Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g00844 ATGGCGCGAAAACAAAAACCTGGGGCTCCAGAACCAAAACCAAAACCTTTGTCTCCAATCTCCATCGGTAACTGCGAGATCACTGTTGAGGCCAAAAACTTCACATGCAAATCCGAATCAAACAGCACCGTAATCTCTCTCCCGAGAAACGGGAAGATAATAGTATCAGTGGCACAAGAAGAGTATGCGAACAATGGAAATGCTACTGGGGATTTAAATTCCGATGATAGAGAACATGAGTTCATGCTTGTTAGTCCTAAAGATGATGCTGGGATAAGCAAATCCTACCTTCAGGAAGTTCTAGAGATGTACAAGGCAGAGCTACCAGGAATGAATTATGCTGCTAATACTGGAAAGCAATCAAAATTTCTTGAAAGATGTGTGACCAATGGGAAATATCGAACACTACTTCTTAATTCCAGTTCTGTTGAAGATTCCGGAAAGGTTATAGCTGCTATTACATATCAAATCATCCCTGCAGATACAGAATATGCAGAGATCCCACTTACAGCTGTGAGGGAAATCTACCAACGGAAGGGTTTTGGCCGTCTGTTGTTTCTGGAGCTACAGAAGAGACTTCAAAATATTGGTGTTCGTTCCATTTTCTGCTGGGGAGACAAAGAATCAGAAGGATTTTGGCTTAAACAGGGTTTTATATCAATAGCACAGGTTGATGCCAAAGGTAAAGCCCGCAGGTTTCCTGTAAAAGCTAGTATTCGCAAAGCATTATGCTTTCCTGGTGGTTCAACTCTCATGGCTTGCCATCTAAGGACAGAATTCTCAGCTGATGCAGCTGACTCTATGCACTGTCTTCCTTCACCTCTCTGTCATCATTCCTTGACACCTGCCATTGCTGAAAATGAGCAGCTGAAATGTTCAGGATTGCTGCACATTGATTTGAACCTGTCTAATCATTCAACCCATATCCTAGAAAGTAAAGATAAAAGTCAAGCTGAAGGTTTGATGAAAGCTGGATCGTCAAGAGAATATGGCAAACTGTGTGGGCTTGACAGTCACAATCTCGAACATGGCCGCAGTGACATTTTTCCTTTTGTCAGAGCATATGAGGACAGAAATGCTACTGCTGCAGAAAATTCACAGGATGAAATTGATGATAACATGAAGCTTTGTCATCTTTTTCCAAAAGGTGCAAAAAGGGGCTGGGAATCCTCTATATCCTCATTGAAATCTAAAAGGGTGAAGGGAAGCCAGTTGGCTGACTGTCGATCAGATTCTAGCGACGGTTTTACATCAGAGGCTAATAGGCCCAATCCTTGTTTTCAAGAAGTCCCTCGCGTTGATCCTCTGAGTGCAGAAGTTTCTGAGAAATATATGGAGGATCATGTACAATTAGAAGCACCCAACGACAAGGAACTGCCGTCAACTAAACAATCCTTTAGAATTATGTTAATGAATATTGCAGATGATACTAAGAGAACACAGCTTTCAAAGGTTATTGAAGACCTTGGTGGAACTGTTGCGTATGATGGAAGCATGGTAACACATGTTGTCACAGGAAAAGTGAGGAAAACTATGAATTTCTGCACTGCTCTCTGTTCTGGGGCTTGGGTGCTCTCATCAAGTTGGTTAAAGCAAAGCTTTCGTGAAGGCAGATTCGTCGATGAGTTGCCTCACATACTGAATGATGAGGAGTACATGCTGAAGCACAAATCTGATTTAAAAAGTGCAATCTTCCGAGCAAAAGCTAGCCCCCATTCTTTGTTTAAGGGCTACAATGTATGCATTGCAGCTCATGTTCGAACTCCTGCTGACACTCTATCTGCTATTGTCAGGTCTGCTGGTGGTAATGTTATCAATGGGCTGGAAAAAGTAAATGAGACATCAACAACAATCTTTGTGACATGCGAAGAAGATACAGAAGAAGCAATGATGGCTGCAAAGAAAGGAATCCGGACTTTCAGCAGTGAGTGGTTTATGAACTGTGTTATGAGACAGGAGCTTGACTTGCAGGCCTCCCAATTCGCTCAGTCCTTATGA 1998 0.4234 