Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g00545 ATGGGCCGTGAGAACGGTTACAAACGTGATGATGAGACAAGTTCATCAGAGAACCAAAAAGAAACAGTTCCATACTTCAAGCTGTTCTCGTTTGCAGATTCCACTGACATCTTGTTGATGATTGTTGGGACCATTGCCGCCATTGGAAATGGTATGGGAATGCCTCTCATGACATTAATATTTGGCCAAATGGCAAACGTCTTCGCTGATAACCTGTACAGTGAAGATATTGTCAACCAAGTTTCCAAGATCAGTCTGAAATTTGTGTACTTGGCAATAGGCATAGGTGTTGCAGCATTCCTTCAGGTGGTATGTTGGATGGTGACAGGGGAAAGACAAGCTGCAAGAATAAGGGGTTTGTACTTGAAGACTATTCTAAGACAAGATATTGCTTTCTTTGATAAAGAGACAAACACTGGTGAGGTCATAGGTAGAATGTCAGGTGACACAGTCCTTATTCAAGATGCCATGGGTGAGAAGGTTGGGAAATTTGTGCAGTTAATTGCAACATTTGTTGGAGGGTATGTGATATCATTTGTTAGAGGGTGGCTTCTAACTCTTGTCTTGTTGTCTGCTCTTCCAATTCTCGCTATAGCTGGCGCAGCTTTGGCCATCACGATAGAAAAGATGGCAACCATAGGTCAAAATGCTTATGCAAAAGCAGCACACGTAGTTGAACAGACAATAGGTTCTATAAGAACAGTTGCATCCTTCACTGGGGAAAAGAAAGCAGTATCTAGTTATGAAAAACGTCTTGAAGATGCATACAAATCAGGAGTTAGTGAAGGCATAGCAGCTGGAATGGGTTTTGGTGTTGTTACCTGTGTCATTTTTTGCGGTTATGCTTTAGCTGTATGGTATGGTTCAAAGATGATAATGGAAAAAGGATATAATGGGGGTATGGTGATCAATGTCATGGTTGCTGCATTAAGTGCTTCCATGTCTCTTGGGGAAGCAAGTCCTTGCTTAAGTGCTTTTGCTTCGGGTAAAGCAGCAGCCTATAAAATGTTTCAAACAATTGAGAGAAAGCCTGAGATTGATGCTTATGATCCTACTGGAAAAACATTGGAAGATATTCATGGCGATATAGAATTGAGGGATGTCTATTTCAGTTATCCGGCCAGACCCGAGGAGCTGATATTCAACGGATTCTCTCTGCATATTCCGAGTGGCACAACTGCGGCTTTAGTAGGACAAAGTGGAAGTGGGAAGTCCACAGTTATCAGTTTGATAGAAAGATTCTATGATCCACAGGCAGGTGAAGTTCTTATTGATGGCATTAACATTAGAGAATTTCAGGTTAGATGGATCAGAGGAAAAGTTGGCCTTGTCAGCCAGGAGCCAGTGTTGTTTGCATCTAGCATCAAGGATAACATTGCTTATGGAAAGGAGGGAGCAACAATTGAAGAGATTAAAGTTGCCACTGAACTTGCAAATGCTGCTAATTTCATTGATAAACTGCCAAAGGGATTGGAAACAATGGTTGGTGAGCATGGAACACAACTATCTGGTGGACAGAAGCAACGCATTGCCATTGCAAGAGCTATCCTAAAAGATCCAAGGATTTTGCTTCTAGATGAAGCCACAAGTGCACTTGATGCAGAATCTGAAAGAATAGTGCAAGAGGCCCTAGACAGGATCATGATCAACAGAACTACTGTTATTGTAGCTCATCGCCTAAGCACCGTGAGGAATGCAGACATGATTGCTGTAATTCATAGAGGGAAAATGGTTGAAAAAGGAACACATGTTGAATTAGTCAAGGACCCCGAAGGAGCTTACTCTCAGCTTATACGTTTACAAGAGGTAAGAGAGGAGGATTCATTAAAGAATGCAGACAATCAAAACAAGTCTGAACTCTCAAAAAGTAAAAGGTGGTCATTTCAAAGATCAGAATCATCTATTGGTAGCAGTAGCCGCCACTCGACTTCCTTCGGCATACCTACAGGAGCTAATATCCTTGATCCTAAAGTTGAAACTCCAAGAGAAGAGGATGTACCATCACAAGAGGTTCCACTATGGTGGCTTTTTTCCCTTAACAAACCAGAGATTCCAGTGCTTCTTATGGGATCTATAGCTGCCACAGCAAATGGTGCTATATGGCCAGTGTTTGGTTTGTTGCTTTCTAGTGCCATCAAAACATTTTATGAACCATTCAATGAGTTAAAAAAGGACTCAAGGTTTTGGGCACTAATGTTTGTGACCCTTGGACTTGCATCTTTAATTGCTCTTATAGCAAGAGGATACTTTTTCTCTGTGGCTGGCCATAAGCTAATCCAGCGCATTAGATTGCTATGTTTTGAGAAGGTGATCAACATGGAGGTTTCATGGTTTGATGAGGCTGATCATTCGAGTGGTGCAATCGGTTCAAGGCTCTCGACGGATGCTACATCTGTTCGTGCCCTTGTTGGGGATGCATTAGGACTACTAGTTCAAAATATTGCAACAGCATGTACAGGCTTGATCATTGCTTTCATTGCAAGCTGGCAATTGGCGTTGATCATTGTTGTCATAGCCCCTCTTGTTGGATTGAATGGATATGTTCAAATGAAGTTCTTGAAAGGCTTCAGTTCAGATGCAAAGCGGATGTATGAGGAAGCGAGCCAGGTTGCTAACGATGCAGTTGGAAGCATAAGAACAGTGGCATCTTTCTGCGCTGAAGAGAAAGTTATGGAATTCTATAAGAAGAAATGTGAAGGTCCAAGGAAAACAGGAATAAGGCAAGGCTTGATCAGTGGAATAGGATTCGGGGTTTCATTTTTTCTTCTCTATTGTGTCTATGCAACCTGTTTCTATGCTGGAGCTAGATTTGTGAAGGATGGCAAGGCATCATTCTCAGATGTTTTAAGGGTTTTCTTTGCTTTAACTATGGCAGCTAACGCAATTTCCCAATCAAGCTCACTTGCACCTGATTCTAGCAAAGCCAAGTCAGCTGCTGCTTCCATATTTGGACTTCTTGATATGAAGTCAAAGATAGATCCAAGTGATGAGTCTGGGACAACACTGGATAATGTAAATGGTGAAATTAAGTTTCGCCATGTAGGCTTTAAGTATCCATCTAGACCGGATATACAGATTTTTCGAGACCTAAGTTTGACCATCCATTCTGGCAAAACAGTGGCCCTTGTTGGTGAGAGTGGAAGCGGGAAATCCACAGTGATTGCTTTGTTACAAAGATTCTATGATCCAGATTTTGGTCAAATCACACTTGATGGGATAGAAATTCAGAAATTGCAGCTCAAGTGGTTGAGGCAGCAGATAGGGCTTGTAGGTCAAGAGCCAGTATTATTCAATGACACCATTCGTGCCAACATTGCATATGGTAAAGGAGGCAATGCAACTGAAGCAGAAATCATACAAGTAGCAGAACTGGCCAATGCTCATGGCTTTATTAGTGCCTTACAACAGGGTTATGATACTGTGGTGGGAGAGAGGGGAATACAGTTATCTGGTGGGCAGAAGCAACGTGTAGCCATTGCACGTGCTATAATAAAGAGTCCAAAGATATTGCTACTTGATGAGGCCACAAGTGCATTGGATGCAGAGTCGGAGAGAGTTGTTCAAGATGCATTAGACAAAGTGATTGTGAATAGAAGCACTGTGGTTGTGGCACATCGTCTATCCACAGTTAAAAATGCAGATGTCATTGCTGTAGTTAAAGATGGAGTTATTGTGGAAAAAGGAAGGCATGAGACCCTCATTAGCATGGAGGATGGTTTTTATGCTTCCTTGGTCCAACTTCATTATAGTGCGTCAACAGCATGA 3765 0.4197 MGRENGYKRDDETSSSENQKETVPYFKLFSFADSTDILLMIVGTIAAIGNGMGMPLMTLIFGQMANVFADNLYSEDIVNQVSKISLKFVYLAIGIGVAAFLQVVCWMVTGERQAARIRGLYLKTILRQDIAFFDKETNTGEVIGRMSGDTVLIQDAMGEKVGKFVQLIATFVGGYVISFVRGWLLTLVLLSALPILAIAGAALAITIEKMATIGQNAYAKAAHVVEQTIGSIRTVASFTGEKKAVSSYEKRLEDAYKSGVSEGIAAGMGFGVVTCVIFCGYALAVWYGSKMIMEKGYNGGMVINVMVAALSASMSLGEASPCLSAFASGKAAAYKMFQTIERKPEIDAYDPTGKTLEDIHGDIELRDVYFSYPARPEELIFNGFSLHIPSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLIDGINIREFQVRWIRGKVGLVSQEPVLFASSIKDNIAYGKEGATIEEIKVATELANAANFIDKLPKGLETMVGEHGTQLSGGQKQRIAIARAILKDPRILLLDEATSALDAESERIVQEALDRIMINRTTVIVAHRLSTVRNADMIAVIHRGKMVEKGTHVELVKDPEGAYSQLIRLQEVREEDSLKNADNQNKSELSKSKRWSFQRSESSIGSSSRHSTSFGIPTGANILDPKVETPREEDVPSQEVPLWWLFSLNKPEIPVLLMGSIAATANGAIWPVFGLLLSSAIKTFYEPFNELKKDSRFWALMFVTLGLASLIALIARGYFFSVAGHKLIQRIRLLCFEKVINMEVSWFDEADHSSGAIGSRLSTDATSVRALVGDALGLLVQNIATACTGLIIAFIASWQLALIIVVIAPLVGLNGYVQMKFLKGFSSDAKRMYEEASQVANDAVGSIRTVASFCAEEKVMEFYKKKCEGPRKTGIRQGLISGIGFGVSFFLLYCVYATCFYAGARFVKDGKASFSDVLRVFFALTMAANAISQSSSLAPDSSKAKSAAASIFGLLDMKSKIDPSDESGTTLDNVNGEIKFRHVGFKYPSRPDIQIFRDLSLTIHSGKTVALVGESGSGKSTVIALLQRFYDPDFGQITLDGIEIQKLQLKWLRQQIGLVGQEPVLFNDTIRANIAYGKGGNATEAEIIQVAELANAHGFISALQQGYDTVVGERGIQLSGGQKQRVAIARAIIKSPKILLLDEATSALDAESERVVQDALDKVIVNRSTVVVAHRLSTVKNADVIAVVKDGVIVEKGRHETLISMEDGFYASLVQLHYSASTA 1254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g00545 1254 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 41 328 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Adu06g00545 1254 Pfam ABC transporter 1028 1177 IPR003439 GO:0005524
