Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g00615 ATGACCAATGAAGCCGTTCTTGTCGATGCCGTTAAGGCCTTGTTCATTTTTTCTCATACTGAAATTGAGGCATTGACAACACTCATACAACCCATGAATTATTCCTCCAAGAATTTAGCAAGATTTATAAATTCAGTTCTCCATGCTACCAACATCTCATTCTCTGACATTAAAACCAAGGTTGCTCCATTATTATTTGAATCATTTGAGACGGTTCCTCAATTAGCCCAAATCTCATACATAGGAATGGAAGGCTACTTTTTTTCATTCTACAATGGTGATCATGGTCAACCTCTCGCAATATACTCAAATCGTTCAACATCTTCTTCCATTATTTCTAAGCATTATTATGTTCAGCCGGTGAATCCTGACAATGGAAAATTATATGGGAATGCAACAATATTTGATTCCTATGTTAATACAACTTGGGTTGGGGAAGCATTAAATGGTTCAAATGATGGATTTGTCACATTGGAAAAAAAGCTTAGCAATGATCAAGAATTCTTGTTCATTAGTTCATCAAGAATCACAAAAACAGGTTCAGTGATCTCTCTTGGAGTTCAAGCAACAAAAATAACTGATTTTTTCTCTAGTGTTATTAGTCATCACCAAGGTGCCATGTTGTATCTAGCTACAAAAGATGGACAAGTGCTTCAAGAAGGGATCAAGAATACTCATATGATTGTTTCTAAGAACGACACGGTTTCGTTTCAATATGTGAATAATCACACTAGTTATTATCAGGGTTCAGTTACATGCAAAAATGATGGTGAAGTTGTTGCTTCTACTTTGAAGATTCAGGGTGTTGAGTATTTAATGCGCTGCTCCTCAATTCAGATAATGGGAATCAAATTGGTGTATGTTGTGGGAGTGCCGAAAAATGGAGCAATGATCAGTTTCATAAAGGAATTTAAGAGATATGGGTTGATGGTACTGAGTGCCATGGTGATTATGTCCTTAATTGGCACGATTAGCATTGTAATTATGAAAAAGGCACTAAAGAAGCAAAAAGAAGCAACGGAGGAAGCTGAGAGAAAGAGTAAGAATAAGAGCATTGCTTTTGCGACAGCATGCCATGATGTTCGTGCTTCCCTCGCAGCCTTGACTGGTTTGATAGAGTTGTCATCTTCGCAACTCGTCCCTTCTTCATCAGAACTAAACTCCAATCTCAAACAAATGGACTCTTATACCAAAGATTTACTAGGAATGCTGAATTCCATATTGGATGCAAGCAAGATTGAAGCAGGGGAAATGCAACTTGAGGAAGAAGAATTTGATGTGTTCCAATTCCTAGAGGAGGTAGTTGATTCTTACCATAATGTGGCTATGAAGAAAGGAGTAGATATTGTATTGGAACCTTTCAATGACTCAGTTCACAGATATTCACACACAAAAGGTGACAGAGTTAAACTCAAGAGAGTCTTGTGCAACTTATTAGACAATGCTGTTAAATTCACTGATGAAGGACACATAGCAGTTAGGGTAAGGGCACAGAAACCTGCATTGCAAAACTCAATGTCAATGATGAGGGTTACTAACCAAAATAGACCTTGGTCATGCTTATTCATCAAAAGAAAAAATAATGAACGACGGAATGATGATGACATAGAAGCTTCTAATTCAACCCAACCAGATCCTAGTAATACCATGGATTTCATATTTGAAGTTGAAGATACTGGCAAAGGAATTCCCAAAGACAAGCATGAGTCTGTGTTTGAGAATTATGTCCAAGTCAAAGAAACTGCTATTGACCATGGTGGAACTGGCTTGGGACTTGGCAGTGTGAGATCTTTGGTTCGATTGATGCATGGAGATATAAGAATTGTGGAGAAGGATAATGGTGGAAAAGGAACATGTTTCAGGTTCAATGTGCACCTCACTGTATGTGAGAAAAGAACAGATGATATCACAAGAGAAAGTGAATCTAAACCAGTTGACAGAACTCAATCACACAGGTCAACCATTCATGCTACTAGTTCTGGTTCAAGCATGTGTTCCTTGAGTCCCAAGTTACCTATTTGCGGCCCTAGCACTTTTCGGCATGAGGGATCTCGAGTTGTTCTCTTGATTCAAGGAGAAGAGCGCCGAAGAGCAACACAAAGGTTCATAGAGAGAAAAGGGATCAAAGTTAAGGTTGTTAAGCAGTGGACTAATCTGTCTCATACCCTCAATAAGATAAAAAAGAAGGGTCTGAATAGCTTAAGTTCAGGTTCTAGTTCTAGTTCTGCAACACATGGTTCTACTAATGCCCCTTTGAGTGTTTCGATGGATGAAATTGAATCTACCCAAGGATTCATCCTGATTGTGATTGATGCAAAAGCAGGACCATTTCAAGAACTATGCAGGGTGGTCTCTGAATTCAAGAGAGGCATTTGTGTTTCTTGTAGAGTTGTTTGGTTAGAGAATCCAATTTCTCCTAATCTTGATTTCAATAGCCTAAATGAGGATGATTATGATCCCAATGACATTGTTCTTCATAAACCATTACATGGTACCTCTTTGTTCCAAGTTTTAAGTCTTCTTCCAGAGTATGGTGATGGATCAATTCAAAGAGCTGAACTAGAAAAGTGCGGCACTTCAAGGTCAAGGAGTGGGAAGGAACCACAACAATCCATTGGAGATCAATCTCATGATCAAGGAGGAACAAAAGAGTGTGAAGTTCCAAGAAGCAGTGACAAGCCCTTGAGTGGTAAGAGAATCATGGTGGTTGAAGACGATAACACGATCCGCAAGATAGCTTCTGCTTCTTTGGAACAGCTTGGTGCTTCTGTTGAGAAATGTGAGAATGGTGAACAAGCTGTGGAGCTAGTTAAAGAGGGTCTAGCTAGAGATTTTCCAAATCTTCCATATGATTACATCTTTATGGACTGCCAGATGCCAGTGATGAATGGATATGAGGCAACAAGGCTAATAAGAGAGATAGAGAAAGAGTATAATACTCACATTCCTATATTTGCATTAACTGCTAATACTCAGGAAGAGGCAAATCCATTAGAAGCTGGAATGGACCATCACTTAGTCAAACCCATTGACAAAAAGGGTTTGCTTGAAGCCATCACAAAAGTACACGATAGAGTTGCCATTAGAGAGTGA 3093 0.3886 MTNEAVLVDAVKALFIFSHTEIEALTTLIQPMNYSSKNLARFINSVLHATNISFSDIKTKVAPLLFESFETVPQLAQISYIGMEGYFFSFYNGDHGQPLAIYSNRSTSSSIISKHYYVQPVNPDNGKLYGNATIFDSYVNTTWVGEALNGSNDGFVTLEKKLSNDQEFLFISSSRITKTGSVISLGVQATKITDFFSSVISHHQGAMLYLATKDGQVLQEGIKNTHMIVSKNDTVSFQYVNNHTSYYQGSVTCKNDGEVVASTLKIQGVEYLMRCSSIQIMGIKLVYVVGVPKNGAMISFIKEFKRYGLMVLSAMVIMSLIGTISIVIMKKALKKQKEATEEAERKSKNKSIAFATACHDVRASLAALTGLIELSSSQLVPSSSELNSNLKQMDSYTKDLLGMLNSILDASKIEAGEMQLEEEEFDVFQFLEEVVDSYHNVAMKKGVDIVLEPFNDSVHRYSHTKGDRVKLKRVLCNLLDNAVKFTDEGHIAVRVRAQKPALQNSMSMMRVTNQNRPWSCLFIKRKNNERRNDDDIEASNSTQPDPSNTMDFIFEVEDTGKGIPKDKHESVFENYVQVKETAIDHGGTGLGLGSVRSLVRLMHGDIRIVEKDNGGKGTCFRFNVHLTVCEKRTDDITRESESKPVDRTQSHRSTIHATSSGSSMCSLSPKLPICGPSTFRHEGSRVVLLIQGEERRRATQRFIERKGIKVKVVKQWTNLSHTLNKIKKKGLNSLSSGSSSSSATHGSTNAPLSVSMDEIESTQGFILIVIDAKAGPFQELCRVVSEFKRGICVSCRVVWLENPISPNLDFNSLNEDDYDPNDIVLHKPLHGTSLFQVLSLLPEYGDGSIQRAELEKCGTSRSRSGKEPQQSIGDQSHDQGGTKECEVPRSSDKPLSGKRIMVVEDDNTIRKIASASLEQLGASVEKCENGEQAVELVKEGLARDFPNLPYDYIFMDCQMPVMNGYEATRLIREIEKEYNTHIPIFALTANTQEEANPLEAGMDHHLVKPIDKKGLLEAITKVHDRVAIRE 1030
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g00615 1030 SMART HKATPase_4 466 628 IPR003594 -
Adu06g00615 1030 SMART HisKA_10 349 416 IPR003661 GO:0000155|GO:0007165
