Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g00808 ATGTCTTCTACACTTGAGGAATCTCTAAGATCTCTATCGTTGGATTACCTCAACCTGCTCATCAACGGTCAGGCCTTCAGCGACGTCACCTTCAGCGTCGAGGGGCGTCTAGTACACGCGCACCGCTGTATCCTGGCGGCAAGAAGTCTATTCTTCAGGAAATTCTTCTGCGGGCCCGACCCTCCTTCGCCCTCTGGCCTCGATCCTCCAGGACAGAGGATGAACTCGGGGTCGGGCTGCAGAACCCCTACAGGGGTAATACCCGTGAACTCCGTGGGGTACGAGGTGTTCCTGCTCATGCTGCAGTTTCTGTACAGCGGGCAGGTATCCATCGTCCCCCAGAAGCACGAGCCACGGGCCAATTGCGGCGAGAGGGGCTGCTGGCACACGCATTGCTCCTCCGCCGTCGATCTTGCTCTAGACACACTCGCCGCCGCTAGATACTTCGGCGTTGAGCAGCTCGCATTGCTAACTCAGAAACAACTAGCAAGCATGGTGGAGAAAGCTTCCATTGAAGATGTGATGAAGGTCTTGGTAGCTTCAAGAAAGCAAGACATGCACCAACTGTGGACCACATGCTCCCACCTTGTAGCCAAATCCGGTCTCCCACCGGAGGTTCTCGCCAAGCACCTCCCCATCGACATCGTCGCCAAAATCGAAGACCTCCGTCTAAAATCCTCCCTCGCCCGCCGTACCGCCGCCTTCCTCCCCCACCACCACCACCCGGACCTCTCCGCCGCGGCAGACCTCGAGGACCAAAAGATCCGCCGGATGAGGCGAGCGCTAGACTCATCCGACGTGGAGCTCGTAAAGCTAATGGTAATGGGAGAAGGGCTCAATCTCGACGACGCATTAGCTCTGCATTACGCCGTCGAGAATTGTAGCCGCGAAGTGGTGAAAGCGCTGCTGGAACTCGGGGCAGCCGATGTCAACTATCCCGCAGGTCCAGCAGGAAAAACACCACTTCATATCGCGGCGGAAATGGTTTCGCCCGATATGGTAGCGGTCCTGCTGGACCACCACGCAGACCCAAACGTGAGAACCATCGACAACGTGACGCCATTGGACACACTAAGAACCCTAACCTCCGATTTTCTGTTCAAAGGCGCAGTCCCTGGCCTGACTCACATTGAACCAAACAAATTAAGGCTGTGTTTGGAGCTTGTTCAATCGGCGGCACTTGTTTTGTCTCGTGAAGAAGGTAACGCCAATAACAACAATGTTGCTTCTTCTACAACTCCACATCATCATCATATTTATCCTCCTTCCATGAACGAAGATCATCATAGCAGTTCAAGCAGTGGCGGCAACAATAACAATAACACCAACATTAACTTGGATTCCAGGTTGGTGTATCTTAACCTTGGTGCCACCTTAGGTGGTGGTGGTGGTGGCGGCGCCTCCGGTCAAATGAGTTCAAGGTTGGATGGTGATGATGATAACCGTCATGGTGAAGTAGCAATGTACCATCACCACCACCACCATCATCACCATTCTCATCATGACTTTTAG 1512 0.5384 MSSTLEESLRSLSLDYLNLLINGQAFSDVTFSVEGRLVHAHRCILAARSLFFRKFFCGPDPPSPSGLDPPGQRMNSGSGCRTPTGVIPVNSVGYEVFLLMLQFLYSGQVSIVPQKHEPRANCGERGCWHTHCSSAVDLALDTLAAARYFGVEQLALLTQKQLASMVEKASIEDVMKVLVASRKQDMHQLWTTCSHLVAKSGLPPEVLAKHLPIDIVAKIEDLRLKSSLARRTAAFLPHHHHPDLSAAADLEDQKIRRMRRALDSSDVELVKLMVMGEGLNLDDALALHYAVENCSREVVKALLELGAADVNYPAGPAGKTPLHIAAEMVSPDMVAVLLDHHADPNVRTIDNVTPLDTLRTLTSDFLFKGAVPGLTHIEPNKLRLCLELVQSAALVLSREEGNANNNNVASSTTPHHHHIYPPSMNEDHHSSSSSGGNNNNNTNINLDSRLVYLNLGATLGGGGGGGASGQMSSRLDGDDDNRHGEVAMYHHHHHHHHHSHHDF 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g00808 503 Pfam BTB/POZ domain 18 116 IPR000210 GO:0005515
Adu06g00808 503 MobiDBLite consensus disorder prediction 425 443 - -
Adu06g00808 503 ProSiteProfiles BTB domain profile. 27 113 IPR000210 GO:0005515
Adu06g00808 503 Gene3D - 248 365 IPR036770 -
Adu06g00808 503 ProSiteProfiles Ankyrin repeat profile. 317 349 IPR002110 GO:0005515
Adu06g00808 503 PANTHER REGULATORY PROTEIN NPR5 4 493 - -
Adu06g00808 503 MobiDBLite consensus disorder prediction 462 483 - -
Adu06g00808 503 CDD BTB_POZ_NPR_plant 10 166 - -
Adu06g00808 503 Gene3D Potassium Channel Kv1.1; Chain A 2 199 IPR011333 -
Adu06g00808 503 SUPERFAMILY Ankyrin repeat 276 359 IPR036770 -
Adu06g00808 503 SUPERFAMILY POZ domain 10 164 IPR011333 -
Adu06g00808 503 ProSiteProfiles Ankyrin repeat region circular profile. 317 347 - -
Adu06g00808 503 Pfam Domain of unknown function (DUF3420) 201 259 IPR024228 -
Adu06g00808 503 PANTHER BTB/POZ DOMAIN AND ANKYRIN REPEAT-CONTAINING PROTEIN NH5.2 4 493 IPR044284 GO:0099402
Adu06g00808 503 Pfam Ankyrin repeats (3 copies) 265 347 IPR002110 GO:0005515
Adu06g00808 503 SMART BTB_4 27 166 IPR000210 GO:0005515
Adu06g00808 503 MobiDBLite consensus disorder prediction 404 443 - -
Adu06g00808 503 SMART ANK_2a 317 346 IPR002110 GO:0005515
Adu06g00808 503 SMART ANK_2a 282 312 IPR002110 GO:0005515
Adu06g00808 503 MobiDBLite consensus disorder prediction 404 418 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g00808 Adu-Chr6 9751453 9754180 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Adu06g00808 BTB 2.7e-14 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g00808 K14508 - qsu:112012060 721.079
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu06g00808 06 9751453 9754180 Adu06g00808 06 9751453 9754180 ECH