Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g00628 ATGGGAAGGGCTCCCTGTTGTGACAAAGTGGGACTCAAGAAAGGCCGCTGGACAAAAGAGGAGGATCAAATCTTGACCGACTACATTCAAGCCAATGGAGAAGGTTCTTGGAGGGCTTTGCCTAAGAATGCTGGGTTACTAAGATGTGGCAAGAGTTGCAGATTGAGATGGATCAACTATTTAAGAGCTGATCTCAAAAGAGGAAACATCTCTATTGAAGAGGAAGCCATCATAACTAAGTTGCATGCTTCTTTTGGCAACAGGTGGTCACTGATAGCAAGTCATTTACCAGGCAGAACAGACAACGAGATCAAGAACTACTGGAACTCTCACTTGAGCAGGAAAGTTTACAGCTTGCCAGCCCCAAACGACAAAGACACAACCACTTGCGCCACCGCCACTGCCATTCCCAAGATCTTGGATACACCTCCGAAGCGTAAAGGTAGCGGCAAGACCAGCAGGTGGGCCATGAAGAAGAACAAAAGCACCTATTCGCCCCCAATCCAAACCCAGACGCCTTCATCGGAGGAGGAGGGAAGAGGAGAAGTAAGTGAAAAAATGATGGAGTGTGAGGAGGGGAGCATTGATGATGGTGGGGTGTTGAGTTTTAATGACATAATGGAGTCAAGTTGCATGCAGCAGCTGGATGATGATCATCAACCATGTGGCCTTTCCACCGTTACTACTGCTGGGGTCCCAAATGATGACACGTGTCCCAACACTACTACTACTACAACAACAACAGGGGAGGCATCGCATTCTAACTGCTCTTCCAATAATTCCATGGCTTCTGGGTTAGAGTTAGATGATAGCTATTGGGAGAGCGTGTTGGAGTTGAATAATAATAGCACCGATGAGTCCTCCTGGGAGCACAGTACTGAAGCCTTGTTCAATTGGCTGTGGGAAGATCATCACTTGGACAAGCTTGGAGGACAACATCATGATGATGATGATCACAAACAAAATAATGCCATGATGGTTGATTGGTTTCTCTCCTGA 999 0.4675 MGRAPCCDKVGLKKGRWTKEEDQILTDYIQANGEGSWRALPKNAGLLRCGKSCRLRWINYLRADLKRGNISIEEEAIITKLHASFGNRWSLIASHLPGRTDNEIKNYWNSHLSRKVYSLPAPNDKDTTTCATATAIPKILDTPPKRKGSGKTSRWAMKKNKSTYSPPIQTQTPSSEEEGRGEVSEKMMECEEGSIDDGGVLSFNDIMESSCMQQLDDDHQPCGLSTVTTAGVPNDDTCPNTTTTTTTTGEASHSNCSSNNSMASGLELDDSYWESVLELNNNSTDESSWEHSTEALFNWLWEDHHLDKLGGQHHDDDDHKQNNAMMVDWFLS 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g00628 332 MobiDBLite consensus disorder prediction 140 183 - -
Adu06g00628 332 CDD SANT 16 61 IPR001005 -
Adu06g00628 332 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Adu06g00628 332 MobiDBLite consensus disorder prediction 237 260 - -
Adu06g00628 332 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Adu06g00628 332 CDD SANT 73 112 IPR001005 -
Adu06g00628 332 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Adu06g00628 332 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 2 314 - -
Adu06g00628 332 SMART sant 66 114 IPR001005 -
Adu06g00628 332 SMART sant 13 63 IPR001005 -
Adu06g00628 332 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Adu06g00628 332 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Adu06g00628 332 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Adu06g00628 332 PANTHER MYB TRANSCRIPTION FACTOR 2 314 - -
Adu06g00628 332 Gene3D - 11 67 - -
Adu06g00628 332 MobiDBLite consensus disorder prediction 155 177 - -
Adu06g00628 332 Gene3D - 71 116 - -
Adu06g00628 332 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g00628 Adu-Chr6 7520000 7523061 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g00628 1 176 MYB Transcription Factor Family AT5G49330 59.474 6.78e-73 227
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Adu06g00628 Myb_DNA-binding 1e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g00628 K09422 - gmx:100793350 286.189