Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g00823 ATGGGGATGGCTGCTGCAGCTGCTACAGAGTCACAGCAGTTTCATGTGTTGGCTGTTGATGACAGCCTCATAGATAGAAAGCTTATTGAGAGGCTCCTAAGAACTTCTTCTTACCAAGTTACTACAGTTGATTCTGGGACCAAAGCTTTAGAATTTCTGGGCTTGCGTGAGAATGATGATGGCACCCCAAATACACCTTCTATTTCTCCTAACAATCATCAGGAGGTGGAGGTGAATATGGTTATAACAGATTACTGTATGCCTGGGATGACTGGCTATGATTTGCTCAAGAAAATCAAGGAATCTTCATCTCTTAGAAACATACCAGTGGTGATTATGTCATCAGAGAATGTGCCTTCAAGAATTAGCAGGTAA 375 0.4213 MGMAAAAATESQQFHVLAVDDSLIDRKLIERLLRTSSYQVTTVDSGTKALEFLGLRENDDGTPNTPSISPNNHQEVEVNMVITDYCMPGMTGYDLLKKIKESSSLRNIPVVIMSSENVPSRISR 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g00823 124 ProSiteProfiles Response regulatory domain profile. 15 124 IPR001789 GO:0000160
Adu06g00823 124 PANTHER TWO-COMPONENT RESPONSE REGULATOR 8 124 IPR045279 GO:0009736
Adu06g00823 124 SUPERFAMILY CheY-like 13 118 IPR011006 -
Adu06g00823 124 Gene3D - 7 124 - -
Adu06g00823 124 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR9-LIKE 8 124 - -
Adu06g00823 124 CDD REC_typeA_ARR 16 124 - -
Adu06g00823 124 Pfam Response regulator receiver domain 16 118 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g00823 Adu-Chr6 9895221 9896295 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g00823 1 124 Response Regulator Gene Family AT3G57040 75.200 1.81e-62 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Adu06g00823 Response_reg 8.6e-14 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g00823 K14492 - gmx:100788079 205.682
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu06g00823 06 9895221 9896295 Adu06g00823 06 9895221 9896295 ECH