Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g00688 ATGATGACGAAGAGGAAAAGCCAGAGGATTGGGAAGAAGGAGAGGAGCAAGTTCACGATGAAGAAGGGTACTCTTTCAACCACTTCCCATCTTCAGCTTCAGCTAGGTCAAGTTTCTCTCTTTCCACTCCTTCATCCTCCATCTTCTTCTTCTGCTTCCGCTCCTTCTTCCCGCTTCCAGAGCCTTCTAGATGCTGAATCTCACCGCCCAAACCCTCCCGCGGTCAACGATAACAACAACGCCTCCGACGACAGAGACTGTATTCTTAGCCAGGACTTCTTTTGCACTCCGGATTATATTACGCCGGATAATCAGAATTTCAACGGCTTGGATTTCAATATGGAGAATACCCCTTGCCCTAAATCACCGGAGAAGCTCAACACTACAAAAAGCAAGAGGTGCCGATTGGATGCTATCTCAGTTAATCCTCTCAGCCCAAACTTTTCTGGTGACCATCAACAAGTTGTTGAACTTGGAAAGGACTCTGTTGGGGAGGAAGTAGCTGCTGAGAAAACAGTAGCAGCTGATAAACCAAAGGCCCAAAATTATGTGTCACATTCTGCAGTTGCATTGCGCTGCAGGGTTATGCCTCCTCCCTGCATCCAGAATCCATATTTGAAAGATGTTTCACAAAAGGAGACAGACCCCTTTGGAAACCAAAGGATAAAATGTGCAGGTCTCTTCCCTGGAATAACTGGTGATGATGGTCTTTCACGCTATCGCACTGATTTTCATGAGATTGAGCAAATTGGTAGAGGGCACTTTAGTAGTGTTTTCAAAGTATTAAAACGAATAGATGGGTGCCTTTATGCTGTGAAACGCAGTGCCAGACAGTTACGACTGGAAACAGAAAGGAGAAAAGCTTTGATGGAAGTTCAAGCATTGGCTGCATTAGGTTCTCATGCAAACATAGTGGGATACTACTCTTCATGGTTTGAAAATGAACAGCTGTATATTCAGATGGAGCTTTGTGATCACAGCTTATCCATAAACAAATGCTCTTCATCATTTACAGAAGGACAAGTGTTAGAGGCTCTATATCAGATTGCCAATGCACTGCGGTTTATACACGAGAAGGGAATAGCTCATTTAGATGTCAAGCCTGATAATATTTATGTCAAAAATGGTGTATATAAACTTGGTGATTTTGGATGTGCAACTCTCCTTGACAATAGCCTCCTGGTTGAGGAGGGAGATGCACGTTATATGCCTCAGGAAATCCTCAATGATAATTATGATCACCTTGACAAAGTTGATATCTTTTCTTTGGGAGCTTCTGTGTACGAGTTCATTCGGCGATTGCCTTTGCCAGAATCAGGATGCCAATTTTTTAATCTTAAAGAGGGAAAGCTACCACTTTTGCCTGGCCACTCATTGCAATTCCAAAACTTGCTCAAGGCCATGATGGACCCTGATCCAGTTAAGCGTCCTTCTGCTCGGGAGTTGATAGAGAATCCAATTTTCGACAAGGTCATTAGAACAGCCAAAATTTGA 1494 0.4344 MMTKRKSQRIGKKERSKFTMKKGTLSTTSHLQLQLGQVSLFPLLHPPSSSSASAPSSRFQSLLDAESHRPNPPAVNDNNNASDDRDCILSQDFFCTPDYITPDNQNFNGLDFNMENTPCPKSPEKLNTTKSKRCRLDAISVNPLSPNFSGDHQQVVELGKDSVGEEVAAEKTVAADKPKAQNYVSHSAVALRCRVMPPPCIQNPYLKDVSQKETDPFGNQRIKCAGLFPGITGDDGLSRYRTDFHEIEQIGRGHFSSVFKVLKRIDGCLYAVKRSARQLRLETERRKALMEVQALAALGSHANIVGYYSSWFENEQLYIQMELCDHSLSINKCSSSFTEGQVLEALYQIANALRFIHEKGIAHLDVKPDNIYVKNGVYKLGDFGCATLLDNSLLVEEGDARYMPQEILNDNYDHLDKVDIFSLGASVYEFIRRLPLPESGCQFFNLKEGKLPLLPGHSLQFQNLLKAMMDPDPVKRPSARELIENPIFDKVIRTAKI 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g00688 497 SUPERFAMILY Protein kinase-like (PK-like) 238 490 IPR011009 -
Adu06g00688 497 MobiDBLite consensus disorder prediction 46 64 - -
Adu06g00688 497 Gene3D Phosphorylase Kinase; domain 1 234 322 - -
Adu06g00688 497 PANTHER BNAA08G27310D PROTEIN 81 402 - -
Adu06g00688 497 PANTHER BNAA08G27310D PROTEIN 415 491 - -
Adu06g00688 497 MobiDBLite consensus disorder prediction 46 82 - -
Adu06g00688 497 Pfam Protein kinase domain 244 488 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu06g00688 497 Gene3D Transferase(Phosphotransferase) domain 1 323 493 - -
Adu06g00688 497 ProSitePatterns Protein kinases ATP-binding region signature. 250 273 IPR017441 GO:0005524
Adu06g00688 497 MobiDBLite consensus disorder prediction 1 26 - -
Adu06g00688 497 SMART serkin_6 244 488 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu06g00688 497 ProSiteProfiles Protein kinase domain profile. 244 488 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu06g00688 497 ProSitePatterns Serine/Threonine protein kinases active-site signature. 361 373 IPR008271 GO:0004672|GO:0006468
Adu06g00688 497 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2-ALPHA KINASE EIF2-ALPHA KINASE -RELATED 81 402 - -
Adu06g00688 497 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2-ALPHA KINASE EIF2-ALPHA KINASE -RELATED 415 491 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g00688 Adu-Chr6 8196872 8200071 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g00688 1 491 Core Cell Cycle Gene Families AT1G02970 60.685 0.0 586
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WEE Adu06g00688 Pkinase 8e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g00688 K06632 - gmx:547742 769.615
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu06g00688 06 8196872 8200071 Adu06g00688 06 8196872 8200071 ECH