Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g00546 ATGGAGGAGAAGCTCGCATCAATGGAAAAGAAGAAGCCACTGGAGGAGAAGCTCGTTGCTCACGCTCTACTCTTCTACTTGCAATTAGGTTTAGGTTGGGCTTTCTTCTACAGCGCAACCTTGATGGGCACCATGTGTGTGATAAGAACAAAACGTAGTGTCGTTAAGCCAGCTGAAGAGACACCATTGATCACACTAGACCTATCATTGATCGATAAGATACCTGTTCTAAGGTGCGATGCCAGAACGTTGCATGTGTTCAGGCATGGCCCTGAAGCTGCAAGTGTCATAAGAGAAGCCTTGTCTAGAGCATTGGTTCCTTACTACCCTCTTGCTGGGCGCCTCATTCACAAATCGGAACAAAATGATGAAGCAGGGTGCCTCCAAGTTCAATGCTCCGGGGACGGTGCCTGGTTTGTTGAGGCTTCTACTGATTGCACTCTTCAATCTCTTCATTTCTTTGATGACATTCAGTCTATTCCATATGATCATCTTCTTCCTGATGATGTTCCTCAAACCGAAGGCATTGACCCCCTTGTCAAAATGCAGGTGACACAATTTGGATGTGGAGGATTTGTGATAGGCCTCGTATTCTGCCACACCATATGCGATGGCCTTGAACACGCTACCGTAGACATCCCCATGCATCGAATCAACAACCTCAAGCAAGAATTTCAGCGGCTCACCGGACTCGCTTGCTCTTCCTTCGAAATCGTAGCCGCGGGATTATGGACAAGCAGAGCAAGAGCCATTGATTTCGAACCCAACGCCGAGCTGAAGCTTGTGTTCTTCGCTAACTGCCGTCAAATCTTGGACCCTCCTCTCCCCGCTGGCTTCTACGGCAACTGTTTCTTCCCAGTGACGATCACCGCTTCCTACGAGGCGCTCAGAGACGCATCGCTCTTCGATGTGGTGAAAATGATACAAGATGCAAAGACCAAATTACCCTCCGAGTTTGGAAAGTATTTGAAGGGAAGCCAGGTTTCTCATAATGCAGTTGGAAGTATAAGAACAGTAGCATCTTTCTGTGCTGAAGAAACAGTTATGAAGCTATACAGAAAGAAATATAAAGGTCCAATGGAAAAAGGAAAAAGAAAAGGGTTGATCAGTGGAATAGGATTTGGGGTTTCATTTTTCTTTCTCTACTGTGTCTATGCAACCTGTTTCTATGCTGGAGCTAGATTTGTGAAGGATGGCAAGACATCATTCGCAGATGTTTTAAGGGATTCAGTTGCTCCTGATTCTAGCAAAGTCAAGTCAGCGGCTGCTTCCATATTTGGACTACTTGATATGAAGTCAAAGATAGATCCAAATGATGAGTCTGATGTGATTGCTGTGGAAAAGGAAAGGCATGAGACTCTCATTAGTAAGGAGGAGGTATTTTATGCTTCCTTGCTCCAACTTCATTCTAGTGCCCAGTGCCCCAAGAGTTTAACAGTCGGTCAGTTAGAATCGCAAAATCGATTCTCATTCTATTCCTCCCTTTCGTCACGTTCTTGCTCTGCGTCTCAGAGAAGCAGTGTTAAGCACGCCAAATCGCCAGGCTTGAACCCTATGTGCTGCTGGCGCCGTAGCGGTGGCTCAACCTCTCCCAGTCTCGCACCATCTTCAACGCTCTCCTCTCTTCTCCTCTGTCAGTACTCTGCCTGTCCTGCTTCTCTCTCAATCTCTCCTTTCACTTCTCTTCTCGCTGCTGTGTTGTTGTTGTTGCTGCCGTTGGCTTTGCAGATCTTCTATGCTCCTTATCGATCGGTTTATTTTTGCTAG 1767 0.4646 MEEKLASMEKKKPLEEKLVAHALLFYLQLGLGWAFFYSATLMGTMCVIRTKRSVVKPAEETPLITLDLSLIDKIPVLRCDARTLHVFRHGPEAASVIREALSRALVPYYPLAGRLIHKSEQNDEAGCLQVQCSGDGAWFVEASTDCTLQSLHFFDDIQSIPYDHLLPDDVPQTEGIDPLVKMQVTQFGCGGFVIGLVFCHTICDGLEHATVDIPMHRINNLKQEFQRLTGLACSSFEIVAAGLWTSRARAIDFEPNAELKLVFFANCRQILDPPLPAGFYGNCFFPVTITASYEALRDASLFDVVKMIQDAKTKLPSEFGKYLKGSQVSHNAVGSIRTVASFCAEETVMKLYRKKYKGPMEKGKRKGLISGIGFGVSFFFLYCVYATCFYAGARFVKDGKTSFADVLRDSVAPDSSKVKSAAASIFGLLDMKSKIDPNDESDVIAVEKERHETLISKEEVFYASLLQLHSSAQCPKSLTVGQLESQNRFSFYSSLSSRSCSASQRSSVKHAKSPGLNPMCCWRRSGGSTSPSLAPSSTLSSLLLCQYSACPASLSISPFTSLLAAVLLLLLPLALQIFYAPYRSVYFC 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g00546 588 PANTHER ACYL TRANSFERASE 4 44 208 - -
Adu06g00546 588 PANTHER ACYL TRANSFERASE 4 206 328 - -
Adu06g00546 588 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 332 407 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Adu06g00546 588 Pfam Transferase family 224 314 - -
Adu06g00546 588 Pfam Transferase family 49 206 - -
Adu06g00546 588 Gene3D - 43 207 IPR023213 -
Adu06g00546 588 Gene3D - 208 350 IPR023213 -
Adu06g00546 588 Pfam ABC transporter transmembrane region 326 406 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Adu06g00546 588 SUPERFAMILY ABC transporter transmembrane region 328 431 IPR036640 GO:0005524|GO:0016021
Adu06g00546 588 PANTHER ACYL TRANSFERASE 4 44 208 - -
Adu06g00546 588 PANTHER ACYL TRANSFERASE 4 206 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g00546 Adu-Chr6 6535452 6543781 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g00546 53 206 Monolignol Biosynthesis Gene Families AT5G48930 35.802 4.03e-18 85.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g00546 - - aip:107646575 554.673