Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g00556 ATGAGTTGTTTCAGCTGTTGTGAAGGCGATGACTTGCACAATACTACTGATAGTGGAGCGCCGTTTGCTGTGAAAAATTCAGCAGGAAACGATGGAAATCATCATGCTTCAGAAACTGCAAAGCAGGGTGCTCAAACTGTTAAAGTTCAGCCCATTGAAGTTCCTGCTATACCAGTGGATGAACTAAAAGAAATTACAGATAACTTTGGGGAAAATGCTCTGATTGGAGAGGGTTCCTATGGAAGAGTATATCATGGTGTTCTTAAAAGTGGGCAGACTGCCGCAATAAAGAAGTTAGATGCCAGTAAACAGCCTGACGATGAATTTTTAGCCCAGGTTTCAATGGTTTCACGGTTGAAGCATGACAATTTTGTTCAATTGCTTGGTTATTGTGTTGATGGAAACTCCCGTGTTCTTGCTTATGAGTATGCATCTAATGGGTCTCTGCATGATATTCTACACGGCAGAAAAGGTGTTAAAGGAGCAAAACCTGGTCCTGTTTTGACCTGGGCACAGAGAGTTAAAattgctgtaggggctgcaaaagggcttgagtacttgcatgagaaggctgatcctcacattatccaccgggatatcaagtcaagcaatgttctaatatttgatgatgatgttgcaaaaattgcagattttgatttgtcaaaTCAGGCCCCTGACATGGCAGCACGTCTTCATTCCACTCGTGTCCTTGGAACCTTCGGTTATCATGCACCAGAATATGCAATGACTGGGCAATTGAATGCTAAGAGTGATGTATACAGTTTTGGTGTTGTCCTTCTGGAGCTTTTGACAGGAAGAAAACCCGTTGATCATACATTACCACGTGGGCAGCAGAGCCTAGTTACTTGGGCTACTCCAAAACTCAGTGAGGATAAAGTCAGGCAGTGTGTAGATGCAAGACTAGGAGGAGAATACCCCCCCAAAGCTGTTGCTAAGTTGGCTGCTGTTGCTGCATTGTGTGTGCAATACGAAGCTGATTTCAGACCAAACATGAGCATTGTAGTCAAAGCTCTGCAACCTTTGTTGAATGCACGACCTGGCCCTGCTGATCTCTCCTCTCTCCTCTCTTGTCTCGCAATCGAGGTCATCGCCGACGTTTCAACGCCTCGCGGTCTTTCCTGGGCTCCTCCTCACCGGCGACAGAAGCACTCGTCGGATCGTCGTCTTCTGGTTTCAAGTAATCGCCATCGCGAGTCACCGTGGATTGTGGACCATTGTAGGGTCGTCACTCGTCACTTGCTTCGTCGCTCGTCCTCTTCTGGGGTCGGGTCCTCTTCGTCACCCAATCAGTTTAGCAGGGTAGGTATGGCAGTAATGCCAATGATGACTAGGCAGCATGTGCTGACCTACGTCTACCTTCTACTTTACATATCTCTTTCATCGGGAGTTATTCTGTACAACAAGTGGCTCCTCTCCACATTGCACTTTAATTTTCCATTTCCAATAACGCTCACTATGATCCATATGGCCTTTTCTGGTTCAGTGTCCTTTTTGCTTATTCGTGTTCTTAAGGTTGTATCACCGGTTAAAATGACATTTAATATATATGCTACTTGTGTGGTCCCTATAAGCGCCTTCTTTGCAGCAAGTCTGTGGTTTGGGAACACGGCATATTTATACATTTCTGTGGCCTTCATCCAGATGCTTAAGGCCCTGATGCCAGTGGCAACATTTCTCACGGCTGTTGGCTGTGGGACTGAGAAATTAAGGTGTGATGTATTCACGAACATGGTGCTGATCAGCTTTGGAGTAGTCATTTCCTCCTATGGGGAAATTCATTTTAATGTGCTTGGTACACTTTACCAGGTCACAGGAATAATTGCTGAAGCTTTGAGGCTGGTCTTAACTCAAGTTCTTCTCCAGAAGAAGGGCTTGACACTAAACCCAATTACAAGCTTGTATTACATAGCACCCTGCAGCTTTGGATTTCTTTTTATCCCATGGTATATCCTTGAGAAGCCTGAGATGGAAGATCCACATCTGCAGTTTGACTTCTGGATTTTTTTTACAAACGCTCTTTGTGCTCTGGCATTGAATCTGTCAACATTTGTGGTGATTGGTAGAACCGGAGCAGTAACTATTCGAGTGGCTGGGGTTTTGAAAGACTGGATACTTATAAGTCTTTCAACTGTCTTATTTCCTGAATCAAAGATTACTCCGCTTAATATCATTGGTTATGCTATAGCTCTAAGTGGTGTTGTTTTTTATAACTACCTGAAGCTCAATGAAGTACGCATATCTCAACCTCCTCCCCAAAGTATTCAAGATGACTCAGCTAAGGAGGACCTACTCCTAAGCGAGAAAAAGGCAGATGACGGTTTGAACAGCAAAGACAGGACCTCATGGAATGATTCTGTTTATGATAATGATTTTGACGAAGAAGCACCTTTAATGTCGTCTAAACGGATATCTCATCCGCATCTTGGAAGAAAGCCAGCTTAG 2463 0.4182 MSCFSCCEGDDLHNTTDSGAPFAVKNSAGNDGNHHASETAKQGAQTVKVQPIEVPAIPVDELKEITDNFGENALIGEGSYGRVYHGVLKSGQTAAIKKLDASKQPDDEFLAQVSMVSRLKHDNFVQLLGYCVDGNSRVLAYEYASNGSLHDILHGRKGVKGAKPGPVLTWAQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSEDKVRQCVDARLGGEYPPKAVAKLAAVAALCVQYEADFRPNMSIVVKALQPLLNARPGPADLSSLLSCLAIEVIADVSTPRGLSWAPPHRRQKHSSDRRLLVSSNRHRESPWIVDHCRVVTRHLLRRSSSSGVGSSSSPNQFSRVGMAVMPMMTRQHVLTYVYLLLYISLSSGVILYNKWLLSTLHFNFPFPITLTMIHMAFSGSVSFLLIRVLKVVSPVKMTFNIYATCVVPISAFFAASLWFGNTAYLYISVAFIQMLKALMPVATFLTAVGCGTEKLRCDVFTNMVLISFGVVISSYGEIHFNVLGTLYQVTGIIAEALRLVLTQVLLQKKGLTLNPITSLYYIAPCSFGFLFIPWYILEKPEMEDPHLQFDFWIFFTNALCALALNLSTFVVIGRTGAVTIRVAGVLKDWILISLSTVLFPESKITPLNIIGYAIALSGVVFYNYLKLNEVRISQPPPQSIQDDSAKEDLLLSEKKADDGLNSKDRTSWNDSVYDNDFDEEAPLMSSKRISHPHLGRKPA 820
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g00556 820 ProSitePatterns Protein kinases ATP-binding region signature. 75 98 IPR017441 GO:0005524
Adu06g00556 820 SMART serkin_6 69 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu06g00556 820 ProSitePatterns Serine/Threonine protein kinases active-site signature. 195 207 IPR008271 GO:0004672|GO:0006468
Adu06g00556 820 MobiDBLite consensus disorder prediction 774 796 - -
Adu06g00556 820 Gene3D Phosphorylase Kinase; domain 1 29 143 - -
Adu06g00556 820 Gene3D Transferase(Phosphotransferase) domain 1 144 354 - -
Adu06g00556 820 ProSiteProfiles Protein kinase domain profile. 69 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu06g00556 820 MobiDBLite consensus disorder prediction 774 793 - -
Adu06g00556 820 Pfam Triose-phosphate Transporter family 458 744 IPR004853 -
Adu06g00556 820 SUPERFAMILY Protein kinase-like (PK-like) 48 345 IPR011009 -
Adu06g00556 820 Pfam Protein tyrosine and serine/threonine kinase 74 345 IPR001245 GO:0004672|GO:0006468
Adu06g00556 820 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 1 354 - -
Adu06g00556 820 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 1 354 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g00556 Adu-Chr6 6612150 6626426 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g00556 448 817 Organic Solute Cotransporters AT3G17430 72.973 3.17e-178 515
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIII Adu06g00556 TPT 3.5e-22 CL0184
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g00556 K13436 - tcc:18613791 654.825
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu06g00556 06 6612150 6626426 Adu09g01010 09 18532882 18536502 PCT