Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Adu06g00642 | ATGTCTAGTGTGGTGGAGTCTAAGAGTGATGGTTGTTATTATTCGGTGCTTGGGGTTCGCAAGCACTCAACCGATCACGAAATTCGTTGCGCTTATCGTAAGATGGCTCTGAAATGGCACCCTGATCGGTGGATCAAAGAACCAAAGCTTGCGGTGGAAGCAAAGAAACAGTTTCAGCATATTCAAGAGGCTTATTCAGTTTTGTCTAATAAAGGGAAGAGAATGATATATGACGCGGGAATGTTTGGTTTTATTGGAGAAGACGATGATGAGGGTGAGAAATGCATGATGGAGGATTTTCAGGGAATGCTAATGGATATGATAGCAGAAAGTGATGAAGGGAGGGGCAAATCCGGGTTATGTTGGAGCTCCTCTAATAGTCCTAAGAAAAAGACACGTATCTTATAG | 408 | 0.4289 | MSSVVESKSDGCYYSVLGVRKHSTDHEIRCAYRKMALKWHPDRWIKEPKLAVEAKKQFQHIQEAYSVLSNKGKRMIYDAGMFGFIGEDDDEGEKCMMEDFQGMLMDMIAESDEGRGKSGLCWSSSNSPKKKTRIL | 135 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Adu06g00642 | 135 | PANTHER | DNAJ HOMOLOG SUBFAMILY B MEMBER 6-LIKE | 5 | 133 | - | - | |
| Adu06g00642 | 135 | SMART | dnaj_3 | 11 | 73 | IPR001623 | - | |
| Adu06g00642 | 135 | MobiDBLite | consensus disorder prediction | 118 | 135 | - | - | |
| Adu06g00642 | 135 | SUPERFAMILY | Chaperone J-domain | 11 | 105 | IPR036869 | - | |
| Adu06g00642 | 135 | PANTHER | PUTATIVE, EXPRESSED-RELATED | 5 | 133 | - | - | |
| Adu06g00642 | 135 | PRINTS | DnaJ domain signature | 14 | 32 | IPR001623 | - | |
| Adu06g00642 | 135 | PRINTS | DnaJ domain signature | 32 | 47 | IPR001623 | - | |
| Adu06g00642 | 135 | PRINTS | DnaJ domain signature | 53 | 73 | IPR001623 | - | |
| Adu06g00642 | 135 | ProSiteProfiles | dnaJ domain profile. | 12 | 81 | IPR001623 | - | |
| Adu06g00642 | 135 | MobiDBLite | consensus disorder prediction | 116 | 135 | - | - | |
| Adu06g00642 | 135 | Gene3D | DnaJ domain | 1 | 84 | IPR036869 | - | |
| Adu06g00642 | 135 | Pfam | DnaJ domain | 13 | 78 | IPR001623 | - | |
| Adu06g00642 | 135 | CDD | DnaJ | 12 | 70 | IPR001623 | - | |
| Adu06g00642 | 135 | ProSitePatterns | Nt-dnaJ domain signature. | 58 | 77 | IPR018253 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Adu06g00642 | Adu-Chr6 | 7734067 | 7736549 | Dispersed/Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Adu06g00642 | 12 | 79 | C2H2 Transcription Factor Family | AT1G74250 | 46.377 | 1.52e-14 | 67.4 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Adu06g00642 | - | - | pvu:PHAVU_001G210400g | 184.882 |