Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g00548 ATGGAGTGTGAACCTTTGTTAAGCACCTCCAAAATCATGGACAACCGCGATGTACAATACTTCGGACCTTCAAAATCCTTCAGCGATGTGGTAACCCTGACCCTGCAGAACACAGAGATAGAATCCTTGAATCAAAAGCAGCAACAGCCGCCATTGCCAGCTTCTTCGAAGAAGAAGAAACTGAGTCGTTGCAAAACTGCTCCAGCCATGATCACAATGAAAGAAGTGAAAAAGAAAGAAGCGGAAGTTCCAAAACCGCAAAGCAGCTCGGTGATCAGACAAGGGCTTATCTTGCTTGTGATATACCTGTCTATTGGAGTTGCCATATACTCCTTCAACAGGGAACGTTTCTCCGGCATTGAAACACACCCTGTGATCGACGCACTCTACTTCTGCATAGTCACCATGTGCACCATAGGGTACGGTGACATAGCTCCTCTGACCCCAGTCACAAAGGTCTTCGCTTGCGTCTTCGTCTTAGTTGGGTTTGGATTCATAGACATACTCTTAAGCGGTCTCGTCAACTATGTCTTGGATTTGCAAGAAAACACCATCCTTGCTGGCTTACAAATGGGGTCTCCGATTCATCAGGAACAGCAACAAGAAGCAGGGTTCTCAGCAAGGAATTACATTATTGACGTGGCAAAGGGGAGGATGAGGATAAGATTGAAGGTTGGTTTGGCTCTTGGTGTGGTTGTTCTTTGCATTGGGATTGGGGGTTTTGTGCTCTACTCTGTGGAGGGTTTGGATTGGGTTGATTCCATTTACTTGTCTGTTATGTCTGTTACAACAGTTGGTTATGGTGATAGAGCTTTCAAGACTCGTCAAGGTCGCTTGTTTGCGGCTATTTGGCTCTTGTTTTCGACCTTGATGGTTGCAAGGGCATTCTTGTATTTGGCTGAAGCTAGAATCGATAGAAGGCATAGAAGAATGGCTAAGAAGGTTTTGCATAGAGATATCACTGTTGATGATTGGCTTGCTGCTGATATCAACAACACTGGTTTCATCAGTAAGTCAGAGTATGTAATTTTCAAGCTGAAAGAAATGGGTAAAATACAGGAAAAAGATGTAATGCAAATATGTGACCAATTCAGGAAGCTTGACCCTTCTAACTGTGGCAAGATTACACTTCCTCATCTCTTGGGGGATAACTCATGA 1158 0.4413 MECEPLLSTSKIMDNRDVQYFGPSKSFSDVVTLTLQNTEIESLNQKQQQPPLPASSKKKKLSRCKTAPAMITMKEVKKKEAEVPKPQSSSVIRQGLILLVIYLSIGVAIYSFNRERFSGIETHPVIDALYFCIVTMCTIGYGDIAPLTPVTKVFACVFVLVGFGFIDILLSGLVNYVLDLQENTILAGLQMGSPIHQEQQQEAGFSARNYIIDVAKGRMRIRLKVGLALGVVVLCIGIGGFVLYSVEGLDWVDSIYLSVMSVTTVGYGDRAFKTRQGRLFAAIWLLFSTLMVARAFLYLAEARIDRRHRRMAKKVLHRDITVDDWLAADINNTGFISKSEYVIFKLKEMGKIQEKDVMQICDQFRKLDPSNCGKITLPHLLGDNS 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g00548 385 PANTHER TWO-PORE POTASSIUM CHANNEL 4-RELATED 44 380 - -
Adu06g00548 385 Gene3D - 69 202 - -
Adu06g00548 385 Gene3D - 207 325 - -
Adu06g00548 385 PRINTS Two pore domain K+ channel signature 134 162 IPR003280 GO:0005267|GO:0016020|GO:0071805
Adu06g00548 385 PRINTS Two pore domain K+ channel signature 263 272 IPR003280 GO:0005267|GO:0016020|GO:0071805
Adu06g00548 385 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 44 380 IPR003280 GO:0005267|GO:0016020|GO:0071805
Adu06g00548 385 SUPERFAMILY Voltage-gated potassium channels 92 181 - -
Adu06g00548 385 SUPERFAMILY EF-hand 324 379 IPR011992 -
Adu06g00548 385 ProSitePatterns EF-hand calcium-binding domain. 329 341 IPR018247 -
Adu06g00548 385 Pfam Ion channel 232 301 IPR013099 -
Adu06g00548 385 Pfam Ion channel 97 177 IPR013099 -
Adu06g00548 385 SUPERFAMILY Voltage-gated potassium channels 215 322 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g00548 Adu-Chr6 6567765 6569832 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g00548 56 383 Ion Channels AT4G01840 67.879 9.58e-160 453
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g00548 K05389 - gmx:100801488 543.502