Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g00596 ATGTCGAAGAGGAAGTTCGGATTTGACGGTTTCGGCATAAACCGCCAATCCACCTACAACTTCGAGCGATCCCAAGCTCCTCAGCGCCTCTACGTCCCTCCTTCTTCACGCCACGGCCACGACAATTACGAGGACACCGACCTCGACAACATCGATTACGACGACAACGACGCCGCCGGGAACGACAACAAAGCTGCCGGCGATGGAGGAGGTGGCAATAATGGTGGCGACGAGGAAATCGATCCGCTGGACGCCTTCATGGAAGGGATTCACGAAGAGATGAGGACGGCGGCGCCTCCTCCGAAGCCAAAGGAGAAGGCGGAGGACAGGTACAAGGACGATGAGGAGGATGATCCAATGGAGAGCTTCTTGAGGGCGAAGAAGGACCTAGGGTTGACGTTGGCCTCGGAGGCTCTGCACGCTGGCTACGATTCTGATGAAGAGGTTTATGCTGCTGCTAAGGCTGTGGATGCCGGTATGATAGAGTATGATTCTGATGATAATCCTATAGTTCTTGACAAGAAGAAGATCGAACCCATTCCTCCACTTGATCACAGTGCTATTGACTATGAGCCCTTCAATAAGGATTTCTATGAGGAGGCACCTTCAATTTCAGGTATGAGTGAGCAAGATGTCACTGAGTACCGGAAGAGTTTGGCTATTCGTGTGTCGGGATTTGATGTGCCTAAGCCAATAAAGACATTTGAGGACTGTGGGTTCTCTCAGCAAATTATGGGTGCTATAAAGAAACAAGGTTATGAGAAGCCAACGTCTATACAGTGCCAAGCTTTACCAGTTATTCTTTCCGGTAGAGATATCATTGGCATTGCAAAAACTGGTTCTGGTAAAACTGCTGCTTTTGTGCTTCCTATGATTGTGCATATCATGGATCAGCCTGAACTTCAGAAGGAAGAGGGTCCTATAGGAGTTATATGCGCACCTACAAGAGAATTGGCACATCAGATATATCTTGAGTCCAAGAAATTTGCAAAAGCATATGGTATACGTGTGTCTGCTGTCTATGGTGGAATGTCAAAACTTGAACAGTTCAAAGAACTCAAGGCAGGTTGTGAGATAGTAGTTGCCACCCCTGGGAGATTGATAGACATGCTAAAAATGAAGGCCTTGACAATGACTAGAGCAACTTACCTGGTGCTTGATGAGGCTGACCGGATGTTTGATCTTGGATTTGAGCCACAAGTAAGGTCCATTGTTGGTCAGATTAGGCCGGATCGTCAGACTTTACTTTTTTCTGCGACAATGCCTCGTAAAGTTGAAAAGTTGGCTAGAGAGATCCTTAGTGATCCTGTTAGAGTAACAGTTGGGGAGGTGGGAATGGCAAATGAAGACATTACTCAAGTTGTCCATGTAATTCCTTCTGATGCTGAAAAATTGCCTTGGCTTTTGGAGAAGTTGCCCGAGATGATCGATCAAGGTGATGTCCTAGTATTTGCTTCCAAGAAGGCTACTGTGGATGAAATTGAATCACAATTGGCTCAGAGAGGCTTTAAAGTTGCTGCCCTGCATGGTGATAAAGATCAAGCTTCTCGCATGGAAACTTTGCAGAAGTTTAAAGCTGGTGTCTACCATGTGCTTATTGCAACTGATGTTGCTGCTCGTGGTCTTGATATCAAGTCAATTAAATCTGTGGTAAACTTTGATATTGCAAAAGATATGGATATGCATGTCCATCGGATTGGGAGAACAGGCCGTGCTGGTGACAAGGATGGGGTTGCATACACTCTTATAACTCAAAAAGAAGCACGCTTTGCTGGCGAACTGGTTAATAGCTTGATTGCTGCTGGTCAGAATGTATCCATGGAGTTGATGGATCTTGCTATGAAGGATGGGAGGTTCAGGTCAAAACGTGATGCAAGAAAAGGAGGTGGGAAAAAAGGCAAAGGGAGAGGAGGAGGTGGTGGTGGTGGCGGTGGCGGCCGGGGTGTGCGTGGAGTTGATTTTGGCCTTGGTATTGGATATAATCCCGAGTCCAACAATGCTTCATCTAACACCCCTCCGAGCCGCTCTGCTGCGGTAAATTCTTTACGAACAGGAATGATGTCACAGTTTCGGAGTAGCTTTGTTGCTGCTTCCTCTAACTCCCAAAATCAAGGATACAATAACAATACAAGTATGGCTGCAAATAAGAGACCTGCACTTCGCGGTTTTGTATCTGGTGGATCAATTGGCGGGGATATAAATTCTCATAATAATGCTGCTTCACCCAGTCCTGCTACAGCAGCAGTAAACTCCGGTGGCCCAAATTCCGGTGTAAACCCTGCTCAGAACAACTCAAACAGCTCTAAACCCAGAGAAAGGAGGAGGCCATCAGGCTGGGATAGATCCGATATGTCGATCAGATTCGCCCTATGCTTATCGCTCTTCATCGCACTTCATTCTATTTCAGCTGCTTCTGCTGATTCCATCTATGGCTGCGGCGGCTTCGTCGAGGCGAGCTCATCGCTGGTGAAATCGAGGAGGCAAAGTGATTCCAAATTGGATTATTCTCATGTCACGGTTGAGCTTCAAACAGTGGATGGACTGGTAAAGGATAGAACACAGTGTGCTCCAAATGGATACTACTTTATTCCAGTTTATGACAAGGGTTCCTTTGTAATTAAAATTAATGGACCTGAAGGATGGGCATGGGATCCAGAGAAGGTTCCAGTGGTGGTTGACGATAAAGGTTGTAATGGCAATGAAGATATCAATTTTCATTTCACAGGGTTTACTATATCTGGTAGAGTTGTTGGAGCTGTAGGTGGAGGAAGCTGTTCAGTTAAAAATGGTGGTCCTTCAAATGTAAAAGTTGAGCTATTGTCCCCTGCTGGGGATGTTGTCTCTGCTGTCTTAACTTCTCCATCAGGGAATTACTTGTTTAAAAATATAATTCCAGGAAAATATGAACTACGAGCTTCAAGTCCTAATATGAAAGTTGAAGTTAAAGGTTCAACCCAGGTGGAGTTGGGCTTTGGAAATGGTGTAGTTGATGATGTGTTCTTTGTCCCTGGGTATAGTATCAGTGGTTTTGTTGTTGCTCAGGGAAATCCAATATTAGGGGTACATGTTTTCCTATATTCAGATGATGTTTCTGAGGTAGAATGTTTACAAGGTTCTCCAAATGGTCCACGAGAAGGGGTAGCTCTCTGTCATGCTATGTCCGATGCTGATGGAAAGTTCACATTCAATTCTGTACCTTGTGGAAGTTATGAACTCGTACCTTACTATAAGGGTGAAAATACAGTATTTGATGTTTCACCGTCCAGCGTCTCGGTTAATGTTAAGCATCAACATGTAACGGTGCCTCAGAAATTCCAGGTAACTGGGTTTTCTCTTGGAGGCCGTGTGGTTGATGGAAATGAAATGGGAGTGGAGGGTGTTAAAATTATAGTGGATGGTCATGACAGGTCTATTACGGATAATCAAGGATATTATAAGCTTGATCAGGTGACATCCAAGCATTATAGCATTGAAGCCAAAAAGGAGCATTACAAATTCAGGAAGTTGGAGAATTATATGGTTTTGCCAAATATGGCTTCAATAGAAGACATTAATGCCATTTCATATGACCTTTGTGGCTCAGTTAGGTCAGTTAGTGGTGGTCCGAAAGCCAAGGTGGCTTTGACTCATGGACCTGAGAATGTGAAACCACAAAAGAAGCAAACAGATGGAAATGGAAGATTCTGCTTTGAGGTTGTGCCTGGTGAATATCGGTTATCAGCTATTGCTGAGAATGCTCCTGGGCTCATGTTTATGCCGTCATATATTGATGTTGTGGTCAAAAGTCCATTGTTAAATGTAGAATTTTCACAGGCTCTGGTCAATATTCGCGGTGCTGTATCCTGCAAGGAGAAATGTGGTCCATCTGTATCTGTTACTCTTGTCAAGGTTGACAAACATAATGAAGATAGAAAGACAATTAAATTGACCACCGAGAGTAGTGAATTTCTGTTTTCAGATGTTATTCCTGGAAAGTATAGACTTGAGGTCAAACATAGTTCCCCTGAAGCAGTGACTTCAAAGGATGATTGGTGCTGGGAGCAGAGCTTCATTGATGTAAATCTTGGAGCTGAGGACTTGGAAGGAATTACATTTGTTCAGAAAGGCTACTGGGTCAATATTATCTCAACTCATAATGTTGATGGTTACTTGACTCAACCCGATGGGTCAAATGTGAATTTGAAGATCAAGAAAGGTTCCCAGAAAATATGTGTAGAATATCCAGGAGTACATGAATTTAAATATGTAGACTCGTGTGTCTTCTTTGGGAGCTCATCTGTGAAAATTGATACATCTGTTCTGTCGCCTGTCCATCTAAAAGGAGAGAAGTATCTTCTTAAAGGACAAATAAATGTGCAGCCCAGCTCACTTGATTCATTACCCAAGAGCATAGTTGTGGACATTAAAAATGGTGGAGCTGGTGGTGTTGATTCTGCTACAGCCAAACTTAAATCCCATGAAAAAGATCAAACAAATACTGCTATCTACGAGTACTCTTTTTGGGCCAATCTTGGAGAAAAGCTTACCTTTATTCCTCGGGACTCAAGGAATGATGGGGAGAAAAAACTTCTGTTTTACCCTAGAGAGCATCATATATCAGTGGCAGATGATAATTGTCAAACTTATATTCCTACGTTTTCTTCTCGACCGGGAGTATATATTGAAGGATCAGTTTCTCCTCCTCTTTCTGGAGTCCATATCAAGCTTGTTGCAGCTGGAGAGAGTAGCATTACTGCACTTAAAAGTGGTGAAATAGTACTTGAAACATCAACTGGGGCTGATGGCACCTTTGTGGCAGGTCCTCTGTATGATGATGTTGGTTACAATGTTGAAGCCTCAAAGCCTGGCTATCATTTAAAACAAGTTGGACCTTATTCCTTTAGTTGTCAGAAGCTTAGTCAAATTTCAGTGCTTATACATCACAAGGATGATGTTAGAGAACCCATTCCTTCTGTTCTGCTATCTTTGAGTGGTGACAATGGTTATAGAAACAACTCGGTATCTGGTGATGGAGGGTCATTCCTGTTTGATAATTTGTTTCCTGGAACATTCTATTTGCGTCCTGTTTTGAAGGAGTATGCTTTCTCACCTTCAGCACAGGCAATAGAGCTTGGAGGAGGGGAATTTAAAGAAGTTGTTTTTCAGGCGACTCGTGTAGCATACAGTGCTACTGGCTTCGTCACACTGTTGTCTGGCCAGCCCAAAGGAGGAGTGTCAGTTGAAGCTCGGGCAGAGTCAAAAGGTTATTTCGAGGAAGCTGTGACAGATTCTTCTGGGAATTACCGTCTCAGAGGACTACTGCCTGATACAGTCTATGCTGTTAAAGTAGCTAAAAGGGATGTTCTAGGCAGTTCAAACATAGAGCGTGCTTCTCCTGATTCTATTCCTGTCAAGGTTGGAACTGAGGATATCAGGGGTTTAGATTTCGTAGTTTTTGAGGAGCCAGAAATTACAATTGTTAGTTGCCATGTTGAAGGAAATGGTACTAAGGAACTGCATAAACACCTGATGGTAGAAATTAAGTCAGCTAGTGACCCAAATAAGATAGAGTCTGTCTTCCCCCTACCAATTTCTAACTACTTTCAAGTGAAGGGTTTATCTAAAGGCAGACACCTTCTGCAACTCCGGTCTGGCCTCCCTTCGAGTTCCCTTAAATTTGAATCCGACATCATTGAGGTAGATTTGGAGAAAGATACTCAAATCCATGTAGGCCCACTGAGATACAAGATCGACGATCAGATGAAGCAGGAGCTGACGCCCGCACCAGTATTCCCTCTTATAGCTGGATTATTTTTCATTGCACTATTCCTCAGCATTCCAAGATTGAAGGATCTGTATCAAGCAACTGTAGATATACCCACACCAGGACTCGCTGCTACTTCAAGAAAGGACACAAGGAAGACAACGATGCGGAAGAAGACATATTAG 5928 0.4361 MSKRKFGFDGFGINRQSTYNFERSQAPQRLYVPPSSRHGHDNYEDTDLDNIDYDDNDAAGNDNKAAGDGGGGNNGGDEEIDPLDAFMEGIHEEMRTAAPPPKPKEKAEDRYKDDEEDDPMESFLRAKKDLGLTLASEALHAGYDSDEEVYAAAKAVDAGMIEYDSDDNPIVLDKKKIEPIPPLDHSAIDYEPFNKDFYEEAPSISGMSEQDVTEYRKSLAIRVSGFDVPKPIKTFEDCGFSQQIMGAIKKQGYEKPTSIQCQALPVILSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELQKEEGPIGVICAPTRELAHQIYLESKKFAKAYGIRVSAVYGGMSKLEQFKELKAGCEIVVATPGRLIDMLKMKALTMTRATYLVLDEADRMFDLGFEPQVRSIVGQIRPDRQTLLFSATMPRKVEKLAREILSDPVRVTVGEVGMANEDITQVVHVIPSDAEKLPWLLEKLPEMIDQGDVLVFASKKATVDEIESQLAQRGFKVAALHGDKDQASRMETLQKFKAGVYHVLIATDVAARGLDIKSIKSVVNFDIAKDMDMHVHRIGRTGRAGDKDGVAYTLITQKEARFAGELVNSLIAAGQNVSMELMDLAMKDGRFRSKRDARKGGGKKGKGRGGGGGGGGGGRGVRGVDFGLGIGYNPESNNASSNTPPSRSAAVNSLRTGMMSQFRSSFVAASSNSQNQGYNNNTSMAANKRPALRGFVSGGSIGGDINSHNNAASPSPATAAVNSGGPNSGVNPAQNNSNSSKPRERRRPSGWDRSDMSIRFALCLSLFIALHSISAASADSIYGCGGFVEASSSLVKSRRQSDSKLDYSHVTVELQTVDGLVKDRTQCAPNGYYFIPVYDKGSFVIKINGPEGWAWDPEKVPVVVDDKGCNGNEDINFHFTGFTISGRVVGAVGGGSCSVKNGGPSNVKVELLSPAGDVVSAVLTSPSGNYLFKNIIPGKYELRASSPNMKVEVKGSTQVELGFGNGVVDDVFFVPGYSISGFVVAQGNPILGVHVFLYSDDVSEVECLQGSPNGPREGVALCHAMSDADGKFTFNSVPCGSYELVPYYKGENTVFDVSPSSVSVNVKHQHVTVPQKFQVTGFSLGGRVVDGNEMGVEGVKIIVDGHDRSITDNQGYYKLDQVTSKHYSIEAKKEHYKFRKLENYMVLPNMASIEDINAISYDLCGSVRSVSGGPKAKVALTHGPENVKPQKKQTDGNGRFCFEVVPGEYRLSAIAENAPGLMFMPSYIDVVVKSPLLNVEFSQALVNIRGAVSCKEKCGPSVSVTLVKVDKHNEDRKTIKLTTESSEFLFSDVIPGKYRLEVKHSSPEAVTSKDDWCWEQSFIDVNLGAEDLEGITFVQKGYWVNIISTHNVDGYLTQPDGSNVNLKIKKGSQKICVEYPGVHEFKYVDSCVFFGSSSVKIDTSVLSPVHLKGEKYLLKGQINVQPSSLDSLPKSIVVDIKNGGAGGVDSATAKLKSHEKDQTNTAIYEYSFWANLGEKLTFIPRDSRNDGEKKLLFYPREHHISVADDNCQTYIPTFSSRPGVYIEGSVSPPLSGVHIKLVAAGESSITALKSGEIVLETSTGADGTFVAGPLYDDVGYNVEASKPGYHLKQVGPYSFSCQKLSQISVLIHHKDDVREPIPSVLLSLSGDNGYRNNSVSGDGGSFLFDNLFPGTFYLRPVLKEYAFSPSAQAIELGGGEFKEVVFQATRVAYSATGFVTLLSGQPKGGVSVEARAESKGYFEEAVTDSSGNYRLRGLLPDTVYAVKVAKRDVLGSSNIERASPDSIPVKVGTEDIRGLDFVVFEEPEITIVSCHVEGNGTKELHKHLMVEIKSASDPNKIESVFPLPISNYFQVKGLSKGRHLLQLRSGLPSSSLKFESDIIEVDLEKDTQIHVGPLRYKIDDQMKQELTPAPVFPLIAGLFFIALFLSIPRLKDLYQATVDIPTPGLAATSRKDTRKTTMRKKTY 1975
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g00596 1975 MobiDBLite consensus disorder prediction 661 678 - -
Adu06g00596 1975 Pfam Helicase conserved C-terminal domain 469 573 IPR001650 -
Adu06g00596 1975 SUPERFAMILY Starch-binding domain-like 1001 1092 IPR013784 GO:0030246
Adu06g00596 1975 ProSitePatterns DEAD-box subfamily ATP-dependent helicases signature. 385 393 IPR000629 -
