Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g00603 ATGGGGATTGGGCCTCTTTCCTCCACACCATTCAATTTCAGTGGATTCCAAGGCGGTTATGATTCTGTTAATATCCATGAAGAGAAGTTTGTGTTACAAGAGAAGCAAGGTTTCTCAGCAGTAATGGAATTAGGTAGAGGAGATAATCTGTTCAAACATCAGCAGCATCATCAACGCAAGCATGACCATGATGATGAAGATATCAAAGTTGGTGACATGATCCTACAAGATGTCATCAATTTTGACCCTGATTATGATAGTCTCCAACCAACTTCACAAGAGTTTCAAGAAACAATAGAATTCAAGAATATTCATCAGGCACCGTCGTCTTTGACAATAGCATCATTGGAGCTCTTGAGAAACTATGGAAGCAAGTTCAAGAAGCTAACCGGGGAAAACATAAGCGACAACTTCAGCAGCGACAACATCGAGAATAGTACTTGTTCGGAGAATCAAAGATTGTCAACTGAAGAAATCATGAGAGTTGCAGGGGCAAGGTATGTGCATTACTCTGCACACTGGAACGATGATTTCTGCATCCCCATGCACCCTTATGGATTGGATGTTCGAAACTTGTCGGAAGAAGAGAACAGAGATGTGGAGCTTGCTCAGTTTCTTCTTGCAGCTGCAGAGAGAGTAGGGTGCCGGCAATTCGAACGTGCCAGCCGCTTACTCCTCCATTGTCAATGGAATTCAGATGTCATCGCAAACGCTGCTCAGAGAGTTATCTTTCACTTCGCCGAAGCGCTTCGCCAAAGGATCAACAAAGAAACCGGAAGGGTAATGGAAGTTGTAATGTCATCATACTATGATACTCAGAATCAGAATCAGAATCAGAATCAGAATAAGAATGAAGAAACTGAAATGATTCGAAAGATGAGTGTGAATGAGTCTCTTAAGTGCCATCAGAAACTGCCTTTCAATCAAGTAACCGCCATTGGAACTTGCGCAGAGAAGAAGAAAATAGAAGGTACAGGACAAAGGTTAACGAGTTTTGCCGAGTCACTGAACCTGCCGTTTTCATATAAGGCGATTATCGTGACAGATTTGGCAGAAATCAAGTTGGATGATTTCGACGTGGACGACGATGAAGGCGTTGCTGTGTACTCTGCGTATTTTCTTAGGACTCTGGTTTCAAGGCCTAATTGCTTGGAAAATTTGATGCTGGTTATAAGGAATATAAAACCGTCAATTATGATAGTGCTGGAGATAGACTCAAATCATAACTCGCCTTCTTTTGTGAACCGATTCATCGATGCGTTGTTCTACTTTTCAGCATTCATGGATTGTCTTGAAACGTGCCTGAAAGAAGATAGCGAGTGCAGAATGGCGGTGGAAGCAGTGTGTGCCGCGGGGATAAGAAACATTGTCGCTGCTGAAGGCAAAGAAAGGACAGTTAGGAATGTGAAGTTAGATGTTTGGAGAAGGTTCTTCGCGAGGTATAAAATGGTGGAAACAGGGTTCAGTGAATCGTCGCTTTACCAAGCTAACTTGGTTGCTAAGGAGTTTACTTTTGGTAAGTTCTGCAGCGTCGACAAAAATGGTAAGAGTCTAATTGTTTCATGGAAGGGAGCTCCAATGCATTCACTCTCAGCTTGGAAGTTTGTATGA 1611 0.4258 MGIGPLSSTPFNFSGFQGGYDSVNIHEEKFVLQEKQGFSAVMELGRGDNLFKHQQHHQRKHDHDDEDIKVGDMILQDVINFDPDYDSLQPTSQEFQETIEFKNIHQAPSSLTIASLELLRNYGSKFKKLTGENISDNFSSDNIENSTCSENQRLSTEEIMRVAGARYVHYSAHWNDDFCIPMHPYGLDVRNLSEEENRDVELAQFLLAAAERVGCRQFERASRLLLHCQWNSDVIANAAQRVIFHFAEALRQRINKETGRVMEVVMSSYYDTQNQNQNQNQNKNEETEMIRKMSVNESLKCHQKLPFNQVTAIGTCAEKKKIEGTGQRLTSFAESLNLPFSYKAIIVTDLAEIKLDDFDVDDDEGVAVYSAYFLRTLVSRPNCLENLMLVIRNIKPSIMIVLEIDSNHNSPSFVNRFIDALFYFSAFMDCLETCLKEDSECRMAVEAVCAAGIRNIVAAEGKERTVRNVKLDVWRRFFARYKMVETGFSESSLYQANLVAKEFTFGKFCSVDKNGKSLIVSWKGAPMHSLSAWKFV 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g00603 536 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 49 312 IPR005202 -
Adu06g00603 536 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 310 534 IPR005202 -
Adu06g00603 536 Pfam GRAS domain family 305 534 IPR005202 -
Adu06g00603 536 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 49 312 - -
Adu06g00603 536 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 310 534 - -
Adu06g00603 536 ProSiteProfiles GRAS family profile. 193 534 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g00603 Adu-Chr6 7262587 7264261 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g00603 192 535 GRAS Transcription Factor Family AT2G01570 26.471 4.16e-33 131
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Adu06g00603 GRAS 1.1e-49 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g00603 - - ahf:112695737 1009.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu06g00603 06 7262587 7264261 Adu06g00603 06 7262587 7264261 ECH