Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g00772 ATGGTATTCAATGAATCACTTAGCTTCAATGGGAATCAGTTAGAAACATGCAGTTCCTTGTCCGAGAAGAAATTCCAAACACCATCGCAAGTGTCGCGGAGTGAAATGGATGAAGCTGCGCTTAAGTTGCAGAAAGTTTACAAGAGTTTCCGAACAAGGAGGCAACTAGCAGATTGTGCAGTCCTTGCTGAACAGAGATGGTGGAAAGTTTTAGATTTTGCTGAGCTAAAACATAGTTCTATCTCATTTTTTGAGAAGCAGGAGACTGCTGTTTCGCGTTGGTCTAGAGCAAGAACCAGAGCTGCCAAGCTTGGAAAGGGTCTATCGAAGGATGAGAGGGCTCGAAAACTTGCTTTGCAGCACTGGCTTGAAGCTATTGACCCGAGGCATCGCTATGGCCACAATCTTCAATTCTATTATGTTAAATGGCTCCAATGTGACAGTTATCAACCTTTCTTCTATTGGCTTGATGTTGGGGAAGGCAAGGAAGTGAGTGATGAGAGATGTTCAAGATCAAAGCTTCAGCAGCAATGCATCAAGTATTTGGGTCCAGAGGAAAGAAAGATTTATGAAGTGGCTATTGAGGATGGAAGACTATTTTATAAGCAAAGTGGGGAATCTATTAATACAACAAGAGATTTAAAGTGGATTTTTGTGCTTAGCACATCAAAGACATTATATATTGGGCAGAAGAACAAGGGTACATTTCAACATTCAAGTTTCTTAGCAGGTGGTGCTACACTATCTGCTGGTAGATTAGTGGTGGATGATGGTGTTATTAAGGAAGTTTGGGCTCACAGTGGACATTATCTCCCAACAGAGGAAAATTTCCAGGAATTCATGTCATTCCTTGAGGAGCATAATGTGAAACTCACAGATGTAAAGAAACACGGAATAGACCATGAAGAAGAAGATAAAGCCAAAATGAACAACGGAATTTGCTTGGGAGACAATCCTTTAGAGGCATACTTAACTTCAGCCCAAGAACTAGTTCTACCTGACATGGAAAATGAAGATTGTAATGCTGAGTTAGATTTTCATGCACCCTTGTCAAGATTGACATCAAAACTAGGATCAGAAATGGACAATGTGTCTGACAATTTTGAAGAGCAAGTATACACGCCGAATGGCGATGATCCTTCTCTAGAAGAAAGTGGCTATGGGACAGCAGAAGAGTCCTTTACTGATGAGGAGGAATTCATGGTTCCGAAATCCCACTTGTTTGAAGAACAAGAAGAGGAAGAGAATGAAAGACATATCCCAAAAGAAAACATAATGAAGAGAATAGATTCACACAAAGGAATGAAGTCATGTCAGTTGGGCAATCACTTATCCACTGAATGGAGAACAGGTTCTGGTTCAAGAATTGGTTGCTTGAGAGACTACCCTGCAAAGCTTAGTTTTAGGATTCCAGAGCATCAACATTTGTCTCCAAGGAGAGGAAGAACTACTCCATCTCATAGTGTCTTACAAGCATTTCATTTAAGCCTTGCACATCTAGATTTTGTCCATGCAATTTCTGCAGCTGATCTGAAACTAGGGTTTATCTCACAACGGTGGAGCTGCAACAAGAGCGAGAGAGCTTTGAAGCTTAGGCCGCCTCCTTCTCCTCTTCCTCCGCCACCTCGTCTGTGCCACAAGATGGATTCTGGGATTAAGCATGCTGTTGTTGTGAAAGTTATTGGCCGTACTGGATCCAGAGGTCAGGTGACTCAGGTTAGAGTGAAGTTCTTGGATGATCAGAACCGTCACATTATGAGGAATGTGAAGGGACCAGTTAGAGAAGAAAACGATTTTATAAATAGCTTAAAACTAGGGTTTATCACACTACAGCGGAGCTGCAACAAGAGCGAGAGAGCTTCGAAGCTTAGTGCCGCCTCCTTCTCCTCAACCATGGCTGCTGCTGCTGCTGCTGCTGCTCCTACCGAAGTTGATCCCACACAGCTCGACGTTAAGCTCTTCAACAGATGGAGCTTCGACGATGTCCAGGTGACTGATATCTCCCTGGCTGATTACATTGGAGTGGTGCCGTCGAAGCATGCGACGTACGTTCCCCACACCGCCGGTAGGTACTCAGTGAAGCGTTTCAGGAAGGCACAGTGCCCGATCGTTGAGAGGCTCACTAACTCCCTTATGATGCATGGAAGAAACAACGGTAAGAAGCTTATGGCTGTTAGGATCATCAAACACGCCATGGAAATCATTCACTTGCTTACAGACCAGAACCCTATCCAAGTCATCGTTGATGCCGTTATCAACAGTGGTCCTCGTGAAGATGCAACTCGTATTGGGTCTGCTGGAGTTGTTAGGAGGCAGGCTGTTGATATCTCGCCTCTTCGCCGTGTCAATCAGGCCATCTATCTTCTAACAACAGGTGCACGAGAAGCTGCTTTCAGGAACATTAAGACAATTGCCGAATGCTTGGCTGATGAACTTATTAACGCAGCAAAAGGTTCATCCAATAGCTATGCTATCAAGAAAAAGGATGAGATAGAGAGAGTCGCCAAGGCTAATCTTGGCAAACCTCAGAATTCTTCTGTTTCAAATACTCTTTTAAGTACCTATGTATTCAATAAAAAAGTTGGTAAGCGTACGAGGCTTCTGGAATTGTTTGCAGTTGGATCAGATCCTCCAAACATGCGTCCCAATATCGTTTCTGAGGCTGGGGTTTCTACTAGGTTGAATCAATATTGGGAAAGCATTCCGTTCCTCACTTCTGCTATTGTGGTTCTTTGTGGAATTATTTACTTGGTTTGTTTATTGGTTGGATATGATTCATTTGCTGAGGTATGCTTTTTGCCGTCTGCTGTTGTATCACGTTTTCAAGTTTACAGGATTTATACCTCCATTCTTTTTCATGGTTCGCTGCTTCATGTTCTCTTCAACATGATGGCCTTAGTTCCCATGGGATCTGAGATGGAGAGGGTCATGGGTTCAGTTCGCCTGCTATATGTCACGATTTTGTTGGCCACGAGCAATGCTATATTCCACATTCTCGTAGCACTGCTGGTGGCACACAATCCTATTCAATCGTCAGAATACTTCATGAATGAGTGTGCTATAGGCTTCTCGGGAGTTCTGTTTTCCATGATTGTTATTGAGACAAGCCTGAGTGGAGCTCAATCTCGGAGTGTTTTTGGCTTGTTTAACGTCCCGGCAAAATGGTATCCATTCCTTTTGCTAGTGGTGTTCCAGCTTCTCATGGAGAATGTCTCACTTCTTGGACACCTTTGTGGCATTATATCTGGGTTTGCATATACATATGGCTTGTTCAATATCCTAATACCTGGGACATCTTTTTATTCTTCCATTGAAGCTTCATCCTTGCTTTCATCGTGTGTGAGACGTCCTAAATTTATTGTTTGCACTGGTGGAAATACTTCGGGTTATATACCTACACATACAAGCCGAAATTCAACTTCTGGTGGAATACTTTCTGGAAATGTTTGGAGAAACCTATCATCATTGATGCCGCAAAGAGAAGTGTCTGCCGCACAGCCAACTGAGGACAGTAGGTTCCCTGGGAGGGGAAGGACCCTTGGTTCTGGTCAAGGTCAAGCAGCTTCTGCTCTAAATTCAGATTCAAGTCTTCAAGCTAGACTCTTGGATAATAGCAGCCCTGATCAACCTTTAGACTCATCTGCTCACAGCACTGCTCAACAGTTATCAGGAGGAAGGAATTCAGCTGGTAATGTAGCAACAGTGGCTGCTAATGTTCCACAGCATCAGGGTGCAACTGCTTCAGAAGAGGAGATTAAGAAACTGGTATCAATGGGCTTTGACAGGACACAGGTGGAGGTAGCACTGGCAGCTGCTGAAGGTGATCTTAATGTGGCAGTGGAAATACTAATGAGCCAGCAGGTCCTAATCTAA 3873 0.4358 MVFNESLSFNGNQLETCSSLSEKKFQTPSQVSRSEMDEAALKLQKVYKSFRTRRQLADCAVLAEQRWWKVLDFAELKHSSISFFEKQETAVSRWSRARTRAAKLGKGLSKDERARKLALQHWLEAIDPRHRYGHNLQFYYVKWLQCDSYQPFFYWLDVGEGKEVSDERCSRSKLQQQCIKYLGPEERKIYEVAIEDGRLFYKQSGESINTTRDLKWIFVLSTSKTLYIGQKNKGTFQHSSFLAGGATLSAGRLVVDDGVIKEVWAHSGHYLPTEENFQEFMSFLEEHNVKLTDVKKHGIDHEEEDKAKMNNGICLGDNPLEAYLTSAQELVLPDMENEDCNAELDFHAPLSRLTSKLGSEMDNVSDNFEEQVYTPNGDDPSLEESGYGTAEESFTDEEEFMVPKSHLFEEQEEEENERHIPKENIMKRIDSHKGMKSCQLGNHLSTEWRTGSGSRIGCLRDYPAKLSFRIPEHQHLSPRRGRTTPSHSVLQAFHLSLAHLDFVHAISAADLKLGFISQRWSCNKSERALKLRPPPSPLPPPPRLCHKMDSGIKHAVVVKVIGRTGSRGQVTQVRVKFLDDQNRHIMRNVKGPVREENDFINSLKLGFITLQRSCNKSERASKLSAASFSSTMAAAAAAAAPTEVDPTQLDVKLFNRWSFDDVQVTDISLADYIGVVPSKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKANLGKPQNSSVSNTLLSTYVFNKKVGKRTRLLELFAVGSDPPNMRPNIVSEAGVSTRLNQYWESIPFLTSAIVVLCGIIYLVCLLVGYDSFAEVCFLPSAVVSRFQVYRIYTSILFHGSLLHVLFNMMALVPMGSEMERVMGSVRLLYVTILLATSNAIFHILVALLVAHNPIQSSEYFMNECAIGFSGVLFSMIVIETSLSGAQSRSVFGLFNVPAKWYPFLLLVVFQLLMENVSLLGHLCGIISGFAYTYGLFNILIPGTSFYSSIEASSLLSSCVRRPKFIVCTGGNTSGYIPTHTSRNSTSGGILSGNVWRNLSSLMPQREVSAAQPTEDSRFPGRGRTLGSGQGQAASALNSDSSLQARLLDNSSPDQPLDSSAHSTAQQLSGGRNSAGNVATVAANVPQHQGATASEEEIKKLVSMGFDRTQVEVALAAAEGDLNVAVEILMSQQVLI 1290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g00772 1290 PANTHER IQ DOMAIN-CONTAINING PROTEIN IQM3 13 491 IPR044159 -
