAATGAGGAACTTGAGCGCTTTTGCCCTGAACTGAAAAGACTTCCTTATTGGGGTGGGGTTGCAGAGCGGTCAGTGCTTAGGAAAAGTATTAACCCAAAGGATCTTTATCGCAGGGAAGCCAAATTTCATGTCCTCATCACAAGCTATCAGTTATTAGTTACTGATGAGAAGTTTTTTCGTCGTGTAAAATGGCAGTACATGGTTTTAGATGAAGCCCAGGCAATTAAAAGTTCTGCCAGTATAAGATGGAAGACGCTCCTAAGTTTTAATTGTCGGAATCGCTTACTGCTGACTGGTACACCTATTCAGAATAATATGGCAGAGTTGTGGTCTCTTTTGCATTTCATTATGCCAACATTATTTGACAGCCATGAGCAGTTTAATGAGTGGTTTTCAAAAGGAATTGAGAACCATGCTGAACATGGGGGTACTTTGAATGAGCACCAACTGAATAGATTGCATTCAATCTTAAAGCCGTTCATGCTGCGCCGTGTTAAAAAAGATGTAATCTCTGAGCTGACCACTAAAACTGAAGTTACAGTTCACTGCAAGTTGAGTTCTCGACAACAGGCTTTCTATCAAGCAATTAAAAACAAGATATCTCTCGCTGAACTGTTTGATAGTAATCGTGGACAGCTCAATGAGAAGAGAATTTTGAATTTAATGAACATTGTTATTCAACTAAGGAAGGTTTGCAACCATCCAGAATTATTTGAAAGGAGTGAGGGAAGCACATACCTTCATTTTGGAGAGATTCCAAATTCTCTTCTACCTCCTCCATTTGGGGAGTTGGAGGATGTATACTATTCTGGGGGTCACAACCCCATTTCATACGAGATACCAAAACTTGTGTATCGAGAAATTATGCAGAGTTCTGAGACTCTTGGTTCAGCTGTTGGTCATGGTGTCTGCAGAGAATCTTTTCTGAAACATTTTAATATTTTTAGACCAGAAAATGTTTATCGATCTGTTTTCCCAGAAGGTATGTGTGTTAGCAGTGGAGGCTTTGGTTTTACCCATATGACGGATTTGTCTCCACAAGAGGTGGCATTTTTGGCTAATGGTTCTTTTATGGAGCAATTGTTATTTTCTATGATGAGATCGGATAAAAAATTCATCGATGAAGTTGTAGATTTTCTTGTTGAGACCATAGATGATGATGATCCAGAATGTAGTAATCTTGAGAAAGGGAAAGTGAGAGCTGTTACTCGAATGTTATTGGTGCCATCAAAATCTGAAACTCAGTTTCTTCAAAGAAGATTTCCAACTGGGCCCAGCCATGCTCCTTTTGAGGCCTTGGTAGTCTCAGATCAGGATAGACTTTTGTCAAATGCAAGGCTGCTTCACTCGGCATACACATATATCCCACGGAGTAGAGCTCCCCCAGTTGGTGTTCACTGCTCTGATAGAAACTTTTACTATAAAATGATTGAAGAATTCCACAATCCTTGGATTAAGAGGTTGTTTGTGGGATTTGCACGTACATCTGAATGTAACGGGCCGAGAATGCCAGATTGTCATCATTTAATTGAAGAAATAGATTCTGAACTACCTGTTTCTCAGCCTGCTCTACAGTTAACACACAGTATTTTTGGGTCTTCTCCACCTATGTGGAATTTTGACCCAGCAAAGTTGTTGACTGACTCTGGGAAGCTTCAAACGCTTGATATATTATTGAGACGCTTAAGAGCTGAAAATCATCGTGTTCTTTTGTTTGCCCAGATGACTAAGATGCTGAACATTTTGGAGGACTATATGAACTACAGAAAATATAGGTATTTCAGACTTGATGGATCATCTACTATACAAGATCGTAGAGACATGGTCAGAGACTTCCAGAATAGGCCTGATATTTTTGTGTTCTTGTTGAGTACAAGAGCTGGTGGACTTGGCATCAACTTGACAGCTGCTGACACAGTCATATTTTACGAGAGTGATTGGAATCCAACATTAGATCTACAGGCAATGGACAGAGCTCATCGTTTGGGTCAGACAAGAGATGTTACTGTTTACCGACTTATATGCAAAGAGACGGTTGAAGAAAAAATTCTTCATAGAGCAAGCCAGAAAAGTACTGTACAAAACCTTGTAATGACTGGGGGTTCTGTTGGTGGTGATCTTTTAGCTCCTGAGGATGTTGTTTCTTTGCTTCTAGATGATCCCCAGTTGGAGCAGAAATTAAAGGAAATTCCCCTCCAGGCAAAGGATAAGCAAAAGAAAAAACAACCTGCAAGGGGCATTTTCTTAAATGAAGAAGGTGATGCATCTCTTCAAGATTTAACCAACGCTGTACCCCAGGGTACTGTGGATAATGATCTTACTGTGGACACAGAGGGTTCAAAGTCTGCTAATAAAAAGAGAAAAGCTGCCTCGGATAAGCAGACTTCAAGGCTGAAGAGTTCTCAGAAGATAAGTGATGTCGGTATTACAGCCATGGACGACGAATTGGATGACCTGAACACTGATCCAGTTGGCCAGAAGCCCAAGAGACCAAAAAGGTTAAAGAAGAGTGTTAATGAGAGGTTCGAAGAGGCCTCTATTGGCACGGCCACTGCCGTCACAGAGCAGACCCAATATCCACCTCCACAGGATTTCACATCCATCGTTCCTAGAGCAGAAACGAGCCTAGACCCCTAA 4518 0.4228 MDHRTKSKDSLNYSTLFNLESLMNFQLPEQDDDFDYYENSSQDESRDSQVGRAVANYSNGNMRGKEVSSAKKRKWSQNGDNEERSKHIQKYKRRFNDNSSSPAQNQVVAPLLKSSVGSKAHKSGTELRRGLHAAETTSEWMNGSNSQKMGNYRDSDLLKQYCPNRTIYEPAFLDIGDGITYKIPPRYDKLAALLNLPTFSEIHVQDFYLKGTLDLGSLAEMMAADKRFGNRNRIGMGETIPHYESLQARLKVMSASNSPHKFSLKVSDLNSSIPEGAAGNIKRSILSEGGVLQIYYVKVLEKGDTYEIIERSLPKKQKVKKDPALIEKEEMERIGKIWVNIVRRDIPKHQRNFTALHRKQLVDAKRFAENCQREACPVRLKVSRSIKWTRTAGIRTRKLARDMLLFWKRIDKEMAEVRRREEKEAAEALRREQELREAKRQQQRLNFLIQQTELYSHFMQNKSSLISEALPMGDESTNDQDLIDSSTFGRNEEEDHEEAELKKEALKAAQEAVSKQRRLTSAFDTECLRLRQADEADLLQPALSSTMPVASTVRTPELFKGVLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWGPFLVVAPASVLNNWNEELERFCPELKRLPYWGGVAERSVLRKSINPKDLYRREAKFHVLITSYQLLVTDEKFFRRVKWQYMVLDEAQAIKSSASIRWKTLLSFNCRNRLLLTGTPIQNNMAELWSLLHFIMPTLFDSHEQFNEWFSKGIENHAEHGGTLNEHQLNRLHSILKPFMLRRVKKDVISELTTKTEVTVHCKLSSRQQAFYQAIKNKISLAELFDSNRGQLNEKRILNLMNIVIQLRKVCNHPELFERSEGSTYLHFGEIPNSLLPPPFGELEDVYYSGGHNPISYEIPKLVYREIMQSSETLGSAVGHGVCRESFLKHFNIFRPENVYRSVFPEGMCVSSGGFGFTHMTDLSPQEVAFLANGSFMEQLLFSMMRSDKKFIDEVVDFLVETIDDDDPECSNLEKGKVRAVTRMLLVPSKSETQFLQRRFPTGPSHAPFEALVVSDQDRLLSNARLLHSAYTYIPRSRAPPVGVHCSDRNFYYKMIEEFHNPWIKRLFVGFARTSECNGPRMPDCHHLIEEIDSELPVSQPALQLTHSIFGSSPPMWNFDPAKLLTDSGKLQTLDILLRRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYFRLDGSSTIQDRRDMVRDFQNRPDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLGQTRDVTVYRLICKETVEEKILHRASQKSTVQNLVMTGGSVGGDLLAPEDVVSLLLDDPQLEQKLKEIPLQAKDKQKKKQPARGIFLNEEGDASLQDLTNAVPQGTVDNDLTVDTEGSKSANKKRKAASDKQTSRLKSSQKISDVGITAMDDELDDLNTDPVGQKPKRPKRLKKSVNERFEEASIGTATAVTEQTQYPPPQDFTSIVPRAETSLDP 1505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g00861 1505 MobiDBLite consensus disorder prediction 1476 1497 - -
Adu06g00861 1505 Pfam Helicase conserved C-terminal domain 1181 1290 IPR001650 -
