Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g00732 ATGGCGGAAGCGAAGGAAGAGAGCAAATCTAGCGAGGAGAGTGTGAAGCTGTTCGTAGGTCAAGTTCCGAAGCACATGACGGAATCGGAACTGCTGGCAATGTTCAAGGAGTTCGCGTTGGTCGACGAGGTCAACATCATCAAGGACAAAGCCACGCGCTCCTCTCGAGGTTGTTGCTTCGTGATTTGTCCGTCGAGGGAAGAGGCTGATAAGGCCGTCAATGCGTGTCACAATAAGAAAACGCTGCCAGGGGCTTCTAGTCCATTGCAAGTAAAGTATGCTGATGGCGAGTTGGAAAGATTAGAACACAAACTCTTCATCGGAATGCTTCCAAAGAATGTTTCTGAAGTTGAAGTCTCTGCACTTTTCTCCAAGTTCGGAACTATAAAAGATTTACAAATTTTAAGAGGTTCTCAGCAAACAAGTAAAGGTTGTGCATTTTTGAAGTATGAAACCAAAGAACAAGCCCTTGCTGCTTTAGAGGCAATCAATGGAAAGCATAAAATGGAGGGTTCGAGTGTTCCTTTGGTAGTCAAATGGGCTGATACTGAAAAGGAAAGACAAGCCCGACGAGCTCAGAGAGCACAGTCCCAAGCTTCCAATGCGCCACATGCTGATTCTCAGCACCCATCATTGTTTGGAGCCTTGCCAATGGGTTATGTTCCTCCGTATAATGGATACGGTTACCAGGCTCCTGGAGGTTATGGGATCATGCCATACCGGATGCCACCGATGCAGAATCAACCTGGTTACCATAACATGATGCCGCACATGAATCAAGCAAATGCACTACGGCCCGAACTTGGCCCCAATATGAACCCAAGAAATTATCATGTGCCTCCTGCAAGTTATGTTGGCTCTTATCCTGCTGTTCCAGGCCTACAACATCCAATCGCATACGCAGGAGGCATGATTAGTCCAAGGCCTATGAGTAGTTCTCCTGGTTCTATTTCACCTGCAGGTGGTAATGGCAACTCTGGTACATCATCTTCAAGTGCTAGCAAGAGTTCTGGGGGTCAAGTTGAAGGTTGTTATAGATATATGTTATAA 1050 0.4638 MAEAKEESKSSEESVKLFVGQVPKHMTESELLAMFKEFALVDEVNIIKDKATRSSRGCCFVICPSREEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEVEVSALFSKFGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQRAQSQASNAPHADSQHPSLFGALPMGYVPPYNGYGYQAPGGYGIMPYRMPPMQNQPGYHNMMPHMNQANALRPELGPNMNPRNYHVPPASYVGSYPAVPGLQHPIAYAGGMISPRPMSSSPGSISPAGGNGNSGTSSSSASKSSGGQVEGCYRYML 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g00732 349 SUPERFAMILY RNA-binding domain, RBD 101 193 IPR035979 GO:0003676
Adu06g00732 349 SUPERFAMILY RNA-binding domain, RBD 9 97 IPR035979 GO:0003676
Adu06g00732 349 PANTHER RNA BINDING PROTEIN 7 315 - -
Adu06g00732 349 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 103 183 IPR000504 GO:0003723
Adu06g00732 349 MobiDBLite consensus disorder prediction 185 208 - -
Adu06g00732 349 MobiDBLite consensus disorder prediction 309 339 - -
Adu06g00732 349 PANTHER RNA-BINDING PROTEIN-DEFENSE RELATED 1-RELATED 7 315 - -
Adu06g00732 349 SMART rrm1_1 104 179 IPR000504 GO:0003723
Adu06g00732 349 SMART rrm1_1 16 92 IPR000504 GO:0003723
Adu06g00732 349 PRINTS Paraneoplastic encephalomyelitis antigen family signature 123 135 IPR002343 GO:0003723|GO:1990904
Adu06g00732 349 PRINTS Paraneoplastic encephalomyelitis antigen family signature 108 123 IPR002343 GO:0003723|GO:1990904
Adu06g00732 349 PRINTS Paraneoplastic encephalomyelitis antigen family signature 164 181 IPR002343 GO:0003723|GO:1990904
Adu06g00732 349 PRINTS Paraneoplastic encephalomyelitis antigen family signature 15 30 IPR002343 GO:0003723|GO:1990904
Adu06g00732 349 CDD RRM1_2_CELF1-6_like 16 92 - -
Adu06g00732 349 Gene3D - 99 192 IPR012677 -
Adu06g00732 349 MobiDBLite consensus disorder prediction 309 343 - -
Adu06g00732 349 CDD RRM1_2_CELF1-6_like 104 179 - -
Adu06g00732 349 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 15 96 IPR000504 GO:0003723
Adu06g00732 349 MobiDBLite consensus disorder prediction 193 207 - -
Adu06g00732 349 Gene3D - 2 98 IPR012677 -
Adu06g00732 349 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 105 168 IPR000504 GO:0003723
Adu06g00732 349 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 17 81 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g00732 Adu-Chr6 8682910 8686856 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g00732 4 250 Eukaryotic Initiation Factors Gene Family AT1G71770 26.441 9.37e-15 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g00732 K13207 - gmx:100813239 573.933
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu06g00732 06 8682910 8686856 Adu06g00732 06 8682910 8686856 ECH