Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g00589 ATGGTGAATTTCAGCGGAGACCCTCACAGTTACACTCAACCTCAAACCCAAGACAACAGCAACCACTTCAACCACCCTAACGGCAACTACAACTGCCACAACGGGGTCAATGCCTTCCCCAACCCTAACCCAATCGATTCTCCTGCTTCTGGATATAACCATTCACGTCCACCCCGCAAGCGAGCTTGGACTTCTACTTCTCCAGATCAAGCAGATGGTGCGTGTCATGTAAAAGTTTATGTTGCACCGGTTCCAAGAACAGCTACCGAGACTGATATCCGCCTGGTGTTTGAAGGGCATGGGACTATTGTTGAGGTTGTTCTTTTAAAAGATAAGAGAACTGGTGGACGACAAGGAAGTTGTTTTGTGAAATATGCAACATTAGATGAAGCTGAGAGAGCCATTAAGGCTTTAAACAATAAGTATACATTTCCTGGGGAATCATCTCCTGTTGTTGTCAGATATGCTGATCGGGAACGTGAACGGCTTGGGGTTCGAACATTTGTACGGAACGTGGAAAAGAAAGATCCTTCAGAAGAGGTTGCTGATAAAGTATTTGTTAGTTGCATCAACAAAGAAGCTTCGAGAAACGAAATAGAAGAAATATTTTCTGCTTATGGACATATAGAAGATGTCTACCTGCACAATCGTGGATATGCTTTTGTCAAATTTTCTAATAGAGAAATGGCGTTGGCGGCAATCAAAGGGCTGAACAACACATTCACAATGAGAGGTTGTGATCATCCATTAATTGTTCGTTTTGCGGAGCCAAAGAAACCAAAGACTGGAGATCCAAGGTTTTACTGTTTGCCCCTTTACATTTCACACAACTCTATATTCATGACAGTCTTTGTTATTAATATATTAATGCAAAACTACACGACATGTTTATTTGTGCCAGTGCCAAATTTCGGTGATCCAAATACTAGAGGAAGTATTATGCCTATGGCTCCACATCGTTCTACTATTGCACACCCACAAGTTTCTTCTCATATGCAGAATTGGGAACCTGGGGCTAACATGGTGCCCCAGCCATTTCCTATCCAACAGCCACATTCACAATTGACTTCGATGCCTTTGCAGTGCAATCAAGCTCCAAAGATGTCTTCTCAACCATTTTATCCTGAGGTGCAGAGACAGTTGCATCCAACAGATTTGTCAGTGCAAAATATAGAGCAGCAGCCAAGTTCACAGACACCTACTCAGAGTGTAAGCAATTCTAATACAGTTGCTGGCAGTATTTCACCTGATATGCCTACTAGTCCTGTAGATGAAGATTTTCCCGAGTGTGAGTGGAGTGAGCACTACTGCCCTGATGGTCATACTTACTACTACAATTGCGTCACTTGTGAAAGCAAATGGGAAAAACCTGAGGAGTATGCTCTCTATGAGAGAGGGTCTCTGAAGCAGCAAAAGCATGAGGATCATAAAGAATCGCAGGAGCTGCAGGAGCACGATGATCATAAAGATTCGCAGAAGCTGCATGAGCTCAAGGATCATGAAGATTCACGGAACCTGCAGGAACACGTGAATCATAAAGATTTTCAGAAACTGCAAGAGCACGAGGATCATAAAGATTTACAGAAGCTGCAAGAGCACGGGGATTATAATGATTCACAGAGGCAGCAAGAGCACAGGGATCATACTGATTCACGGAAGCAGCAAGAGCACGAAGATCATAAAGATTTGCAGAGGCTGCAGGAGCATGAGGATCATAAAGATTTGCAGAGGCTGCAGGAGCACGAGGATCATAATGGTTCACAGAGGCAACAAGGGCACGGGGATCATAATGATTCACAGAAGCCACAAGAGAACGAGGATCATAAAGAATCACAGCATCAGCAAGAGCATGAGGATCATAAATATTCACAGAAGCAGCAAGAGAACGAGGATCATAAAGAATCACAGAAGCTGCAAGAGCTTGAGGATGACAGCTGTCTTTTGTCACAATTATCATTATCCTCCTCTGCACAAGTTGCTCAAAGCCAAAAGGAAACAGATAATGATCAAGGGCACTCAAAAGCAAGTTCTGTTGTTGGAGAGGGGTGA 2049 0.4344 MVNFSGDPHSYTQPQTQDNSNHFNHPNGNYNCHNGVNAFPNPNPIDSPASGYNHSRPPRKRAWTSTSPDQADGACHVKVYVAPVPRTATETDIRLVFEGHGTIVEVVLLKDKRTGGRQGSCFVKYATLDEAERAIKALNNKYTFPGESSPVVVRYADRERERLGVRTFVRNVEKKDPSEEVADKVFVSCINKEASRNEIEEIFSAYGHIEDVYLHNRGYAFVKFSNREMALAAIKGLNNTFTMRGCDHPLIVRFAEPKKPKTGDPRFYCLPLYISHNSIFMTVFVINILMQNYTTCLFVPVPNFGDPNTRGSIMPMAPHRSTIAHPQVSSHMQNWEPGANMVPQPFPIQQPHSQLTSMPLQCNQAPKMSSQPFYPEVQRQLHPTDLSVQNIEQQPSSQTPTQSVSNSNTVAGSISPDMPTSPVDEDFPECEWSEHYCPDGHTYYYNCVTCESKWEKPEEYALYERGSLKQQKHEDHKESQELQEHDDHKDSQKLHELKDHEDSRNLQEHVNHKDFQKLQEHEDHKDLQKLQEHGDYNDSQRQQEHRDHTDSRKQQEHEDHKDLQRLQEHEDHKDLQRLQEHEDHNGSQRQQGHGDHNDSQKPQENEDHKESQHQQEHEDHKYSQKQQENEDHKESQKLQELEDDSCLLSQLSLSSSAQVAQSQKETDNDQGHSKASSVVGEG 682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g00589 682 MobiDBLite consensus disorder prediction 390 416 - -
