Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Adu06g00596 | ATGTCGAAGAGGAAGTTCGGATTTGACGGTTTCGGCATAAACCGCCAATCCACCTACAACTTCGAGCGATCCCAAGCTCCTCAGCGCCTCTACGTCCCTCCTTCTTCACGCCACGGCCACGACAATTACGAGGACACCGACCTCGACAACATCGATTACGACGACAACGACGCCGCCGGGAACGACAACAAAGCTGCCGGCGATGGAGGAGGTGGCAATAATGGTGGCGACGAGGAAATCGATCCGCTGGACGCCTTCATGGAAGGGATTCACGAAGAGATGAGGACGGCGGCGCCTCCTCCGAAGCCAAAGGAGAAGGCGGAGGACAGGTACAAGGACGATGAGGAGGATGATCCAATGGAGAGCTTCTTGAGGGCGAAGAAGGACCTAGGGTTGACGTTGGCCTCGGAGGCTCTGCACGCTGGCTACGATTCTGATGAAGAGGTTTATGCTGCTGCTAAGGCTGTGGATGCCGGTATGATAGAGTATGATTCTGATGATAATCCTATAGTTCTTGACAAGAAGAAGATCGAACCCATTCCTCCACTTGATCACAGTGCTATTGACTATGAGCCCTTCAATAAGGATTTCTATGAGGAGGCACCTTCAATTTCAGGTATGAGTGAGCAAGATGTCACTGAGTACCGGAAGAGTTTGGCTATTCGTGTGTCGGGATTTGATGTGCCTAAGCCAATAAAGACATTTGAGGACTGTGGGTTCTCTCAGCAAATTATGGGTGCTATAAAGAAACAAGGTTATGAGAAGCCAACGTCTATACAGTGCCAAGCTTTACCAGTTATTCTTTCCGGTAGAGATATCATTGGCATTGCAAAAACTGGTTCTGGTAAAACTGCTGCTTTTGTGCTTCCTATGATTGTGCATATCATGGATCAGCCTGAACTTCAGAAGGAAGAGGGTCCTATAGGAGTTATATGCGCACCTACAAGAGAATTGGCACATCAGATATATCTTGAGTCCAAGAAATTTGCAAAAGCATATGGTATACGTGTGTCTGCTGTCTATGGTGGAATGTCAAAACTTGAACAGTTCAAAGAACTCAAGGCAGGTTGTGAGATAGTAGTTGCCACCCCTGGGAGATTGATAGACATGCTAAAAATGAAGGCCTTGACAATGACTAGAGCAACTTACCTGGTGCTTGATGAGGCTGACCGGATGTTTGATCTTGGATTTGAGCCACAAGTAAGGTCCATTGTTGGTCAGATTAGGCCGGATCGTCAGACTTTACTTTTTTCTGCGACAATGCCTCGTAAAGTTGAAAAGTTGGCTAGAGAGATCCTTAGTGATCCTGTTAGAGTAACAGTTGGGGAGGTGGGAATGGCAAATGAAGACATTACTCAAGTTGTCCATGTAATTCCTTCTGATGCTGAAAAATTGCCTTGGCTTTTGGAGAAGTTGCCCGAGATGATCGATCAAGGTGATGTCCTAGTATTTGCTTCCAAGAAGGCTACTGTGGATGAAATTGAATCACAATTGGCTCAGAGAGGCTTTAAAGTTGCTGCCCTGCATGGTGATAAAGATCAAGCTTCTCGCATGGAAACTTTGCAGAAGTTTAAAGCTGGTGTCTACCATGTGCTTATTGCAACTGATGTTGCTGCTCGTGGTCTTGATATCAAGTCAATTAAATCTGTGGTAAACTTTGATATTGCAAAAGATATGGATATGCATGTCCATCGGATTGGGAGAACAGGCCGTGCTGGTGACAAGGATGGGGTTGCATACACTCTTATAACTCAAAAAGAAGCACGCTTTGCTGGCGAACTGGTTAATAGCTTGATTGCTGCTGGTCAGAATGTATCCATGGAGTTGATGGATCTTGCTATGAAGGATGGGAGGTTCAGGTCAAAACGTGATGCAAGAAAAGGAGGTGGGAAAAAAGGCAAAGGGAGAGGAGGAGGTGGTGGTGGTGGCGGTGGCGGCCGGGGTGTGCGTGGAGTTGATTTTGGCCTTGGTATTGGATATAATCCCGAGTCCAACAATGCTTCATCTAACACCCCTCCGAGCCGCTCTGCTGCGGTAAATTCTTTACGAACAGGAATGATGTCACAGTTTCGGAGTAGCTTTGTTGCTGCTTCCTCTAACTCCCAAAATCAAGGATACAATAACAATACAAGTATGGCTGCAAATAAGAGACCTGCACTTCGCGGTTTTGTATCTGGTGGATCAATTGGCGGGGATATAAATTCTCATAATAATGCTGCTTCACCCAGTCCTGCTACAGCAGCAGTAAACTCCGGTGGCCCAAATTCCGGTGTAAACCCTGCTCAGAACAACTCAAACAGCTCTAAACCCAGAGAAAGGAGGAGGCCATCAGGCTGGGATAGATCCGATATGTCGATCAGATTCGCCCTATGCTTATCGCTCTTCATCGCACTTCATTCTATTTCAGCTGCTTCTGCTGATTCCATCTATGGCTGCGGCGGCTTCGTCGAGGCGAGCTCATCGCTGGTGAAATCGAGGAGGCAAAGTGATTCCAAATTGGATTATTCTCATGTCACGGTTGAGCTTCAAACAGTGGATGGACTGGTAAAGGATAGAACACAGTGTGCTCCAAATGGATACTACTTTATTCCAGTTTATGACAAGGGTTCCTTTGTAATTAAAATTAATGGACCTGAAGGATGGGCATGGGATCCAGAGAAGGTTCCAGTGGTGGTTGACGATAAAGGTTGTAATGGCAATGAAGATATCAATTTTCATTTCACAGGGTTTACTATATCTGGTAGAGTTGTTGGAGCTGTAGGTGGAGGAAGCTGTTCAGTTAAAAATGGTGGTCCTTCAAATGTAAAAGTTGAGCTATTGTCCCCTGCTGGGGATGTTGTCTCTGCTGTCTTAACTTCTCCATCAGGGAATTACTTGTTTAAAAATATAATTCCAGGAAAATATGAACTACGAGCTTCAAGTCCTAATATGAAAGTTGAAGTTAAAGGTTCAACCCAGGTGGAGTTGGGCTTTGGAAATGGTGTAGTTGATGATGTGTTCTTTGTCCCTGGGTATAGTATCAGTGGTTTTGTTGTTGCTCAGGGAAATCCAATATTAGGGGTACATGTTTTCCTATATTCAGATGATGTTTCTGAGGTAGAATGTTTACAAGGTTCTCCAAATGGTCCACGAGAAGGGGTAGCTCTCTGTCATGCTATGTCCGATGCTGATGGAAAGTTCACATTCAATTCTGTACCTTGTGGAAGTTATGAACTCGTACCTTACTATAAGGGTGAAAATACAGTATTTGATGTTTCACCGTCCAGCGTCTCGGTTAATGTTAAGCATCAACATGTAACGGTGCCTCAGAAATTCCAGGTAACTGGGTTTTCTCTTGGAGGCCGTGTGGTTGATGGAAATGAAATGGGAGTGGAGGGTGTTAAAATTATAGTGGATGGTCATGACAGGTCTATTACGGATAATCAAGGATATTATAAGCTTGATCAGGTGACATCCAAGCATTATAGCATTGAAGCCAAAAAGGAGCATTACAAATTCAGGAAGTTGGAGAATTATATGGTTTTGCCAAATATGGCTTCAATAGAAGACATTAATGCCATTTCATATGACCTTTGTGGCTCAGTTAGGTCAGTTAGTGGTGGTCCGAAAGCCAAGGTGGCTTTGACTCATGGACCTGAGAATGTGAAACCACAAAAGAAGCAAACAGATGGAAATGGAAGATTCTGCTTTGAGGTTGTGCCTGGTGAATATCGGTTATCAGCTATTGCTGAGAATGCTCCTGGGCTCATGTTTATGCCGTCATATATTGATGTTGTGGTCAAAAGTCCATTGTTAAATGTAGAATTTTCACAGGCTCTGGTCAATATTCGCGGTGCTGTATCCTGCAAGGAGAAATGTGGTCCATCTGTATCTGTTACTCTTGTCAAGGTTGACAAACATAATGAAGATAGAAAGACAATTAAATTGACCACCGAGAGTAGTGAATTTCTGTTTTCAGATGTTATTCCTGGAAAGTATAGACTTGAGGTCAAACATAGTTCCCCTGAAGCAGTGACTTCAAAGGATGATTGGTGCTGGGAGCAGAGCTTCATTGATGTAAATCTTGGAGCTGAGGACTTGGAAGGAATTACATTTGTTCAGAAAGGCTACTGGGTCAATATTATCTCAACTCATAATGTTGATGGTTACTTGACTCAACCCGATGGGTCAAATGTGAATTTGAAGATCAAGAAAGGTTCCCAGAAAATATGTGTAGAATATCCAGGAGTACATGAATTTAAATATGTAGACTCGTGTGTCTTCTTTGGGAGCTCATCTGTGAAAATTGATACATCTGTTCTGTCGCCTGTCCATCTAAAAGGAGAGAAGTATCTTCTTAAAGGACAAATAAATGTGCAGCCCAGCTCACTTGATTCATTACCCAAGAGCATAGTTGTGGACATTAAAAATGGTGGAGCTGGTGGTGTTGATTCTGCTACAGCCAAACTTAAATCCCATGAAAAAGATCAAACAAATACTGCTATCTACGAGTACTCTTTTTGGGCCAATCTTGGAGAAAAGCTTACCTTTATTCCTCGGGACTCAAGGAATGATGGGGAGAAAAAACTTCTGTTTTACCCTAGAGAGCATCATATATCAGTGGCAGATGATAATTGTCAAACTTATATTCCTACGTTTTCTTCTCGACCGGGAGTATATATTGAAGGATCAGTTTCTCCTCCTCTTTCTGGAGTCCATATCAAGCTTGTTGCAGCTGGAGAGAGTAGCATTACTGCACTTAAAAGTGGTGAAATAGTACTTGAAACATCAACTGGGGCTGATGGCACCTTTGTGGCAGGTCCTCTGTATGATGATGTTGGTTACAATGTTGAAGCCTCAAAGCCTGGCTATCATTTAAAACAAGTTGGACCTTATTCCTTTAGTTGTCAGAAGCTTAGTCAAATTTCAGTGCTTATACATCACAAGGATGATGTTAGAGAACCCATTCCTTCTGTTCTGCTATCTTTGAGTGGTGACAATGGTTATAGAAACAACTCGGTATCTGGTGATGGAGGGTCATTCCTGTTTGATAATTTGTTTCCTGGAACATTCTATTTGCGTCCTGTTTTGAAGGAGTATGCTTTCTCACCTTCAGCACAGGCAATAGAGCTTGGAGGAGGGGAATTTAAAGAAGTTGTTTTTCAGGCGACTCGTGTAGCATACAGTGCTACTGGCTTCGTCACACTGTTGTCTGGCCAGCCCAAAGGAGGAGTGTCAGTTGAAGCTCGGGCAGAGTCAAAAGGTTATTTCGAGGAAGCTGTGACAGATTCTTCTGGGAATTACCGTCTCAGAGGACTACTGCCTGATACAGTCTATGCTGTTAAAGTAGCTAAAAGGGATGTTCTAGGCAGTTCAAACATAGAGCGTGCTTCTCCTGATTCTATTCCTGTCAAGGTTGGAACTGAGGATATCAGGGGTTTAGATTTCGTAGTTTTTGAGGAGCCAGAAATTACAATTGTTAGTTGCCATGTTGAAGGAAATGGTACTAAGGAACTGCATAAACACCTGATGGTAGAAATTAAGTCAGCTAGTGACCCAAATAAGATAGAGTCTGTCTTCCCCCTACCAATTTCTAACTACTTTCAAGTGAAGGGTTTATCTAAAGGCAGACACCTTCTGCAACTCCGGTCTGGCCTCCCTTCGAGTTCCCTTAAATTTGAATCCGACATCATTGAGGTAGATTTGGAGAAAGATACTCAAATCCATGTAGGCCCACTGAGATACAAGATCGACGATCAGATGAAGCAGGAGCTGACGCCCGCACCAGTATTCCCTCTTATAGCTGGATTATTTTTCATTGCACTATTCCTCAGCATTCCAAGATTGAAGGATCTGTATCAAGCAACTGTAGATATACCCACACCAGGACTCGCTGCTACTTCAAGAAAGGACACAAGGAAGACAACGATGCGGAAGAAGACATATTAG | 5928 | 0.4361 | MSKRKFGFDGFGINRQSTYNFERSQAPQRLYVPPSSRHGHDNYEDTDLDNIDYDDNDAAGNDNKAAGDGGGGNNGGDEEIDPLDAFMEGIHEEMRTAAPPPKPKEKAEDRYKDDEEDDPMESFLRAKKDLGLTLASEALHAGYDSDEEVYAAAKAVDAGMIEYDSDDNPIVLDKKKIEPIPPLDHSAIDYEPFNKDFYEEAPSISGMSEQDVTEYRKSLAIRVSGFDVPKPIKTFEDCGFSQQIMGAIKKQGYEKPTSIQCQALPVILSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELQKEEGPIGVICAPTRELAHQIYLESKKFAKAYGIRVSAVYGGMSKLEQFKELKAGCEIVVATPGRLIDMLKMKALTMTRATYLVLDEADRMFDLGFEPQVRSIVGQIRPDRQTLLFSATMPRKVEKLAREILSDPVRVTVGEVGMANEDITQVVHVIPSDAEKLPWLLEKLPEMIDQGDVLVFASKKATVDEIESQLAQRGFKVAALHGDKDQASRMETLQKFKAGVYHVLIATDVAARGLDIKSIKSVVNFDIAKDMDMHVHRIGRTGRAGDKDGVAYTLITQKEARFAGELVNSLIAAGQNVSMELMDLAMKDGRFRSKRDARKGGGKKGKGRGGGGGGGGGGRGVRGVDFGLGIGYNPESNNASSNTPPSRSAAVNSLRTGMMSQFRSSFVAASSNSQNQGYNNNTSMAANKRPALRGFVSGGSIGGDINSHNNAASPSPATAAVNSGGPNSGVNPAQNNSNSSKPRERRRPSGWDRSDMSIRFALCLSLFIALHSISAASADSIYGCGGFVEASSSLVKSRRQSDSKLDYSHVTVELQTVDGLVKDRTQCAPNGYYFIPVYDKGSFVIKINGPEGWAWDPEKVPVVVDDKGCNGNEDINFHFTGFTISGRVVGAVGGGSCSVKNGGPSNVKVELLSPAGDVVSAVLTSPSGNYLFKNIIPGKYELRASSPNMKVEVKGSTQVELGFGNGVVDDVFFVPGYSISGFVVAQGNPILGVHVFLYSDDVSEVECLQGSPNGPREGVALCHAMSDADGKFTFNSVPCGSYELVPYYKGENTVFDVSPSSVSVNVKHQHVTVPQKFQVTGFSLGGRVVDGNEMGVEGVKIIVDGHDRSITDNQGYYKLDQVTSKHYSIEAKKEHYKFRKLENYMVLPNMASIEDINAISYDLCGSVRSVSGGPKAKVALTHGPENVKPQKKQTDGNGRFCFEVVPGEYRLSAIAENAPGLMFMPSYIDVVVKSPLLNVEFSQALVNIRGAVSCKEKCGPSVSVTLVKVDKHNEDRKTIKLTTESSEFLFSDVIPGKYRLEVKHSSPEAVTSKDDWCWEQSFIDVNLGAEDLEGITFVQKGYWVNIISTHNVDGYLTQPDGSNVNLKIKKGSQKICVEYPGVHEFKYVDSCVFFGSSSVKIDTSVLSPVHLKGEKYLLKGQINVQPSSLDSLPKSIVVDIKNGGAGGVDSATAKLKSHEKDQTNTAIYEYSFWANLGEKLTFIPRDSRNDGEKKLLFYPREHHISVADDNCQTYIPTFSSRPGVYIEGSVSPPLSGVHIKLVAAGESSITALKSGEIVLETSTGADGTFVAGPLYDDVGYNVEASKPGYHLKQVGPYSFSCQKLSQISVLIHHKDDVREPIPSVLLSLSGDNGYRNNSVSGDGGSFLFDNLFPGTFYLRPVLKEYAFSPSAQAIELGGGEFKEVVFQATRVAYSATGFVTLLSGQPKGGVSVEARAESKGYFEEAVTDSSGNYRLRGLLPDTVYAVKVAKRDVLGSSNIERASPDSIPVKVGTEDIRGLDFVVFEEPEITIVSCHVEGNGTKELHKHLMVEIKSASDPNKIESVFPLPISNYFQVKGLSKGRHLLQLRSGLPSSSLKFESDIIEVDLEKDTQIHVGPLRYKIDDQMKQELTPAPVFPLIAGLFFIALFLSIPRLKDLYQATVDIPTPGLAATSRKDTRKTTMRKKTY | 1975 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Adu06g00596 | 1975 | MobiDBLite | consensus disorder prediction | 661 | 678 | - | - | |
Adu06g00596 | 1975 | Pfam | Helicase conserved C-terminal domain | 469 | 573 | IPR001650 | - | |
Adu06g00596 | 1975 | SUPERFAMILY | Starch-binding domain-like | 1001 | 1092 | IPR013784 | GO:0030246 | |
Adu06g00596 | 1975 | ProSitePatterns | DEAD-box subfamily ATP-dependent helicases signature. | 385 | 393 | IPR000629 | - | |
Adu06g00596 | 1975 | PANTHER | CARBOXYPEPTIDASE REGULATORY REGION-CONTAINING | 786 | 1967 | - | - | |
Adu06g00596 | 1975 | MobiDBLite | consensus disorder prediction | 734 | 779 | - | - | |
Adu06g00596 | 1975 | SMART | helicmild6 | 492 | 573 | IPR001650 | - | |
Adu06g00596 | 1975 | ProSiteProfiles | DEAD-box RNA helicase Q motif profile. | 233 | 261 | IPR014014 | GO:0003724 | |
Adu06g00596 | 1975 | MobiDBLite | consensus disorder prediction | 13 | 31 | - | - | |
