Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g00601 ATGGACGCCAATGTATCCACTAAACTTGAATCAGAAGAAACTTCTGAGGAGCTCAAATCATCAGAAACTCAGGCATCCAAGAAAAGGAAAATGGTTGAGAAAACTGTTGTGAGGGTGAGGATAGGAGAGGGAAACAATATCAGCAGACTGAAGAATGAAGGGCTACCTTCAGATTTTTGGTCTTGGAGGAAATATGGACAAAAGCCAATCAAAGGGTCTCCATATCCAAGGGGTTATTACAGATGCAGCACATCAAAGGGTTGTTCAGCGAAGAAGCAAGTAGAGAGATGCAGAACAGATGCTTCAATGATCATCATCACATACACCTCTACACATAATCACCCTTCTCCTGATGCAATAATCTCCACCCAGAATTTATCACAAAAACCAAAAGAACAAGAAGGTGGAGAAACCACAGAAGAAGAACTCTCAAAGGTGGAAGAACAAGAACAAGAACATGAACATGAACATGAGCATGAACAGGTTGAAGAAGAGCACAGCACGGATCATGAGAAGCCAAGTACTACTACTGTGTCTATGGCCACGGCTGATGAGAAGAGTTTCCATTACTTGCAGTCTCCAATAAGCAGCCATGAAGATATTGTTGTTGTAGACCAAGAAGATCCATTCAAGCTAAGCAGTGAGAAAAGCCATGAAAGAATAGATCTTTTGTTAGAAGAGGAAGAGCCACTATGCTATGCACAGATCAAGAACTTGACAACGAAAAAATCAGATGAACTTGATTTCTTCGATGAGCTTGAGGAGTTGCCCATGTCTTCACCTTTCTTGCACTTCACGAGGAGCATTTTATCCGATGAAAGGATTCCCGTGCACGCATGTAATTGGGGTTGGACTGTTGGAGTTGGAAGACATGAGGGAGAGGATGGAGGAATGGGGGGGCCAATGGCATTGGATGTTACATTTGGTTTTTATTGA 936 0.4241 MDANVSTKLESEETSEELKSSETQASKKRKMVEKTVVRVRIGEGNNISRLKNEGLPSDFWSWRKYGQKPIKGSPYPRGYYRCSTSKGCSAKKQVERCRTDASMIIITYTSTHNHPSPDAIISTQNLSQKPKEQEGGETTEEELSKVEEQEQEHEHEHEHEQVEEEHSTDHEKPSTTTVSMATADEKSFHYLQSPISSHEDIVVVDQEDPFKLSSEKSHERIDLLLEEEEPLCYAQIKNLTTKKSDELDFFDELEELPMSSPFLHFTRSILSDERIPVHACNWGWTVGVGRHEGEDGGMGGPMALDVTFGFY 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g00601 311 Coils Coil 136 165 - -
Adu06g00601 311 MobiDBLite consensus disorder prediction 113 132 - -
Adu06g00601 311 Pfam WRKY DNA -binding domain 58 115 IPR003657 GO:0003700|GO:0006355|GO:0043565
Adu06g00601 311 ProSiteProfiles WRKY domain profile. 51 117 IPR003657 GO:0003700|GO:0006355|GO:0043565
Adu06g00601 311 MobiDBLite consensus disorder prediction 1 31 - -
Adu06g00601 311 MobiDBLite consensus disorder prediction 133 172 - -
Adu06g00601 311 SUPERFAMILY WRKY DNA-binding domain 52 117 IPR036576 GO:0003700|GO:0006355|GO:0043565
Adu06g00601 311 SMART WRKY_cls 56 116 IPR003657 GO:0003700|GO:0006355|GO:0043565
Adu06g00601 311 MobiDBLite consensus disorder prediction 113 178 - -
Adu06g00601 311 Gene3D WRKY domain 43 118 IPR036576 GO:0003700|GO:0006355|GO:0043565
Adu06g00601 311 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 14 265 IPR044810 GO:0003700
Adu06g00601 311 PANTHER WRKY TRANSCRIPTION FACTOR 69-RELATED 14 265 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g00601 Adu-Chr6 7248501 7250251 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g00601 27 117 WRKY Transcription Factor Family AT2G34830 67.033 2.71e-36 133
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Adu06g00601 WRKY 2.8e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g00601 - - adu:107492378 473.396
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu06g00601 06 7248501 7250251 Adu06g00601 06 7248501 7250251 ECH