Adu06g00545 1254 Pfam ABC transporter 382 530 IPR003439 GO:0005524
Adu06g00545 1254 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1009 1246 IPR003439 GO:0005524
Adu06g00545 1254 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 354 601 IPR027417 -
Adu06g00545 1254 PANTHER - 11 1250 - -
Adu06g00545 1254 SMART AAA_5 1036 1229 IPR003593 -
Adu06g00545 1254 SMART AAA_5 390 582 IPR003593 -
Adu06g00545 1254 SUPERFAMILY ABC transporter transmembrane region 27 347 IPR036640 GO:0005524|GO:0016021
Adu06g00545 1254 ProSitePatterns ABC transporters family signature. 502 516 IPR017871 GO:0005524
Adu06g00545 1254 MobiDBLite consensus disorder prediction 631 649 - -
Adu06g00545 1254 MobiDBLite consensus disorder prediction 631 651 - -
Adu06g00545 1254 Gene3D - 999 1253 IPR027417 -
Adu06g00545 1254 Gene3D - 361 619 IPR027417 -
Adu06g00545 1254 CDD ABC_6TM_Pgp_ABCB1_D2_like 677 992 - -
Adu06g00545 1254 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 363 599 IPR003439 GO:0005524
Adu06g00545 1254 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 688 974 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Adu06g00545 1254 Pfam ABC transporter transmembrane region 40 313 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Adu06g00545 1254 Pfam ABC transporter transmembrane region 688 957 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Adu06g00545 1254 ProSitePatterns ABC transporters family signature. 1149 1163 IPR017871 GO:0005524
Adu06g00545 1254 Gene3D ABC transporter type 1, transmembrane domain 86 983 IPR036640 GO:0005524|GO:0016021
Adu06g00545 1254 CDD ABC_MTABC3_MDL1_MDL2 363 601 - -
Adu06g00545 1254 CDD ABC_MTABC3_MDL1_MDL2 1009 1247 - -
Adu06g00545 1254 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 999 1247 IPR027417 -
Adu06g00545 1254 CDD ABC_6TM_Pgp_ABCB1_D1_like 40 336 - -
Adu06g00545 1254 SUPERFAMILY ABC transporter transmembrane region 674 993 IPR036640 GO:0005524|GO:0016021
Adu06g00545 1254 PANTHER ATP-DEPENDENT PERMEASE MDL1, MITOCHONDRIAL 11 1250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g00545 Adu-Chr6 6526105 6530855 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g00545 23 1248 Calmodulin-binding Proteins AT2G36910 44.203 0.0 1045
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g00545 K05658 - gmx:100800034 1912.12