Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g00531 ATGGGAAGACACTCTTGCTGTTACAAGCAGAAGCTTCGGAAGGGTCTATGGTCTCCTGAAGAGGATGAAAAGCTTCTCAGGCATATCACTAAGTACGGTCATGGATGTTGGAGCTCTGTTCCTAAGCAAGCAGGTTTGCAGAGGTGTGGTAAGAGTTGCAGGCTTAGGTGGATTAATTACTTAAGGCCTGATTTAAAGAGAGGTACATTTTCTCAGGAGGAAGAAAATCTCATCATTGAACTTCATGCTGTGTTAGGGAATAGATGGTCTCAGATTGCGGCGCAGCTTCCGGGGAGGACAGACAATGAAATCAAGAATCTGTGGAATTCATGCTTGAAGAAGAAGCTGAGGCAAAGAGGCATAGACCCTGTTACACACAAGCCATTATCTGAGATAGAGAATGGATTGTCAGAGGAGAAAGAGAAAGCATTGTCCAATGATAATGAATTGAACTTGTTGAGATCAGAGAGTTCCAATAAGTCTGATGGAGCTTCTTCCTATGATCATCAACAACAACAACAACAACAAGGATTTGTTCCAACAACAACAGAGATGGAAGGTTCTTCTTCCACTAACAAGGACATGTTCCTTGACACTACAAGGTTCATGGCTAACACTTGCTCAGATTTTATGGGGAACTACAACATGAGTTATGCATCATCATCTTCCAATGTCACTGTCACCGACAACAACAATTGGTTCACACAAACATCAAGGCCTTCTTTTGATATCAACTCAGATTTCCTACCTGCTTCCTTTTGCTACAAGCCAGAATCTCTCAAGAACACCAACATGCTTTCTTCTTCTTCTTCTTCATGGGGATTGATCACAGATTGCAGCATGGAAGAAGCAGAAGAGGCAAAGTGGTCTGACTATCTTCACAATCAAATGTTGATGCTTGCAGCTGTTCAGAACAACAACAACAACAACAACCAAGCTTCTTTATGCAATGAGATAAAGCCTCTTCCTTCAACCACCACAGTAACAACACCACCACCACCACATTTGGTTCCTGATACTTTAGGAGCTATTATCATGTTACCTCATTCCAAGAATCAACATCACCATACATCACAAACTTCTTCTACCACCACCTTTTCCAAGGATATCCAGAACCTAACAGCAGCCTTTGGACATATATAA 1143 0.4182 MGRHSCCYKQKLRKGLWSPEEDEKLLRHITKYGHGCWSSVPKQAGLQRCGKSCRLRWINYLRPDLKRGTFSQEEENLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCLKKKLRQRGIDPVTHKPLSEIENGLSEEKEKALSNDNELNLLRSESSNKSDGASSYDHQQQQQQQGFVPTTTEMEGSSSTNKDMFLDTTRFMANTCSDFMGNYNMSYASSSSNVTVTDNNNWFTQTSRPSFDINSDFLPASFCYKPESLKNTNMLSSSSSSWGLITDCSMEEAEEAKWSDYLHNQMLMLAAVQNNNNNNNQASLCNEIKPLPSTTTVTTPPPPHLVPDTLGAIIMLPHSKNQHHHTSQTSSTTTFSKDIQNLTAAFGHI 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g00531 380 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Adu06g00531 380 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Adu06g00531 380 PANTHER MYB DOMAIN PROTEIN 55 1 322 - -
Adu06g00531 380 MobiDBLite consensus disorder prediction 156 194 - -
Adu06g00531 380 SUPERFAMILY Homeodomain-like 12 108 IPR009057 -
Adu06g00531 380 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Adu06g00531 380 CDD SANT 17 61 IPR001005 -
Adu06g00531 380 SMART sant 13 63 IPR001005 -
Adu06g00531 380 SMART sant 66 114 IPR001005 -
Adu06g00531 380 Gene3D - 11 67 - -
Adu06g00531 380 Gene3D - 68 143 - -
Adu06g00531 380 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Adu06g00531 380 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Adu06g00531 380 PANTHER MYB DOMAIN PROTEIN 55 1 322 - -
Adu06g00531 380 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Adu06g00531 380 CDD SANT 69 109 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g00531 Adu-Chr6 6380449 6382214 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g00531 1 157 MYB Transcription Factor Family AT4G01680 83.439 6.49e-95 281
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Adu06g00531 Myb_DNA-binding 1.7e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g00531 K09422 - gmx:100819449 391.349
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu06g00531 06 6380449 6382214 Adu09g01056 09 19880959 19883023 PCT