Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g00594 ATGCAGGTTCCTAAATTCTTTTTCTTCAAGGTTTCAATGCTAATAATTGGTCTTACAAGTGTTTGTAAATGCGAGGATTGTAGGAAACCACCGAAGACGATTACTGTTAGTCAATCAGGAAATGCAAACTTCAAAACAGTTCAAAGTGCCATTGATTCTGTCCCCTCAGGAAACTCTCAATGGGTTCATATCCAAATTTCCCCAGGCGTTTACAGAGAAAAGGTGGTAATTGAGAGCGACAAACCTTGCATATATCTTAAAGGAGGCGGCGGGGGTTCCACCAGTATTGAATGGAATGACCACGGCAATGCACATTTCACTGCTACTTTCAACATTAAAGCATCGAACATTGTTGCAAACGCCATTGCCTTCAAGAACACATATAACACTGTAGACACAGGCAAGGTGGTTCAAGCAGTAGCAGCAAGGGTTCATGAAGACAAAATTGCTTTCTACGATTGTCAATTTATAGGGGTACAAGATACCCTGTTCGATTCATATGGCCGCCATTACTATAAGGGTTGTTACATTCAGGGTGGAGTTGACTTCATCTTTGGGAGTGGTCAATCAATGTTTGAGGGAAGCACGCTATTTTTCTCAATGGGACTTGGTCCCAAAGTAGATGGGGTTTTCACAGCAAACAAAAGGGAAGAAGATGACAACAGCGGCTATGTGTTCAAGAATTGCAACATAACTGGAACTGGAGGAAAAGCCATTCTTGGAAGATCTTTGAATGCTTATGGCAGAGTTATTGTTGCCAATTCTGTGCTTTCAGATGTCGTTAGACCAGAGGGTTGGGAATCTTTGCACCACAATGTATCAAAGATAACGTTTGTAGAAGAGGGAAACGCAGGACCAGGAGCAAACACATCTTATCGTGTGCCATGGACGAAACATTTAAGGGCCTCTGGCCTTCATCAATTCTTGGACATGTCTTTTATTGACAAAGAAGGCTGGATTGCTAATATTCCCTCGTTATGA 981 0.42 MQVPKFFFFKVSMLIIGLTSVCKCEDCRKPPKTITVSQSGNANFKTVQSAIDSVPSGNSQWVHIQISPGVYREKVVIESDKPCIYLKGGGGGSTSIEWNDHGNAHFTATFNIKASNIVANAIAFKNTYNTVDTGKVVQAVAARVHEDKIAFYDCQFIGVQDTLFDSYGRHYYKGCYIQGGVDFIFGSGQSMFEGSTLFFSMGLGPKVDGVFTANKREEDDNSGYVFKNCNITGTGGKAILGRSLNAYGRVIVANSVLSDVVRPEGWESLHHNVSKITFVEEGNAGPGANTSYRVPWTKHLRASGLHQFLDMSFIDKEGWIANIPSL 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g00594 326 Gene3D - 28 325 IPR012334 -
Adu06g00594 326 SUPERFAMILY Pectin lyase-like 30 321 IPR011050 -
Adu06g00594 326 Pfam Pectinesterase 34 314 IPR000070 GO:0030599|GO:0042545
Adu06g00594 326 PANTHER PECTINESTERASE 7 325 - -
Adu06g00594 326 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 7 325 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g00594 Adu-Chr6 7170558 7172562 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g00594 6 268 Carbohydrate Esterase AT2G19150 45.353 5.92e-68 213
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g00594 - - adu:107492287 673.315