Adu06g00861 1505 MobiDBLite consensus disorder prediction 66 86 - -
Adu06g00861 1505 SMART ultradead3 559 754 IPR014001 -
Adu06g00861 1505 Gene3D - 1150 1390 IPR027417 -
Adu06g00861 1505 MobiDBLite consensus disorder prediction 1390 1505 - -
Adu06g00861 1505 Coils Coil 412 451 - -
Adu06g00861 1505 Coils Coil 489 516 - -
Adu06g00861 1505 PANTHER CHROMATIN-REMODELING ATPASE INO80 16 1468 IPR031047 GO:0005634|GO:0006281|GO:0006338|GO:0006351|GO:0016887|GO:0031011
Adu06g00861 1505 MobiDBLite consensus disorder prediction 43 65 - -
Adu06g00861 1505 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 546 791 IPR027417 -
Adu06g00861 1505 CDD SF2_C_SNF 1169 1301 - -
Adu06g00861 1505 Gene3D - 801 871 IPR027417 -
Adu06g00861 1505 Pfam SNF2-related domain 578 865 IPR000330 GO:0005524|GO:0140658
Adu06g00861 1505 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 1181 1331 IPR001650 -
Adu06g00861 1505 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 793 1358 IPR027417 -
Adu06g00861 1505 MobiDBLite consensus disorder prediction 1390 1405 - -
Adu06g00861 1505 MobiDBLite consensus disorder prediction 1406 1421 - -
Adu06g00861 1505 PANTHER HELICASE SRCAP-RELATED 16 1468 - -
Adu06g00861 1505 MobiDBLite consensus disorder prediction 32 86 - -
Adu06g00861 1505 ProSiteProfiles DBINO domain profile. 337 465 IPR020838 GO:0003677
Adu06g00861 1505 SMART helicmild6 1207 1290 IPR001650 -
Adu06g00861 1505 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 575 746 IPR014001 -
Adu06g00861 1505 Pfam DNA-binding domain 332 463 IPR020838 GO:0003677
Adu06g00861 1505 Gene3D - 559 800 IPR038718 -
Adu06g00861 1505 MobiDBLite consensus disorder prediction 118 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g00861 Adu-Chr6 10495134 10505141 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g00861 616 864 RAD5 or RAD16-like Gene Family AT1G61140 23.871 2.73e-11 66.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SNF2 Adu06g00861 SNF2_N 3.6e-66 CL0023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g00861 K11665 - gmx:100780615 2403.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu06g00861 06 10495134 10505141 Adu06g00861 06 10495134 10505141 ECH