Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g00847 ATGGTAGTGGTTGTGGTGGTGGCGGGTGGTGGTGATGAAGAGTGTGATTGTGGTTCGATGGTGGAAAGTGTGGCAAGTGGGAATCAGAAGAGGAAGAGTTTTGTAGCAGTGAAGGTTTTGGATTCATATGCATCTTCGGCGATGGCGGAGACTTCGCCAGAGGTGGGTTGGAGAAAGGTAGCGTGTTGTTGGATGGGATGTGACGTCCTCCGCTGTCGCCGCCGCCGCTCGCGTCACACGAGCTCCCTCCACCGTCGCTCTCATCGCGTTTGCTCCATTCGTCGCCATCGTCGCACGAGCTCTCTCTACCATGCTCTTGTCTTACGAGCTCCCTCCGCCGCCGCTCTCGTCGCTGCTTCTTCTCTCCTCGCCGGAGGTTTGTCATCGTCTCTTCTCGTCACCGTTAGTTCAGTTGAAAATCAAAGAATACGATCGAGGAGAGCTCTTATGTTTGCAAATCAGTTATTGCTGCTACAAAGAACTGAGTTTCTAAATTCTAAGGTTCTCCAGGAGCTTAACCATCCCATTGTATATTCTCTATCTCCTGGAACTAGTGTGACACCAACATTGGCCAAGGATGTCAATGAGCTAGTAAACATGTATCGTATAATAAGAGATGACTGGGATAACTGGGCTAATGTCAAATCTCATTTTGATGTATCAAGCTTCTCTTACTGGGTTCTGTTAGCCATCACCGTATTATGTAACTCGAATTCACTTAATTTTGAATCAGAGATTCAGCTGCAGCTAGCGCTGCTACCACTGTTTGATCCTCCCAGGCATGATAGCGCTGAAACCATCACAAGAGCCCTGAACCTTGGTGTTAATGTGAAAATGATTACTGACCCATATGTTGAGGTAATAGCTTTATCTCCGAAATCTCTCTTAGCAACAAACAGATTCACGTGTGAGATATGCAACAAAGGGTTCCAGAGAGACCAAAACCTACAACTCCACAAAAGAGGCCACAACCTACCATGGAAGCTGAAGCAGAGAACAAGCAAAGAGATAAGGAAGAAAGTGAAGCACGGTGAGAAGAAGTGGAAGTGTGAGAAATGTTCAAAGAAGTATGCAGTTCAATCTGATTGGAAAGCGCATTCCAAGACATGTGGCACTAGAGAGTACATATGTGACTGTGGAACTCTCTTCTTAAGGAAAGACCCATCCTTCAAACCACAAGGTGGCCAGTTAAGGGAAAATGATATGGACTATGATACTGATGAGAATTCAATGGCAACACTTAGACGTCATCTTCGGGGAGCTACCGAGGAGTACTACAGATATAAAAGTCAGAAGATGCCAAGATCAACTTTTAATGTGGAGCTTGATGCTGCCAATGCAAGTTGGTTATTCATTAATATTTTAGATTGTTCTATCTTGTGTAATTTGTAA 1392 0.4519 MVVVVVVAGGGDEECDCGSMVESVASGNQKRKSFVAVKVLDSYASSAMAETSPEVGWRKVACCWMGCDVLRCRRRRSRHTSSLHRRSHRVCSIRRHRRTSSLYHALVLRAPSAAALVAASSLLAGGLSSSLLVTVSSVENQRIRSRRALMFANQLLLLQRTEFLNSKVLQELNHPIVYSLSPGTSVTPTLAKDVNELVNMYRIIRDDWDNWANVKSHFDVSSFSYWVLLAITVLCNSNSLNFESEIQLQLALLPLFDPPRHDSAETITRALNLGVNVKMITDPYVEVIALSPKSLLATNRFTCEICNKGFQRDQNLQLHKRGHNLPWKLKQRTSKEIRKKVKHGEKKWKCEKCSKKYAVQSDWKAHSKTCGTREYICDCGTLFLRKDPSFKPQGGQLRENDMDYDTDENSMATLRRHLRGATEEYYRYKSQKMPRSTFNVELDAANASWLFINILDCSILCNL 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g00847 463 Pfam Zinc-finger double-stranded RNA-binding 301 323 IPR022755 -
Adu06g00847 463 SMART c2h2final6 348 368 IPR013087 -
Adu06g00847 463 SMART c2h2final6 301 323 IPR013087 -
Adu06g00847 463 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 282 341 - -
Adu06g00847 463 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 342 387 - -
Adu06g00847 463 SUPERFAMILY beta-beta-alpha zinc fingers 300 368 IPR036236 -
Adu06g00847 463 Gene3D Classic Zinc Finger 298 370 - -
Adu06g00847 463 PANTHER PROTEIN INDETERMINATE-DOMAIN 7 342 387 - -
Adu06g00847 463 PANTHER PROTEIN INDETERMINATE-DOMAIN 7 282 341 - -
Adu06g00847 463 ProSiteProfiles Zinc finger C2H2 type domain profile. 301 323 IPR013087 -
Adu06g00847 463 Gene3D Aldolase class I 157 232 IPR013785 -
Adu06g00847 463 ProSitePatterns Zinc finger C2H2 type domain signature. 303 323 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g00847 Adu-Chr6 10230591 10236894 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g00847 276 387 IDZ Gene Family AT5G66730 65.248 2.30e-59 201
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Adu06g00847 zf-C2H2_jaz 6e-05 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g00847 K25870 - ahf:112800918 201.445