Adu06g00596 | 1975 | Gene3D | Immunoglobulins | 926 | 990 | IPR013783 | - | |
Adu06g00596 | 1975 | MobiDBLite | consensus disorder prediction | 734 | 767 | - | - | |
Adu06g00596 | 1975 | MobiDBLite | consensus disorder prediction | 1 | 81 | - | - | |
Adu06g00596 | 1975 | MobiDBLite | consensus disorder prediction | 618 | 678 | - | - | |
Adu06g00596 | 1975 | SUPERFAMILY | Carboxypeptidase regulatory domain-like | 1110 | 1177 | IPR008969 | - | |
Adu06g00596 | 1975 | SUPERFAMILY | Cna protein B-type domain | 1646 | 1700 | - | - | |
Adu06g00596 | 1975 | Gene3D | - | 196 | 443 | IPR027417 | - | |
Adu06g00596 | 1975 | Gene3D | - | 446 | 626 | IPR027417 | - | |
Adu06g00596 | 1975 | Gene3D | - | 1115 | 1188 | - | - | |
Adu06g00596 | 1975 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 380 | 611 | IPR027417 | - | |
Adu06g00596 | 1975 | SUPERFAMILY | Cna protein B-type domain | 929 | 980 | - | - | |
Adu06g00596 | 1975 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 216 | 442 | IPR027417 | - | |
Adu06g00596 | 1975 | Pfam | DEAD/DEAH box helicase | 257 | 428 | IPR011545 | GO:0003676|GO:0005524 | |
Adu06g00596 | 1975 | CDD | DEADc_DDX42 | 244 | 440 | - | - | |
Adu06g00596 | 1975 | MobiDBLite | consensus disorder prediction | 93 | 118 | - | - | |
Adu06g00596 | 1975 | ProSiteProfiles | Superfamilies 1 and 2 helicase C-terminal domain profile. | 464 | 613 | IPR001650 | - | |
Adu06g00596 | 1975 | CDD | SF2_C_DEAD | 451 | 583 | - | - | |
Adu06g00596 | 1975 | ProSiteProfiles | Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. | 264 | 439 | IPR014001 | - | |
Adu06g00596 | 1975 | SMART | ultradead3 | 252 | 454 | IPR014001 | - | |
Adu06g00596 | 1975 | PANTHER | NODAL MODULATOR 1-RELATED | 786 | 1967 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Adu06g00596 | Adu-Chr6 | 7177042 | 7195703 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Adu06g00596 | 233 | 590 | Eukaryotic Initiation Factors Gene Family | AT3G13920 | 34.903 | 1.32e-60 | 213 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Adu06g00596 | - | - | ccaj:109814730 | 2001.1 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Adu06g00596 | 06 | 7177042 | 7195703 | Adu06g00596 | 06 | 7177042 | 7195703 | ECH |