Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g00539 ATGGATAACCCACACCCCCGTGAATTGACTTTCTTACCCTCTAGGGACGTCAAAGAAGTGGATTTCTTCTCATCATCATCATCAACTGCTGCCGATCAAGATCATACTACTCATCATCATGCTTCATCCTTCCCTCATCACCCTGTAAACACTGGGCTGAACTTAACGTGTGAAACTACTGGAATTTCAACTTCAAAGGGATCACCTAATGCCGATAATACTGAATCCGAGAGGAAAATGGTGGAAGGTGAATTACGGAGACTGCAAGAAGAGAATCGAAAGCTGAGAAGTATGGTGGATCAGATCGCCAAAAGCTATAGCCAACTTCAGGCACAGCTCTTCATGGCTTTGCAGAAACAAAAGCTTACTCATCATCATCAGAATACTGGTGTTAAGAGCAATGGGATGATAAGTGGAGAAAAAGCTGTGGAGGGAGATGGAAGGGCGAAAGTAGAGATGAAGAATAACGATGCTTCGGTATCCGGTGATGAAAAGAGAGAAAGAGAGGTATCAGCATCAAACAATAATGGTAATAATGCAGAGGAGGTAATGTCAAAGAAGCATGATGAGAATGATGATGATAACGAAGGTGATGAAGATGGTTTGACTAAGCTTCATTTGGGAAAACAAGTAGCAGCATCTGCTACAGAAGAAGACGTCCTTGAGCGATCTTCTTCTCAGAGTTGGGGATCATGCAAGACTCCCAACTTAGAAGAACCCAAGCTTCCTTCTTCTGACCTTCCTTTCAGGAAAGCCAGGGTTTCAGTTCGCGCAAGATCAGAAGCTCCTCTGATTAGCGATGGATGCCAGTGGAGGAAATACGGACAAAAAATGGCTAAGGGTAACCCCAGTCCTCGAGCCTACTATCGGTGCACCATGGCTGCTGGATGCCCAGTTCGGAAGCAGGTTCAAAGATGCGCAGAGGACAGTACAGTCCTAATAACAACCTATGAAGGTAACCACAACCACCCTCTTCCGCCGGCAGCCACCGCCATGGCCAACACGACTTCAGCCGCAGCAGCCATGCTACTATCAGGATCAACCTCATCATCGTCCAAAGAAACCCTAGCAACTTCAGCAGCAGGAGGATACTTCTCTTCATCAATGCCCTACACATCAATGGCGACGCTATCAGCTTCCGCGCCATTTCCCACCATCACTCTCGACCTCACACACAACCACCACAACGCACTCCAACTCCACCGTGTGGTCCCTCCTCCCGGTGTTACCTTCCCTCTCCCATTGCATGCAGTGACTCCTCCACATCAGCTTATAGCAGGGCACCCGTTCTTAATCTCTCACCACCAGAAGCTGATGCCTCCTTTGGTTCATCGACAACAACCACAGGCTTCCAATAATTCGCCGTCTATGGTGGAGACAGTGAGTGCAGCCATTGCTTTGGATCCAAACTTCACTGCGGCCGTGGCTGCGGCACTCTCATCAATCATTGGAAGCAGTAACAATGGTGGAAGTGCTATTTCTGTGTCACCGAATGGGTCACCGCAACTTCCTCAGTCATGTACTACCTACTCTACCAACTAG 1542 0.4792 MDNPHPRELTFLPSRDVKEVDFFSSSSSTAADQDHTTHHHASSFPHHPVNTGLNLTCETTGISTSKGSPNADNTESERKMVEGELRRLQEENRKLRSMVDQIAKSYSQLQAQLFMALQKQKLTHHHQNTGVKSNGMISGEKAVEGDGRAKVEMKNNDASVSGDEKREREVSASNNNGNNAEEVMSKKHDENDDDNEGDEDGLTKLHLGKQVAASATEEDVLERSSSQSWGSCKTPNLEEPKLPSSDLPFRKARVSVRARSEAPLISDGCQWRKYGQKMAKGNPSPRAYYRCTMAAGCPVRKQVQRCAEDSTVLITTYEGNHNHPLPPAATAMANTTSAAAAMLLSGSTSSSSKETLATSAAGGYFSSSMPYTSMATLSASAPFPTITLDLTHNHHNALQLHRVVPPPGVTFPLPLHAVTPPHQLIAGHPFLISHHQKLMPPLVHRQQPQASNNSPSMVETVSAAIALDPNFTAAVAAALSSIIGSSNNGGSAISVSPNGSPQLPQSCTTYSTN 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g00539 513 MobiDBLite consensus disorder prediction 219 234 - -
Adu06g00539 513 MobiDBLite consensus disorder prediction 493 513 - -
Adu06g00539 513 Coils Coil 71 105 - -
Adu06g00539 513 ProSiteProfiles WRKY domain profile. 260 326 IPR003657 GO:0003700|GO:0006355|GO:0043565
Adu06g00539 513 Pfam WRKY DNA -binding domain 267 324 IPR003657 GO:0003700|GO:0006355|GO:0043565
Adu06g00539 513 SMART WRKY_cls 265 325 IPR003657 GO:0003700|GO:0006355|GO:0043565
Adu06g00539 513 Gene3D WRKY domain 250 327 IPR036576 GO:0003700|GO:0006355|GO:0043565
Adu06g00539 513 SUPERFAMILY WRKY DNA-binding domain 258 326 IPR036576 GO:0003700|GO:0006355|GO:0043565
Adu06g00539 513 MobiDBLite consensus disorder prediction 144 171 - -
Adu06g00539 513 MobiDBLite consensus disorder prediction 23 52 - -
Adu06g00539 513 PANTHER WRKY TRANSCRIPTION FACTOR 47-RELATED 14 512 - -
Adu06g00539 513 MobiDBLite consensus disorder prediction 144 245 - -
Adu06g00539 513 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 14 512 IPR044810 GO:0003700
Adu06g00539 513 MobiDBLite consensus disorder prediction 59 78 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g00539 Adu-Chr6 6482244 6485270 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g00539 74 483 WRKY Transcription Factor Family AT4G04450 39.720 1.39e-78 251
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Adu06g00539 WRKY 7.7e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g00539 - - gmx:100783661 449.899