Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g00611 ATGCAGACCCAGAAGCAAAAAGTAGAAAACGAAGCAAAAGATGCAGAAGCAGAAGCACTCAAGCAGACCCAGAAGAAGCAGAAGACGAAGCAGAAACAAAGATCAAAGCAAAAAGCAGAAGCGGCGAGGTGGCGAGGAGCAGCGGCGAGAAGTAGTGGCCAGAACGCAGCGACTCTGCCGGCGAGTTGCCACGAGGAAATAATGGCTCCGATCCAGCGCGCGTTGAGTTCGGGATCGGAAGGTAGCGGAGATCCACCGATAGTGTTGGACGAAAGGAAGAGGAAGAGGATGCTCTCGAATCGTGAATCTGCACGCCGTTCGAGGATGAGGAAGCAAAAGCAGCTGGAGGACCTCACCGAAGAGGTGACGAAGCTGCAGTCGGCGAATAAGAACCTGGCGGAGGCCATCAAGGCGAAGGAGGAAGCCATGACGGAGACTGAGGCAGCCAACGGCGTCCTTAGGGCTCAGATGACGGAGCTTACCGACCGTCTCCGGTTCCTCAACTCGATCCTTGAGATTGCCGAGGATGTCAGTGGACTTTCCGTCGATATACCTGAGATTCCGGATCCGCTTCTGAAGCCATGGCAGATCCCTCACCCAATTCAACCAATCATGGCTTCCGCGGACATGTTCCTGCATTGA 642 0.5467 MQTQKQKVENEAKDAEAEALKQTQKKQKTKQKQRSKQKAEAARWRGAAARSSGQNAATLPASCHEEIMAPIQRALSSGSEGSGDPPIVLDERKRKRMLSNRESARRSRMRKQKQLEDLTEEVTKLQSANKNLAEAIKAKEEAMTETEAANGVLRAQMTELTDRLRFLNSILEIAEDVSGLSVDIPEIPDPLLKPWQIPHPIQPIMASADMFLH 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g00611 213 SMART brlzneu 88 152 IPR004827 GO:0003700|GO:0006355
Adu06g00611 213 MobiDBLite consensus disorder prediction 7 25 - -
Adu06g00611 213 PANTHER BZIP TRANSCRIPTION FACTOR 53 68 211 - -
Adu06g00611 213 Coils Coil 5 40 - -
Adu06g00611 213 PANTHER BZIP TRANSCRIPTION FACTOR 44 68 211 - -
Adu06g00611 213 MobiDBLite consensus disorder prediction 1 114 - -
Adu06g00611 213 SUPERFAMILY Leucine zipper domain 92 139 IPR046347 GO:0003700|GO:0006355
Adu06g00611 213 Coils Coil 101 149 - -
Adu06g00611 213 MobiDBLite consensus disorder prediction 86 114 - -
Adu06g00611 213 Pfam bZIP transcription factor 92 142 IPR004827 GO:0003700|GO:0006355
Adu06g00611 213 Gene3D - 90 144 - -
Adu06g00611 213 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 90 137 IPR004827 GO:0003700|GO:0006355
Adu06g00611 213 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 95 110 IPR004827 GO:0003700|GO:0006355
Adu06g00611 213 CDD bZIP_plant_GBF1 93 142 IPR045314 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g00611 Adu-Chr6 7315227 7318954 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g00611 75 211 bZIP Transcription Factor Family AT3G62420 57.554 7.49e-51 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Adu06g00611 bZIP_1 3.4e-10 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g00611 K25786 - gmx:778144 201.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu06g00611 06 7315227 7318954 Adu06g00611 06 7315227 7318954 ECH
Adu06g00611 06 7315227 7318954 Adu09g00956 09 16171131 16171568 PCT