Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g00527 ATGGCTTCTTCATTTTCAATGCAGTTGACCCATACCCACAACCGTCTTCCATGGTTTCGCCATATCCAGGGTAATTATAGCCAAGATGTGGCTAAGGTTCTTAGGCCTAGTATGGTAGGTAGCAGTAGCGGATTACAGCTTGGTCATAGCAAAGGATTGGCATCAAGATCACATTATGCCCTAAGGTTTTCTGTTTTGCAACAATCCGATCCAAAATCGATCAGATATAGGACCATGGTCTGTGTCAATGCTACAGAAAACAATGTTGTAGAGCTGCAAGCCAAAGTGACAAACAAGTGCTACTTTGATGTAGAAGTTGGGGGTGAACCTGTCGGCAGGATTGTTTTGGGCCTATTTGGAGAGATCGCTCCTAAAACAGTTGAGAACTTCCGTGCTTTGTGCACAGGAGAGAAAGGATATGGCTACAAAGGATGCTCCTTCCATCGTATAATCAAAGAATTCATGATTCAAGGAGGGGATTTTACTGAAGGAGATGGAACTGGTGGAATTAGCATCTATGGTCCCAGTTTTAAAGATGAGAGTTTTGCCTTGAAGCATGTTGGTCCTGGGGTTTTGAGCATGGCAAATGCTGGTCCTAACACCAATAGTAGTCAATTTTTTATCTGCACGGTAAAGACTCCTTGGCTAGACAATCGTCACGTGGTGTTTGGACACGTCATTGATGGAATGGATGTTGTGAAGACACTTGAATCCCAAGAGACAAGCAGAATGGATATCCCTCGGAAGCCTTGCAGAATTGTTAACTGCGGTGAGCTTCCTTTAGATAGTTGA 792 0.4369 MASSFSMQLTHTHNRLPWFRHIQGNYSQDVAKVLRPSMVGSSSGLQLGHSKGLASRSHYALRFSVLQQSDPKSIRYRTMVCVNATENNVVELQAKVTNKCYFDVEVGGEPVGRIVLGLFGEIAPKTVENFRALCTGEKGYGYKGCSFHRIIKEFMIQGGDFTEGDGTGGISIYGPSFKDESFALKHVGPGVLSMANAGPNTNSSQFFICTVKTPWLDNRHVVFGHVIDGMDVVKTLESQETSRMDIPRKPCRIVNCGELPLDS 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g00527 263 Gene3D - 84 262 IPR029000 -
Adu06g00527 263 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 102 257 IPR002130 GO:0000413|GO:0003755
Adu06g00527 263 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 54 263 - -
Adu06g00527 263 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 118 133 IPR002130 GO:0000413|GO:0003755
Adu06g00527 263 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 147 159 IPR002130 GO:0000413|GO:0003755
Adu06g00527 263 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 190 205 IPR002130 GO:0000413|GO:0003755
Adu06g00527 263 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 205 217 IPR002130 GO:0000413|GO:0003755
Adu06g00527 263 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 218 233 IPR002130 GO:0000413|GO:0003755
Adu06g00527 263 SUPERFAMILY Cyclophilin-like 94 259 IPR029000 -
Adu06g00527 263 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 142 159 IPR020892 GO:0003755|GO:0006457
Adu06g00527 263 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 101 258 IPR002130 GO:0000413|GO:0003755
Adu06g00527 263 CDD cyclophilin_ABH_like 99 257 - -
Adu06g00527 263 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP20-3, CHLOROPLASTIC 54 263 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g00527 Adu-Chr6 6329284 6331990 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g00527 49 256 U-box Gene Family AT5G67530 37.799 4.35e-31 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g00527 K03768 - gmx:100785805 409.453