Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g00617 ATGGAAGAGGTTGTGATCATAATCAACGACTCGAAATTAATATCTCCGGTTGTTCCTCGCTGTAGAATATGTCACGAAGAAGAGTTTGAGAGCTCAACAACCTTGGAAGCACCATGTGCTTGTTCTGGAACTGTTAAGTTTGCTCATAGAGATTGCATACAGAGATGGTGCAACGAGAAAGGAAATACGATATGTGAATTATGTCTTCAGCAATATCAACCTGGATATACAGCAAAGCCTAAGAAGTCTCACATAAATGATGAAGCAATGTCCACTAGGATGGAGGAAGAAGAATCAAACGGAAGAATAGAGATAATGGATGAAGTGGAAGAGCAGCCAGAATGCAATGCTGCAACTCAAAGAAGCGCGTCTTGCTGTCGAACAATTGCATTAGCTGTAAGCATTTACGTGTTTTCTTGGCGGCGTTAA 429 0.4126 MEEVVIIINDSKLISPVVPRCRICHEEEFESSTTLEAPCACSGTVKFAHRDCIQRWCNEKGNTICELCLQQYQPGYTAKPKKSHINDEAMSTRMEEEESNGRIEIMDEVEEQPECNAATQRSASCCRTIALAVSIYVFSWRR 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g00617 142 PANTHER AMINOACYLTRANSFERASE, E1 UBIQUITIN-ACTIVATING ENZYME-RELATED 1 135 - -
Adu06g00617 142 SUPERFAMILY RING/U-box 19 73 - -
Adu06g00617 142 Pfam Protein of unknown function (DUF3675) 74 133 IPR022143 -
Adu06g00617 142 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 10 81 IPR013083 -
Adu06g00617 142 ProSiteProfiles Zinc finger RING-CH-type profile. 13 75 IPR011016 GO:0008270
Adu06g00617 142 PANTHER RING/FYVE/PHD ZINC FINGER DOMAIN-CONTAINING 1 135 IPR033275 -
Adu06g00617 142 SMART ringv_2 20 69 IPR011016 GO:0008270
Adu06g00617 142 CDD RING_CH-C4HC3_MARCH 21 68 - -
Adu06g00617 142 Pfam RING-variant domain 21 68 IPR011016 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g00617 Adu-Chr6 7366762 7369935 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g00617 8 68 C3H Transcription Factor Family AT2G37950 35.484 1.92e-07 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g00617 - - gmx:100802379 199.904
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu06g00617 06 7366762 7369935 Adu06g00617 06 7366762 7369935 ECH