Adu06g00589 682 PANTHER RNA BINDING PROTEIN 326 488 - -
Adu06g00589 682 PANTHER RNA BINDING PROTEIN 49 409 - -
Adu06g00589 682 Gene3D - 66 164 IPR012677 -
Adu06g00589 682 PANTHER FLOWERING TIME CONTROL PROTEIN FCA 326 488 - -
Adu06g00589 682 MobiDBLite consensus disorder prediction 390 426 - -
Adu06g00589 682 SUPERFAMILY WW domain 432 462 IPR036020 GO:0005515
Adu06g00589 682 SMART rrm1_1 184 253 IPR000504 GO:0003723
Adu06g00589 682 SMART rrm1_1 78 154 IPR000504 GO:0003723
Adu06g00589 682 SMART ww_5 427 459 IPR001202 GO:0005515
Adu06g00589 682 CDD WW 430 459 IPR001202 GO:0005515
Adu06g00589 682 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 183 257 IPR000504 GO:0003723
Adu06g00589 682 ProSiteProfiles WW/rsp5/WWP domain profile. 432 459 IPR001202 GO:0005515
Adu06g00589 682 Coils Coil 624 644 - -
Adu06g00589 682 Pfam WW domain 431 457 IPR001202 GO:0005515
Adu06g00589 682 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 77 158 IPR000504 GO:0003723
Adu06g00589 682 MobiDBLite consensus disorder prediction 467 491 - -
Adu06g00589 682 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 79 144 IPR000504 GO:0003723
Adu06g00589 682 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 185 242 IPR000504 GO:0003723
Adu06g00589 682 MobiDBLite consensus disorder prediction 517 641 - -
Adu06g00589 682 MobiDBLite consensus disorder prediction 1 70 - -
Adu06g00589 682 MobiDBLite consensus disorder prediction 1 50 - -
Adu06g00589 682 Gene3D - 416 486 - -
Adu06g00589 682 Gene3D - 170 263 IPR012677 -
Adu06g00589 682 SUPERFAMILY RNA-binding domain, RBD 41 165 IPR035979 GO:0003676
Adu06g00589 682 PANTHER FLOWERING TIME CONTROL PROTEIN FCA 49 409 - -
Adu06g00589 682 MobiDBLite consensus disorder prediction 642 666 - -
Adu06g00589 682 SUPERFAMILY RNA-binding domain, RBD 177 263 IPR035979 GO:0003676
Adu06g00589 682 MobiDBLite consensus disorder prediction 517 682 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g00589 Adu-Chr6 7085222 7091156 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g00589 79 259 Eukaryotic Initiation Factors Gene Family AT1G71770 27.320 2.21e-09 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g00589 K13207 - gmx:100776162 578.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu06g00589 06 7085222 7091156 Adu06g00589 06 7085222 7091156 ECH