Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g00676 ATGTATCGAAAGAATGCCCGAGTGGTTTTGAGCGGAGGTGATGAGGTGGTCTTCAACATTTATGGCAAGCATGCTTATGTGATATATATATGTCAGCAGCTCACCAATATTAATGCTACTACTGGTGTGCCTTCTCTGAGTATTTTAGAAGCCCAAAGTGATCTAATAAGAGGAATGCAGATTGAAGCTAGATCTAGTGACCCTTCAACTGTTGATGGAGCATCGATGTTGGCCTCTTTGTCTAATGTTCACAAAGATATATCAATCATCACACCTTCTGGTAAAACTTGCAATAATGTCCAACAAACTGCTGGAGTTTCATCATTATCTCCTGGCAATGAGGATGGCATTCCAGATAATACAGTGAAGGATGGTACTAGCATTAATGAACCAGCAGGAGTTTTTTCCGCTGAGAAAACTGTTCCTGCATCCTCTACAACTGTTGAGAAAAATTCTAATGTTGATAGCATGGCAAGTTCTACTCTGAATGCAGATGTTGGGAAGACAAGTGCGGGTAGTGATCAATTACGACCATTACTGCGGATGTTTGCTGCCCCTTGTCCTGAATTAGATAATATTTACAAGATATCTGAAGAGAAGAGTGAGTTAAGAGAACTACTTCTTAAGTATCTTGATTCCCCGACAGTATTGGCATCTTCTAAGCAGCAAGCACTTAAGGACAGTTTGAAACAAGGAATTCTTAGTCATGAAGATATTGATGTGTCTTTTGAAACTTTCCCATATTATCTAAGTGATACGACAAAGAATGTTTTGATTGCTTCTACTTATATGCATCTGAAAAGCAAAGGCTTTGGAAAATATGCTTCAAACCTCTCTTCAGTGTCCCCACGGATATTATTATCTGGTCCCGCAGGCTCCGAAATATACCAGGAAACTTTGTCCAAGGCACTTGCTAAGCATTTTTCTGCCAGCCTACTAATTGTGGATTCTCTTTTGCTATCTGGTGGCACATCATTAACAGAAGTGCACAATGCTAAAGAAAGTGCAAAGCCTGAAAGAACACCTGCAGTTGCTAAGAGAAGTACTCAGGTTTCCACATCACAGCACAAGAAATCAGTCTCTAAACTAGTCTCTAGTGTTGATGGGCAAATTATTGGTGGATCCACATTCTGTTCTCCAGGGTGGGTGAAACTAGAGACTAATGTCGGGTCATCAAAAGCCACTATTCTTAAAAATGGTGATCGAGTAAAATTTATTGGTCACATTCATTCACCCTCATCGCCACAAACTAGTTTTCTGTTTACATTGCTAATGAAACTTCTATTTGTGTCAATTCCCTATATTCTAAAAGAAATTTTGCTATGCAATAATGTATATGTACGCCTTGAGGGAGAAGGGGCTAATCAGTTACTGCGGGATGGTTCTGGAGGAGATGACTTTGACAAGATCGCAGTTAATGATATTTTTGAGGTTGTCTCCAATCAGAGTAAAAGTGCTGCACTAGTTGTTTTCATTAAAGATATTGAGAAGGCGATCATTGGTAATTCAGACATTTTGAAGAGTAAACTTGAAAGCTTACCACAAAATGTTGTTGTAATTGGCTCACATACTCAGCTCGATAGTCGAAAGGACAAGACCACACATGCTGGCATTCTGTTAACAAAGCTTGGGGGCAATCCAGCAGCATTACTTGATCTTTCTTTCCCGGATAAGTTCACTAGATTGCTTGATAGGAGCAAAGAAAGTCCCAAAGCAGTAAAGCAACTTACTCGCCTTTTTCCGAATAGGGTGCCAATACAACTTCCTGAGGATGAGCTTTTGCTTTCTGATTGGAAGCAGCAGTTGGAACGAGATATTGAGACTATGAAGGCTCAATCCAATACTGTCAGCATTCGAACAGTTCTCAACCGAATTGGACTGGAATGTCCTGAACTTGAGACACTCTGCATCAAAGATCAAGCTCTAACAGCAGAAAGTGTGGAAAAAATCATTGGCTGGGCTATAAGTCACCATTTTATGCATTCGGCTGAGGGTTCTGTCAAAGACTGTAAGCTTGTGATATCTGCAGAAAGCCTTAAGTATGGGCTGAACATTCTACAGGGCATTGAAGGTGAAAATAAGAATTCAAAGAAATCGCTTAAGGATGTGGTTACTGAGAATGAATTTGAGAAAAAACTGCTTGCTGATGTGATTCCTCCAAGTGATATTGGGGTCACTTTTGATGATATTGGGGCTTTAGAAAACGTGAAGGACACCTTGAAGGAGTTGGTCATGCTTCCTCTACAGAGACCTGAACTCTTTAGCAAAGGACAGTTGGCTAAGCCCTGCAAGGGAATACTGCTCTTTGGCCCCCCTGGTACTGGAAAGACAATGCTTGCGAAGGCTGTAGCAACCGAGGCTGGAGCCAACTTTATTAACATTTCAATGTCTAGCATTACTTCAAAGTGGTTTGGGGAAGGAGAAAAATATGTCAAAGCTGTCTTTTCTCTAGCCAGCAAGATTGCCCCAAGTGTTATTTTTGTCGATGAGGTCGACAGTATGTTAGGAAGACGTGAAACTCCTGGCGAACATGAGACTATGCGTAAAATGAAGAATGAGTTCATGATGAATTGGGATGGTCTGCGAACAAAAGATAAAGAGCGTGTACTTGTTCTCGCTGCTACAAATAGGCCCTTTGATCTTGATGAGGCTGTTATTAGGAGGCTTCCAAGAAGATTTATGGTTAATTTGCCAGATGCTCCAAACAGGGAAAAAATTCTGAGAGTCATCTTAGCAAAAGAAGATTTGGCACCGGATGTTCATTTGGAAGAAATAGCAAATATGACTGATGGATATTCGGGGAGTGACCTAAAGAATCTCTGTGTAACAGCAGCTTATTGCCCAATAAGAGAGATCTTGGAAAAGGAAAAGGAAGAGAGAAGTGTAGCATTGGCCGAGAACAGACCTTTACCTGGATTATGTAGCAGTGCTGATGTCCGTTCCTTAAAGATGGATGATTTGAGATATGCACAAGAGCAGGTGTGTGCGAGCTTCTCGTCAGATTCGTTGAATATGAACGAGCTACTTCAATGGAACGACCTTTATGGAGAAGGTGGATCAAGGAGAACGAGATCTTTGAGCTATTTCATGTAA 