Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Adu06g00537 | ATGGGAAGAAAAGCTGCTACTACTTGTTCCTCTTCCTCTAACATTTCTTCAACTGCTTCCTTGAATCTGAGGCTTGCACTCAGCACTCATGAAGAATGTGGTGGAAGCCTCTTTGTGAAGGTGTACATGGAAGGCATTCCAATAGGGAGGAAGCTCAACATATTAGCACATAGAAGCTACCATGAGCTTGTTAAGAGACTTGAGAACATGTTCGACACTACCATTCTCTGGGGTACAGAGATGGATGAAGTTGTAGTTCAACCTGGTGAGAGATGCCATGTCCTCACTTATGAAGATGAAGAAGGAGATCTTGTTATGGTTGGGGATGTTCCTTGGGAGATGTTTGTTTCCACTGTAAAGAGGTTGAAGATCACAAGGGTAGACACATTCACTACCTCTTGA | 402 | 0.4353 | MGRKAATTCSSSSNISSTASLNLRLALSTHEECGGSLFVKVYMEGIPIGRKLNILAHRSYHELVKRLENMFDTTILWGTEMDEVVVQPGERCHVLTYEDEEGDLVMVGDVPWEMFVSTVKRLKITRVDTFTTS | 133 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Adu06g00537 | 133 | ProSiteProfiles | PB1 domain profile. | 36 | 129 | IPR000270 | GO:0005515 | |
Adu06g00537 | 133 | Pfam | AUX/IAA family | 29 | 126 | IPR033389 | - | |
Adu06g00537 | 133 | PANTHER | AUXIN-RESPONSIVE PROTEIN IAA17 | 35 | 130 | IPR003311 | GO:0005634|GO:0006355 | |
Adu06g00537 | 133 | Gene3D | - | 31 | 133 | - | - | |
Adu06g00537 | 133 | PANTHER | AUXIN-INDUCED PROTEIN | 35 | 130 | - | - | |
Adu06g00537 | 133 | SUPERFAMILY | CAD & PB1 domains | 31 | 125 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Adu06g00537 | Adu-Chr6 | 6461811 | 6462537 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Adu06g00537 | 39 | 128 | B3 DNA Binding Superfamily | AT2G46530 | 35.556 | 3.46e-12 | 60.5 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | AUX or IAA | Adu06g00537 | AUX_IAA | 7.4e-31 | CL0072 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Adu06g00537 | K14484 | - | gmx:100818376 | 162.54 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Adu06g00537 | 06 | 6461811 | 6462537 | Adu09g01045 | 09 | 19629391 | 19630899 | PCT |