MARKQKPGAPEPKPKPLSPISIGNCEITVEAKNFTCKSESNSTVISLPRNGKIIVSVAQEEYANNGNATGDLNSDDREHEFMLVSPKDDAGISKSYLQEVLEMYKAELPGMNYAANTGKQSKFLERCVTNGKYRTLLLNSSSVEDSGKVIAAITYQIIPADTEYAEIPLTAVREIYQRKGFGRLLFLELQKRLQNIGVRSIFCWGDKESEGFWLKQGFISIAQVDAKGKARRFPVKASIRKALCFPGGSTLMACHLRTEFSADAADSMHCLPSPLCHHSLTPAIAENEQLKCSGLLHIDLNLSNHSTHILESKDKSQAEGLMKAGSSREYGKLCGLDSHNLEHGRSDIFPFVRAYEDRNATAAENSQDEIDDNMKLCHLFPKGAKRGWESSISSLKSKRVKGSQLADCRSDSSDGFTSEANRPNPCFQEVPRVDPLSAEVSEKYMEDHVQLEAPNDKELPSTKQSFRIMLMNIADDTKRTQLSKVIEDLGGTVAYDGSMVTHVVTGKVRKTMNFCTALCSGAWVLSSSWLKQSFREGRFVDELPHILNDEEYMLKHKSDLKSAIFRAKASPHSLFKGYNVCIAAHVRTPADTLSAIVRSAGGNVINGLEKVNETSTTIFVTCEEDTEEAMMAAKKGIRTFSSEWFMNCVMRQELDLQASQFAQSL 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g00844 665 CDD BRCT_PAXIP1_rpt6_like 574 655 - -
Adu06g00844 665 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 82 240 IPR000182 GO:0016407
Adu06g00844 665 Pfam Regulator of Ty1 transposition protein 107 BRCT domain 457 545 IPR001357 -
Adu06g00844 665 PANTHER PAX TRANSCRIPTION ACTIVATION DOMAIN INTERACTING PROTEIN 13 665 - -
Adu06g00844 665 CDD NAT_SF 143 204 - -
Adu06g00844 665 Gene3D BRCT domain 454 571 IPR036420 -
Adu06g00844 665 SUPERFAMILY BRCT domain 466 551 IPR036420 -
Adu06g00844 665 SMART BRCT_7 460 537 IPR001357 -
Adu06g00844 665 SMART BRCT_7 572 652 IPR001357 -
Adu06g00844 665 Pfam BRCA1 C Terminus (BRCT) domain 571 649 IPR001357 -
Adu06g00844 665 SUPERFAMILY BRCT domain 569 654 IPR036420 -
Adu06g00844 665 PANTHER N-ACETYLTRANSFERASE 13 665 - -
Adu06g00844 665 MobiDBLite consensus disorder prediction 1 21 - -
Adu06g00844 665 ProSiteProfiles BRCT domain profile. 570 654 IPR001357 -
Adu06g00844 665 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 143 223 IPR016181 -
Adu06g00844 665 Gene3D BRCT domain 572 664 IPR036420 -
Adu06g00844 665 Gene3D - 78 259 - -
Adu06g00844 665 ProSiteProfiles BRCT domain profile. 458 547 IPR001357 -
Adu06g00844 665 Pfam Acetyltransferase (GNAT) family 143 218 IPR000182 GO:0016407
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Adu06g00844 RTT107_BRCT_5 1.6e-06 CL0459
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g00844 - - aip:107645523 1308.12
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu06g00844 06 10197531 10203496 Adu06g00844 06 10197531 10203496 ECH