Adu06g00772 1290 Pfam Rhomboid family 939 1092 IPR022764 GO:0004252|GO:0016021
Adu06g00772 1290 Pfam Ribosomal protein S7p/S5e 694 838 IPR023798 -
Adu06g00772 1290 SUPERFAMILY Rhomboid-like 899 1092 IPR035952 -
Adu06g00772 1290 Gene3D - 1221 1288 - -
Adu06g00772 1290 Gene3D Ribosomal protein S7 domain 632 838 IPR036823 -
Adu06g00772 1290 SUPERFAMILY UBA-like 1243 1286 IPR009060 GO:0005515
Adu06g00772 1290 SUPERFAMILY Ribosomal protein S7 652 838 IPR036823 -
Adu06g00772 1290 Pfam UBA/TS-N domain 1249 1283 IPR015940 -
Adu06g00772 1290 CDD uS7_Eukaryote 652 838 IPR005716 GO:0003735|GO:0006412|GO:0015935
Adu06g00772 1290 SUPERFAMILY Nucleic acid-binding proteins 549 596 IPR012340 -
Adu06g00772 1290 Pfam Ribosomal protein S28e 552 596 IPR000289 GO:0003735|GO:0005840|GO:0006412
Adu06g00772 1290 Gene3D - 895 1092 IPR035952 -
Adu06g00772 1290 CDD S1_S28E 553 595 IPR000289 GO:0003735|GO:0005840|GO:0006412
Adu06g00772 1290 TIGRFAM uS7_euk_arch: ribosomal protein uS7 651 838 IPR005716 GO:0003735|GO:0006412|GO:0015935
Adu06g00772 1290 CDD UBA_At3g58460_like 1249 1284 - -
Adu06g00772 1290 MobiDBLite consensus disorder prediction 1160 1189 - -
Adu06g00772 1290 MobiDBLite consensus disorder prediction 1201 1228 - -
Adu06g00772 1290 PANTHER IQ DOMAIN-CONTAINING PROTEIN IQM6 13 491 - -
Adu06g00772 1290 SMART uba_6 1248 1285 IPR015940 -
Adu06g00772 1290 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 1246 1286 IPR015940 -
Adu06g00772 1290 Gene3D - 546 602 IPR012340 -
Adu06g00772 1290 ProSitePatterns Ribosomal protein S7 signature. 705 731 IPR020606 GO:0003723|GO:0003735|GO:0006412
Adu06g00772 1290 MobiDBLite consensus disorder prediction 370 395 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g00772 Adu-Chr6 9314157 9328559 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g00772 632 838 Cytoplasmic Ribosomal Protein Gene Family AT2G37270 88.406 1.28e-122 376
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g00772 - - ahf:112695909 791.571
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu06g00772 06 9314157 9328559 Adu06g00772 06 9314157 9328559 ECH