Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Adu06g00539 | ATGGATAACCCACACCCCCGTGAATTGACTTTCTTACCCTCTAGGGACGTCAAAGAAGTGGATTTCTTCTCATCATCATCATCAACTGCTGCCGATCAAGATCATACTACTCATCATCATGCTTCATCCTTCCCTCATCACCCTGTAAACACTGGGCTGAACTTAACGTGTGAAACTACTGGAATTTCAACTTCAAAGGGATCACCTAATGCCGATAATACTGAATCCGAGAGGAAAATGGTGGAAGGTGAATTACGGAGACTGCAAGAAGAGAATCGAAAGCTGAGAAGTATGGTGGATCAGATCGCCAAAAGCTATAGCCAACTTCAGGCACAGCTCTTCATGGCTTTGCAGAAACAAAAGCTTACTCATCATCATCAGAATACTGGTGTTAAGAGCAATGGGATGATAAGTGGAGAAAAAGCTGTGGAGGGAGATGGAAGGGCGAAAGTAGAGATGAAGAATAACGATGCTTCGGTATCCGGTGATGAAAAGAGAGAAAGAGAGGTATCAGCATCAAACAATAATGGTAATAATGCAGAGGAGGTAATGTCAAAGAAGCATGATGAGAATGATGATGATAACGAAGGTGATGAAGATGGTTTGACTAAGCTTCATTTGGGAAAACAAGTAGCAGCATCTGCTACAGAAGAAGACGTCCTTGAGCGATCTTCTTCTCAGAGTTGGGGATCATGCAAGACTCCCAACTTAGAAGAACCCAAGCTTCCTTCTTCTGACCTTCCTTTCAGGAAAGCCAGGGTTTCAGTTCGCGCAAGATCAGAAGCTCCTCTGATTAGCGATGGATGCCAGTGGAGGAAATACGGACAAAAAATGGCTAAGGGTAACCCCAGTCCTCGAGCCTACTATCGGTGCACCATGGCTGCTGGATGCCCAGTTCGGAAGCAGGTTCAAAGATGCGCAGAGGACAGTACAGTCCTAATAACAACCTATGAAGGTAACCACAACCACCCTCTTCCGCCGGCAGCCACCGCCATGGCCAACACGACTTCAGCCGCAGCAGCCATGCTACTATCAGGATCAACCTCATCATCGTCCAAAGAAACCCTAGCAACTTCAGCAGCAGGAGGATACTTCTCTTCATCAATGCCCTACACATCAATGGCGACGCTATCAGCTTCCGCGCCATTTCCCACCATCACTCTCGACCTCACACACAACCACCACAACGCACTCCAACTCCACCGTGTGGTCCCTCCTCCCGGTGTTACCTTCCCTCTCCCATTGCATGCAGTGACTCCTCCACATCAGCTTATAGCAGGGCACCCGTTCTTAATCTCTCACCACCAGAAGCTGATGCCTCCTTTGGTTCATCGACAACAACCACAGGCTTCCAATAATTCGCCGTCTATGGTGGAGACAGTGAGTGCAGCCATTGCTTTGGATCCAAACTTCACTGCGGCCGTGGCTGCGGCACTCTCATCAATCATTGGAAGCAGTAACAATGGTGGAAGTGCTATTTCTGTGTCACCGAATGGGTCACCGCAACTTCCTCAGTCATGTACTACCTACTCTACCAACTAG | 1542 | 0.4792 | MDNPHPRELTFLPSRDVKEVDFFSSSSSTAADQDHTTHHHASSFPHHPVNTGLNLTCETTGISTSKGSPNADNTESERKMVEGELRRLQEENRKLRSMVDQIAKSYSQLQAQLFMALQKQKLTHHHQNTGVKSNGMISGEKAVEGDGRAKVEMKNNDASVSGDEKREREVSASNNNGNNAEEVMSKKHDENDDDNEGDEDGLTKLHLGKQVAASATEEDVLERSSSQSWGSCKTPNLEEPKLPSSDLPFRKARVSVRARSEAPLISDGCQWRKYGQKMAKGNPSPRAYYRCTMAAGCPVRKQVQRCAEDSTVLITTYEGNHNHPLPPAATAMANTTSAAAAMLLSGSTSSSSKETLATSAAGGYFSSSMPYTSMATLSASAPFPTITLDLTHNHHNALQLHRVVPPPGVTFPLPLHAVTPPHQLIAGHPFLISHHQKLMPPLVHRQQPQASNNSPSMVETVSAAIALDPNFTAAVAAALSSIIGSSNNGGSAISVSPNGSPQLPQSCTTYSTN | 513 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Adu06g00539 | 513 | MobiDBLite | consensus disorder prediction | 219 | 234 | - | - | |
Adu06g00539 | 513 | MobiDBLite | consensus disorder prediction | 493 | 513 | - | - | |
Adu06g00539 | 513 | Coils | Coil | 71 | 105 | - | - | |
Adu06g00539 | 513 | ProSiteProfiles | WRKY domain profile. | 260 | 326 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Adu06g00539 | 513 | Pfam | WRKY DNA -binding domain | 267 | 324 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Adu06g00539 | 513 | SMART | WRKY_cls | 265 | 325 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Adu06g00539 | 513 | Gene3D | WRKY domain | 250 | 327 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Adu06g00539 | 513 | SUPERFAMILY | WRKY DNA-binding domain | 258 | 326 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Adu06g00539 | 513 | MobiDBLite | consensus disorder prediction | 144 | 171 | - | - | |
Adu06g00539 | 513 | MobiDBLite | consensus disorder prediction | 23 | 52 | - | - | |
Adu06g00539 | 513 | PANTHER | WRKY TRANSCRIPTION FACTOR 47-RELATED | 14 | 512 | - | - | |
Adu06g00539 | 513 | MobiDBLite | consensus disorder prediction | 144 | 245 | - | - | |
Adu06g00539 | 513 | PANTHER | WRKY TRANSCRIPTION FACTOR 36-RELATED | 14 | 512 | IPR044810 | GO:0003700 | |
Adu06g00539 | 513 | MobiDBLite | consensus disorder prediction | 59 | 78 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Adu06g00539 | Adu-Chr6 | 6482244 | 6485270 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Adu06g00539 | 74 | 483 | WRKY Transcription Factor Family | AT4G04450 | 39.720 | 1.39e-78 | 251 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Adu06g00539 | WRKY | 7.7e-25 | CL0274 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Adu06g00539 | - | - | gmx:100783661 | 449.899 |