Adu06g00615 1030 MobiDBLite consensus disorder prediction 855 898 - -
Adu06g00615 1030 SMART REC_2 898 1019 IPR001789 GO:0000160
Adu06g00615 1030 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 405 624 IPR036890 -
Adu06g00615 1030 PANTHER HISTIDINE KINASE CKI1-LIKE 18 1022 - -
Adu06g00615 1030 ProSiteProfiles Response regulatory domain profile. 899 1023 IPR001789 GO:0000160
Adu06g00615 1030 SUPERFAMILY CheY-like 894 1025 IPR011006 -
Adu06g00615 1030 PANTHER TWO-COMPONENT HISTIDINE KINASE 18 1022 - -
Adu06g00615 1030 Gene3D - 327 414 - -
Adu06g00615 1030 Gene3D - 415 634 IPR036890 -
Adu06g00615 1030 Gene3D - 875 1027 - -
Adu06g00615 1030 CDD REC_hyHK_CKI1_RcsC-like 900 1019 - -
Adu06g00615 1030 ProSiteProfiles Histidine kinase domain profile. 356 628 IPR005467 -
Adu06g00615 1030 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 337 417 IPR036097 GO:0000155|GO:0007165
Adu06g00615 1030 MobiDBLite consensus disorder prediction 637 661 - -
Adu06g00615 1030 Pfam Response regulator receiver domain 900 1019 IPR001789 GO:0000160
Adu06g00615 1030 PRINTS Bacterial sensor protein C-terminal signature 570 580 IPR004358 GO:0016310|GO:0016772
Adu06g00615 1030 PRINTS Bacterial sensor protein C-terminal signature 586 604 IPR004358 GO:0016310|GO:0016772
Adu06g00615 1030 PRINTS Bacterial sensor protein C-terminal signature 612 625 IPR004358 GO:0016310|GO:0016772
Adu06g00615 1030 PRINTS Bacterial sensor protein C-terminal signature 552 566 IPR004358 GO:0016310|GO:0016772
Adu06g00615 1030 MobiDBLite consensus disorder prediction 879 898 - -
Adu06g00615 1030 Coils Coil 326 350 - -
Adu06g00615 1030 MobiDBLite consensus disorder prediction 863 878 - -
Adu06g00615 1030 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 466 627 IPR003594 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g00615 Adu-Chr6 7349576 7353781 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g00615 33 1012 Histidine Kinase Gene Family AT2G47430 37.325 0.0 609
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Adu06g00615 HATPase_c 2.5e-26 CL0025
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g00615 - - aip:107646610 1896.32