Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g00716 ATGGCAGAGTTCTCTTCCGCATCAACTCTTCCAACTCCACCTGAATCTCAAACTAGACTACACTTTGGGAAATTGCAGCACGGGTGCGAACACTACAAGAGACGTTGCAAAATTCGAGCTCCATGCTGCAACCAGATCTTCTCTTGCCGTCACTGCCACAACGACGCCATGGTTATATGTTCTATCTGTGATACTGAGCAAGAGGCTGCCAAGGTCTGTGCTAACTGTGGCGTCAACATGGGAGAATATTATTGTGAAATTTGCAAATTTTATGATGATAATACAGAGAAAGGACAGTTCCATTGCGACGAATGCGGGATTTGTAGGGTTGGTGGTCGTGATAATTTCTTCCACTGTCCGACATGTGGCTCTTGCTATTCAGTGAACTTGCAAGGCAACCACCCGTGTGTGGAGAACTCAATGAAGAGTTTCTGTCCTGTCTGTTATGAGTATCTGTTTGATTCAATAAAAGGTACCACAATTATGACTTGTGGACACACAATGCATATGGATTGCTTTTATGAAATGGCAGAGCAAAATCAGTATCGCTGTCCTATATGCTCAAAGACAGTTTTTGATATGTCTCGGAGCTGGGAACATTTAGATCAGGAGGTATGTTCAACTTCCTATCAAATTTTTGTAGACGAAAATTGTTGGTCACTACACATGGTTCTGATATCTTGGGATTAG 690 0.4261 MAEFSSASTLPTPPESQTRLHFGKLQHGCEHYKRRCKIRAPCCNQIFSCRHCHNDAMVICSICDTEQEAAKVCANCGVNMGEYYCEICKFYDDNTEKGQFHCDECGICRVGGRDNFFHCPTCGSCYSVNLQGNHPCVENSMKSFCPVCYEYLFDSIKGTTIMTCGHTMHMDCFYEMAEQNQYRCPICSKTVFDMSRSWEHLDQEVCSTSYQIFVDENCWSLHMVLISWD 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g00716 229 ProSiteProfiles Zinc finger CHY-type profile. 22 107 IPR008913 GO:0008270
Adu06g00716 229 SUPERFAMILY RING/U-box 144 194 - -
Adu06g00716 229 PANTHER RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 21 209 - -
Adu06g00716 229 ProSiteProfiles Zinc finger CTCHY-type profile. 80 144 IPR017921 -
Adu06g00716 229 ProSiteProfiles Zinc finger RING-type profile. 145 188 IPR001841 -
Adu06g00716 229 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 129 218 IPR013083 -
Adu06g00716 229 Pfam CHY zinc finger 29 90 IPR008913 GO:0008270
Adu06g00716 229 PANTHER ZINC FINGER (C3HC4-TYPE RING FINGER) FAMILY PROTEIN 21 209 IPR031109 GO:0008270|GO:0016567
Adu06g00716 229 SUPERFAMILY CHY zinc finger-like 26 79 IPR037274 GO:0008270
Adu06g00716 229 Pfam Ring finger domain 145 187 IPR001841 -
Adu06g00716 229 SMART ring_2 145 187 IPR001841 -
Adu06g00716 229 SUPERFAMILY Zinc hairpin stack 81 138 IPR037275 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g00716 Adu-Chr6 8549182 8553699 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g00716 27 202 C2H2 Transcription Factor Family AT3G18290 40.933 1.37e-37 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g00716 K10144 - gmx:100818374 338.191