Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g00736 ATGACAGGGGCAGTGATGGTGAGCAAGGGCGCTGGATGCGGTGGTGGTAGGCGAGCGTCGGAGCAAGATGACGACGAACAGAACCAGCTGTCTCCGGTGGCGGTTCTTTTGGCGGCGCTTAGGAAATCAATGGTGGCTTGCAGTGTAGACAGTCCCAAAGATGTGATATCGAATACCGTTCATCAAATGGAGATTGGATGGCCCACAAACGTTAAGCACGTTAGTCATGTCACCTTCGATCGCTTCAATGGCTTCCTTGGTCTTCCCGTTGAGTTAGAGGTTCATGTTCCCGCTCCTGTTCCCAGTGCTAGTGTTAGTATTTTTGGTGTCTCAGCTGAATCAATGCAATGTTCTTATGATTCAAAAGGAAACAGTGTCCCCACTATTCTCTTGCTAATGCAGGAGCGATTATACTCACAGGGAGGCCTAAAGGCTGAAGGTATATTTAGGATAAACCCGGAAAACGGTGAAGAGGGGCTATTAAGGGACCAGCTGAACAGAGGCATTGTGCCGGAAGACATTGATGTTCATTGCTTGGCAGGGCTAATTAAAGCTTGGTTGCGAGAACTTCCTTTGGGAGTGCTCGATGGACTTTCCCCTGAACAAGTTCTTCAGTGCAATACAGAAGAAGATGAGCTTGTGAAGCAGCTAAAGACAACTGAGTCAGCCTTGCTCAACTGGGCCATTGATCTCATGACTGATGTTGTTGTAGGAATTTCTCCGTCGCTTCTGCTTTGTCGCCGCTCGCTTGCACGAGCTCCCTCGGTCACTGCTTGCTTGCACGAGCTCCCTCCGCCGCCGCTCGCTCGCATGAGCTCCCTCCTCTGCTGCTCGCGTTACACGAGCTCCCTCTGCCGCCTCTCAGCTTATAGTTCTGCTTCCGAGGTTGGGACTCCAATTTGTATTCCTTCTAGAGACTTCATTGACATTGGCCGCATTGCCTCCATTGAAAATAACCACACGCCAGTTGATTATGCAAAGAAAGGGCTGAAAGGAGCTATTAAGAATGTTGAAGTATTCGTGGACGCATTTAGAGCAGTAATTGAAGAGAGGATTAAAAACAAATGTCATGTTTTCTTGTCCCAGTATCTTCTATTCTCAATTTGGCTACGCAGGTTGGTTGCATAA 1128 0.4858 MTGAVMVSKGAGCGGGRRASEQDDDEQNQLSPVAVLLAALRKSMVACSVDSPKDVISNTVHQMEIGWPTNVKHVSHVTFDRFNGFLGLPVELEVHVPAPVPSASVSIFGVSAESMQCSYDSKGNSVPTILLLMQERLYSQGGLKAEGIFRINPENGEEGLLRDQLNRGIVPEDIDVHCLAGLIKAWLRELPLGVLDGLSPEQVLQCNTEEDELVKQLKTTESALLNWAIDLMTDVVVGISPSLLLCRRSLARAPSVTACLHELPPPPLARMSSLLCCSRYTSSLCRLSAYSSASEVGTPICIPSRDFIDIGRIASIENNHTPVDYAKKGLKGAIKNVEVFVDAFRAVIEERIKNKCHVFLSQYLLFSIWLRRLVA 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g00736 375 SMART PBD_5 65 99 IPR000095 -
Adu06g00736 375 Pfam P21-Rho-binding domain 64 92 IPR000095 -
Adu06g00736 375 SUPERFAMILY GTPase activation domain, GAP 106 243 IPR008936 GO:0007165
Adu06g00736 375 Gene3D CRIB domain 61 96 IPR036936 -
Adu06g00736 375 CDD CRIB 63 93 - -
Adu06g00736 375 MobiDBLite consensus disorder prediction 1 28 - -
Adu06g00736 375 Pfam RhoGAP domain 127 218 IPR000198 GO:0007165
Adu06g00736 375 PANTHER MKIAA1688 PROTEIN 1 237 IPR044785 GO:0005096
Adu06g00736 375 Gene3D Translation factors 290 353 - -
Adu06g00736 375 ProSiteProfiles Rho GTPase-activating proteins domain profile. 110 283 IPR000198 GO:0007165
Adu06g00736 375 SMART RhoGAP_3 124 268 IPR000198 GO:0007165
Adu06g00736 375 CDD RhoGAP 127 236 - -
Adu06g00736 375 PANTHER RHO GTPASE ACTIVATION PROTEIN-RELATED 1 237 - -
Adu06g00736 375 Gene3D Rho GTPase activation protein 97 266 IPR008936 GO:0007165
Adu06g00736 375 ProSiteProfiles CRIB domain profile. 65 78 IPR000095 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g00736 Adu-Chr6 8761160 8765484 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g00736 295 337 Eukaryotic Initiation Factors Gene Family AT1G76810 79.070 1.98e-15 76.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g00736 - K20642 adu:107472568 455.677
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu06g00736 06 8761160 8765484 Adu06g00736 06 8761160 8765484 ECH
Adu06g00736 06 8761160 8765484 Adu02g02431 02 89934567 89937850 PCT