3093 0.409 MYRKNARVVLSGGDEVVFNIYGKHAYVIYICQQLTNINATTGVPSLSILEAQSDLIRGMQIEARSSDPSTVDGASMLASLSNVHKDISIITPSGKTCNNVQQTAGVSSLSPGNEDGIPDNTVKDGTSINEPAGVFSAEKTVPASSTTVEKNSNVDSMASSTLNADVGKTSAGSDQLRPLLRMFAAPCPELDNIYKISEEKSELRELLLKYLDSPTVLASSKQQALKDSLKQGILSHEDIDVSFETFPYYLSDTTKNVLIASTYMHLKSKGFGKYASNLSSVSPRILLSGPAGSEIYQETLSKALAKHFSASLLIVDSLLLSGGTSLTEVHNAKESAKPERTPAVAKRSTQVSTSQHKKSVSKLVSSVDGQIIGGSTFCSPGWVKLETNVGSSKATILKNGDRVKFIGHIHSPSSPQTSFLFTLLMKLLFVSIPYILKEILLCNNVYVRLEGEGANQLLRDGSGGDDFDKIAVNDIFEVVSNQSKSAALVVFIKDIEKAIIGNSDILKSKLESLPQNVVVIGSHTQLDSRKDKTTHAGILLTKLGGNPAALLDLSFPDKFTRLLDRSKESPKAVKQLTRLFPNRVPIQLPEDELLLSDWKQQLERDIETMKAQSNTVSIRTVLNRIGLECPELETLCIKDQALTAESVEKIIGWAISHHFMHSAEGSVKDCKLVISAESLKYGLNILQGIEGENKNSKKSLKDVVTENEFEKKLLADVIPPSDIGVTFDDIGALENVKDTLKELVMLPLQRPELFSKGQLAKPCKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVIFVDEVDSMLGRRETPGEHETMRKMKNEFMMNWDGLRTKDKERVLVLAATNRPFDLDEAVIRRLPRRFMVNLPDAPNREKILRVILAKEDLAPDVHLEEIANMTDGYSGSDLKNLCVTAAYCPIREILEKEKEERSVALAENRPLPGLCSSADVRSLKMDDLRYAQEQVCASFSSDSLNMNELLQWNDLYGEGGSRRTRSLSYFM 1030
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g00676 1030 CDD AAA 764 897 - -
Adu06g00676 1030 MobiDBLite consensus disorder prediction 330 351 - -
Adu06g00676 1030 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 725 1005 IPR027417 -
Adu06g00676 1030 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 1 411 - -
Adu06g00676 1030 Gene3D - 724 1004 IPR027417 -
Adu06g00676 1030 Gene3D - 898 992 - -
Adu06g00676 1030 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 454 1030 - -
Adu06g00676 1030 PANTHER P-LOOP NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN 1 411 - -
Adu06g00676 1030 PANTHER P-LOOP NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN 454 1030 - -
Adu06g00676 1030 Pfam AAA+ lid domain 919 955 IPR041569 -
Adu06g00676 1030 Pfam ATPase family associated with various cellular activities (AAA) 766 895 IPR003959 GO:0005524|GO:0016887
Adu06g00676 1030 ProSitePatterns AAA-protein family signature. 869 888 IPR003960 GO:0005524|GO:0016887
Adu06g00676 1030 Coils Coil 599 619 - -
Adu06g00676 1030 SMART AAA_5 762 899 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g00676 Adu-Chr6 8113226 8120210 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g00676 761 966 Calmodulin-binding Proteins AT3G56690 36.190 1.32e-32 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g00676 - - adu:107492402 1944.09