Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g00691 ATGATGACAGATCCAAGTGCAGAAGTAGTAGCTCTATCACCAACAACATTAATGGCAACAAACAGATTCGTGTGTGAGATATGCAACAAAGGATTTCAGAGAGACCAAAATCTTCAACTACACAGGAGAGGACACAATCTACCATGGAAGCTAAGGCAAAGAACAACCACAGAGGTCAAGAAGCGTGTCTACGTCTGCCCTGAGCCCACGTGCGTTCACCACAACCCATCACGTGCTCTTGGCGACCTCACTGGCATCAAGAAACACTTCAGCCGCAAACATGGCGAAAAGAAATGGAAGTGTGACAAGTGTTCCAAACGCTACGCTGTTCAATCTGATTGGAAAGCTCACCTCAAAACTTGCGGCACTCGCGAGTATAAGTGTGATTGCGGCACCATCTTTTCCAGAAGAGACAGTTTCATTACTCATCGTGCTTTCTGTGATGCTTTGACCGAAGAAAATAACAAACTTTCTTCCACCCATCAGGGTTTGTTAACAACTGGCATGCCCCCAAGTCAGATTCCATTAACCACTTCTTCTTCTTCATCAGATCAATTATTCATCACTGATCCACCACTTATCATTCCAACAACAACTCCTTTCAATAACTCCATCTTCTCATCGACAACTACTTCTTCTTCTTGTTCTTCTTCAACGCTTCAGCTGAGTTCTAGTGGCTTCAACAATGTTATTCTTTCTAATCCATCTTCTTCATCATCGCCTCACATGTCTGCAACTGCTCTGTTGCAGAAAGCAGCTCAAATGGGTGCAACTGCAAGTAACAACAGCATGAATTATTCACCCATGATGCAGAAAAGCTTCTCCATGGGAACAACTACCATGGCTGGAGTAGTTAGTGGTGGCCATGATGCTGCATTTACAAACCAATTGTTTCAGAAAGAAATCGTCTCATCACAACTGTTTGATGCAAACACTACTACTAATAGTAGTAGTAATAATGATATGGGAATGTATGGTCAAATGTTCATGGGAACAATTACTAGTAATAATAATAATAATGGGTTGATGAAGATTAGTAGTGATGTGGAACAAGAGATTAGTGATGATGATAATAATAATAATAATAATAACAATACGATAATGGTGGAGGCATCAAGGTTTGGAGGAGGGAGTGGAAGGGATGATGATATTGCAACTGTTCATGATTTCTTGGGAATTGGTGGAGCTTCATCAATTGCTTCAACAGCAACAGTGAGTTTGCATGAATCAGAGCAACAGCAAAGATTAGTAGCAGAGACATTGAATCAGCAGAGGTTGCAGATTATGAACCACTTTCATCACCATATTCCTCATCATGCTGCAGATTCAGCTATTGACAAAACTATGTGGGATGTCTGA 1359 0.4121 MMTDPSAEVVALSPTTLMATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRTTTEVKKRVYVCPEPTCVHHNPSRALGDLTGIKKHFSRKHGEKKWKCDKCSKRYAVQSDWKAHLKTCGTREYKCDCGTIFSRRDSFITHRAFCDALTEENNKLSSTHQGLLTTGMPPSQIPLTTSSSSSDQLFITDPPLIIPTTTPFNNSIFSSTTTSSSCSSSTLQLSSSGFNNVILSNPSSSSSPHMSATALLQKAAQMGATASNNSMNYSPMMQKSFSMGTTTMAGVVSGGHDAAFTNQLFQKEIVSSQLFDANTTTNSSSNNDMGMYGQMFMGTITSNNNNNGLMKISSDVEQEISDDDNNNNNNNNTIMVEASRFGGGSGRDDDIATVHDFLGIGGASSIASTATVSLHESEQQQRLVAETLNQQRLQIMNHFHHHIPHHAADSAIDKTMWDV 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g00691 452 ProSiteProfiles Zinc finger C2H2 type domain profile. 23 45 IPR013087 -
Adu06g00691 452 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 3 420 - -
Adu06g00691 452 SUPERFAMILY beta-beta-alpha zinc fingers 22 119 IPR036236 -
Adu06g00691 452 PANTHER PROTEIN INDETERMINATE-DOMAIN 2-LIKE 3 420 - -
Adu06g00691 452 ProSitePatterns Zinc finger C2H2 type domain signature. 25 45 IPR013087 -
Adu06g00691 452 Pfam Zinc-finger of C2H2 type 23 45 - -
Adu06g00691 452 Gene3D Classic Zinc Finger 77 157 - -
Adu06g00691 452 Gene3D Classic Zinc Finger 3 69 - -
Adu06g00691 452 SMART c2h2final6 64 94 IPR013087 -
Adu06g00691 452 SMART c2h2final6 23 45 IPR013087 -
Adu06g00691 452 SMART c2h2final6 99 119 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g00691 Adu-Chr6 8227022 8228380 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g00691 2 264 IDZ Gene Family AT3G50700 56.410 2.95e-109 328
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Adu06g00691 zf-met 0.0032 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g00691 - - adu:107492404 782.326
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu06g00691 06 8227022 8228380 Adu06g00691 06 8227022 8228380 ECH