Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g00555 ATGACTGCTGAGGCCACCACCTCCAAAGGCACCGTGCTGGCTCGGTCGCTCAAGGAGGCTGAAATGCAGTATTCGTCGGCCAAGGTATCAGTGTGGTGGGACATAGAGAACTGCCCTGTGTCTCGTGGCTGCGACGCGCATTCGATCGCAAAGAACATCAGCTCCGCACTGGTTCGCATGAACTACTGCGGCCCCGTCTCCATCTCAGCGTACGGCGACACCAAACGCATTCCATCGTCCGTGCAGCACGCGCTCTCCAGCACCGGCATCTCCCTCAACCACGTTCCCGCAGGTGTGAAAGATGCAAGTGACAAGAAGATTTTAGTTGATATGTTATTCTGGGCGGTGGACAACCCTGCTCCTGCGAATTATTTGCTTATTTCCGGAGATAGGGACTTCTCGAATGCCCTGCATCAGCTGCGCATGAGAAGGTACAACATTCTTCTCGCTCAACCACTAAAAGCTTCGGTGTCCCTCACTGCTGCTGCTAGGAGTGTGTGGCTCTGGACTAGCCTTTCTGCCGGTGGGCCACCACTATCCAGTGGCAGCTCGTCAAACATTGCAAGTAATACCCAAAGCTTTAGTTCTGAAACGGTTCAAAACCGTGTTTCTGAACCATCTCAACCAAGATTCAAAGAAAAATACACCAACTGCGATGCAAGCCAATTTCCAGAGAGTAAGACTAAGAACAATCATTGCTCTAATCCGGAACTTCCACAGGCAAAGTTGTTTCCCAGGGCTCCCCATGAATTCTTTTGTAATAAGCCCAACATCGCAACTATTAGTTCTGCACTTAGTCTTCCAAGCCACCAAGATCACTCAAAAAGCAGTGCTAAATTTCTACGACCACCTTCTGAGTACGACCAACATCTTATAGGCTGCATTCTGTTAACTTTAGACACCCTGAAGACTGAAAAGGTTATGCCTACTCACGGAAATATTTCTGATTGCATTCGATATGGAGATGTGAGATATCAGACAATCGATGCCAGGAAGGCTTTAGATTGTGCAATAGAGCACGGAATGGTAGTAAAACAAAGCATAGGTTCATTGAATTTTTATGTTAACAAAAATGGGAAACTCTGGAAGTGTGTGAACCCAATAGGTGGTTATCCTAATGATTTCTCAGACGCAACATGGGCTAGAATACAGCAATTCCTTTCTTCACCAACTGGAAAATCGTCAATTTTGGCATCCCGTTGCAGATATGAAGCATCGCTTATTCTTAGGAGATCATGCATGGAGAAGGAGGTTTTAGGTGATGTACTTAAGATTCTGGAGATGATAATCTCGGTCAAGAAGTGGATTATACATAACCATTCCGGGGAGTGGCAGCCGATTACTATTACACTTGAGCAGAGTTGA 1365 0.4667 MTAEATTSKGTVLARSLKEAEMQYSSAKVSVWWDIENCPVSRGCDAHSIAKNISSALVRMNYCGPVSISAYGDTKRIPSSVQHALSSTGISLNHVPAGVKDASDKKILVDMLFWAVDNPAPANYLLISGDRDFSNALHQLRMRRYNILLAQPLKASVSLTAAARSVWLWTSLSAGGPPLSSGSSSNIASNTQSFSSETVQNRVSEPSQPRFKEKYTNCDASQFPESKTKNNHCSNPELPQAKLFPRAPHEFFCNKPNIATISSALSLPSHQDHSKSSAKFLRPPSEYDQHLIGCILLTLDTLKTEKVMPTHGNISDCIRYGDVRYQTIDARKALDCAIEHGMVVKQSIGSLNFYVNKNGKLWKCVNPIGGYPNDFSDATWARIQQFLSSPTGKSSILASRCRYEASLILRRSCMEKEVLGDVLKILEMIISVKKWIIHNHSGEWQPITITLEQS 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g00555 454 MobiDBLite consensus disorder prediction 178 211 - -
Adu06g00555 454 PANTHER ACID BINDING PROTEIN, PUTATIVE-RELATED 19 207 - -
Adu06g00555 454 Pfam NYN domain 28 163 IPR021139 GO:0004540
Adu06g00555 454 Gene3D - 20 171 - -
Adu06g00555 454 CDD PIN_limkain_b1_N_like 28 152 - -
Adu06g00555 454 PANTHER LIMKAIN B LKAP 19 207 IPR024768 GO:0005777|GO:0010468|GO:1903231
Adu06g00555 454 PANTHER LIMKAIN B LKAP 284 444 IPR024768 GO:0005777|GO:0010468|GO:1903231
Adu06g00555 454 PANTHER ACID BINDING PROTEIN, PUTATIVE-RELATED 284 444 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g00555 Adu-Chr6 6609255 6611514 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g00555 20 190 C2H2 Transcription Factor Family AT5G61190 76.023 4.82e-84 277
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g00555 - K17573 aip:107646579 520.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu06g00555 06 6609255 6611514 Adu06g00555 06 6609255 6611514 ECH