Adu06g00596 1975 PANTHER CARBOXYPEPTIDASE REGULATORY REGION-CONTAINING 786 1967 - -
Adu06g00596 1975 MobiDBLite consensus disorder prediction 734 779 - -
Adu06g00596 1975 SMART helicmild6 492 573 IPR001650 -
Adu06g00596 1975 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 233 261 IPR014014 GO:0003724
Adu06g00596 1975 MobiDBLite consensus disorder prediction 13 31 - -
Adu06g00596 1975 Gene3D Immunoglobulins 926 990 IPR013783 -
Adu06g00596 1975 MobiDBLite consensus disorder prediction 734 767 - -
Adu06g00596 1975 MobiDBLite consensus disorder prediction 1 81 - -
Adu06g00596 1975 MobiDBLite consensus disorder prediction 618 678 - -
Adu06g00596 1975 SUPERFAMILY Carboxypeptidase regulatory domain-like 1110 1177 IPR008969 -
Adu06g00596 1975 SUPERFAMILY Cna protein B-type domain 1646 1700 - -
Adu06g00596 1975 Gene3D - 196 443 IPR027417 -
Adu06g00596 1975 Gene3D - 446 626 IPR027417 -
Adu06g00596 1975 Gene3D - 1115 1188 - -
Adu06g00596 1975 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 380 611 IPR027417 -
Adu06g00596 1975 SUPERFAMILY Cna protein B-type domain 929 980 - -
Adu06g00596 1975 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 216 442 IPR027417 -
Adu06g00596 1975 Pfam DEAD/DEAH box helicase 257 428 IPR011545 GO:0003676|GO:0005524
Adu06g00596 1975 CDD DEADc_DDX42 244 440 - -
Adu06g00596 1975 MobiDBLite consensus disorder prediction 93 118 - -
Adu06g00596 1975 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 464 613 IPR001650 -
Adu06g00596 1975 CDD SF2_C_DEAD 451 583 - -
Adu06g00596 1975 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 264 439 IPR014001 -
Adu06g00596 1975 SMART ultradead3 252 454 IPR014001 -
Adu06g00596 1975 PANTHER NODAL MODULATOR 1-RELATED 786 1967 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g00596 Adu-Chr6 7177042 7195703 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g00596 233 590 Eukaryotic Initiation Factors Gene Family AT3G13920 34.903 1.32e-60 213
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g00596 - - ccaj:109814730 2001.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu06g00596 06 7177042 7195703 Adu06g00596 06 7177042 7195703 ECH