Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g00523 ATGACGACTTCTATACTCTCCGCGACGTCCTCAACAAGCGCATCCAAGACAATTATTTCAACACAAAATCCACTTTCGACTTCGTCACCGACTGAAGCAACGTCCGAAGCGAATTCACGCATCCAAGACAATCCTCATGAATCCGTCGGGGAACAACAATCGGCGACTGACAATGGCGCCGGCTATAACCAGACGGGAACAGTCAACAAGGGCGAAGCTGATGGCAAGATGGCACGGCAGATGCAGCAAAGAGGGGATATTCGTGCGGCGCAGATGATGAGGATGAAGGATCTTTGGTTGAACCGCGATAAGCGAATCGTCGGAGCGATTCCCGGTGTGTATGTTGGCGACGTGTTCCTCTTTCGGATGGAATTGTGTTTCCTTGGATTGCACGGTCAGATCCAGGCTGACATTGATTACCTGACAGCTTCCATGAGCGTCAACAATGAGCCAATTGTAACGAGTGTTATTGTCTCCGGTAGCTACGAGAATGATATGGATGAAAGAGATAAAGCTCATGCAACTTTCTACGATGGAGCCGATGCCTCAGGAACAATGGGTGGTGCATGTGGCTATGGGAATCTGTACACAGACGGTTACGGTACGAAGACGGCGGCTCTGAGCACCGCTCTGTTTAACGACGGGAAGGCATGCGGCGGTTGCTATCAGATAGTTTGCGATGCAAGCCAAGTGCCGCAATGGTGCCTTAAGGGCACTTTCATCACAGTTACTGCCACAAACTTTTGTCCTCCAAACTATGCACTCCCTAATGACAATGGCGGTTGGTGTAATCCTCCAAGACCACACTTCGACATGTCTCAACCTTCCTTTCTAACCATTGCCAAATACAAGGCCGGCATCGTACCCATACTGTACAGAAAAGTTGGGTGTAGAAGGAGTGGAGGAATAAGATTTAGCATCAATGGAAGGGATTATTTCGAATTAGTGACGATAAGCAATGTAGGTGGAGTTGGGGAGATAGGGCAAGTGTGGGTAAAAGGGTCAAAGAAGAATGTGTGGGAAGAAATGAGCAGGAACTGGGGTGTTAACTGGCAAAGTTTAAGCTATCTCAATGGACAGAGCTTGTCCTTCACAGTTCAACTCACCGATGGAAGAACCCTCACTGCTTATAACGTAGCACCCTCCAATTGGAAATTTGGCCAATCTTTCATCTCCAATATTCAGTTCAACTAA 1194 0.4799 MTTSILSATSSTSASKTIISTQNPLSTSSPTEATSEANSRIQDNPHESVGEQQSATDNGAGYNQTGTVNKGEADGKMARQMQQRGDIRAAQMMRMKDLWLNRDKRIVGAIPGVYVGDVFLFRMELCFLGLHGQIQADIDYLTASMSVNNEPIVTSVIVSGSYENDMDERDKAHATFYDGADASGTMGGACGYGNLYTDGYGTKTAALSTALFNDGKACGGCYQIVCDASQVPQWCLKGTFITVTATNFCPPNYALPNDNGGWCNPPRPHFDMSQPSFLTIAKYKAGIVPILYRKVGCRRSGGIRFSINGRDYFELVTISNVGGVGEIGQVWVKGSKKNVWEEMSRNWGVNWQSLSYLNGQSLSFTVQLTDGRTLTAYNVAPSNWKFGQSFISNIQFN 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g00523 397 MobiDBLite consensus disorder prediction 1 84 - -
Adu06g00523 397 SUPERFAMILY PUA domain-like 90 184 IPR015947 -
Adu06g00523 397 SUPERFAMILY Barwin-like endoglucanases 171 320 IPR036908 -
Adu06g00523 397 MobiDBLite consensus disorder prediction 1 70 - -
Adu06g00523 397 Gene3D - 302 397 IPR036749 -
Adu06g00523 397 ProSiteProfiles YDG domain profile. 108 287 IPR003105 -
Adu06g00523 397 SMART dpbb_1 204 292 IPR007112 -
Adu06g00523 397 PRINTS Expansin signature 277 290 IPR002963 GO:0009664
Adu06g00523 397 PRINTS Expansin signature 228 239 IPR002963 GO:0009664
Adu06g00523 397 PRINTS Expansin signature 349 370 IPR002963 GO:0009664
Adu06g00523 397 PRINTS Expansin signature 301 313 IPR002963 GO:0009664
Adu06g00523 397 PRINTS Expansin signature 241 251 IPR002963 GO:0009664
Adu06g00523 397 PRINTS Expansin signature 313 334 IPR002963 GO:0009664
Adu06g00523 397 PRINTS Expansin signature 199 213 IPR002963 GO:0009664
Adu06g00523 397 PRINTS Expansin signature 378 394 IPR002963 GO:0009664
Adu06g00523 397 PRINTS Expansin signature 260 277 IPR002963 GO:0009664
Adu06g00523 397 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 187 302 IPR007112 -
Adu06g00523 397 PRINTS Expansin/Lol pI family signature 168 183 IPR007118 GO:0005576
Adu06g00523 397 PRINTS Expansin/Lol pI family signature 186 204 IPR007118 GO:0005576
Adu06g00523 397 PRINTS Expansin/Lol pI family signature 285 301 IPR007118 GO:0005576
Adu06g00523 397 PRINTS Expansin/Lol pI family signature 340 354 IPR007118 GO:0005576
Adu06g00523 397 PRINTS Expansin/Lol pI family signature 378 392 IPR007118 GO:0005576
Adu06g00523 397 PRINTS Expansin/Lol pI family signature 208 226 IPR007118 GO:0005576
Adu06g00523 397 PANTHER EXPANSIN 167 396 - -
Adu06g00523 397 SUPERFAMILY PHL pollen allergen 299 392 IPR036749 -
Adu06g00523 397 SMART G9a_1 103 230 IPR003105 -
Adu06g00523 397 Pfam Lytic transglycolase 204 292 IPR009009 -
Adu06g00523 397 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 312 392 IPR007117 -
Adu06g00523 397 Pfam Expansin C-terminal domain 303 381 IPR007117 -
Adu06g00523 397 PANTHER EXPANSIN-A15 167 396 IPR002963 GO:0009664
Adu06g00523 397 Pfam SAD/SRA domain 107 180 IPR003105 -
Adu06g00523 397 Gene3D - 156 298 IPR036908 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g00523 Adu-Chr6 6224808 6236093 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g00523 171 396 Expansin Gene Family AT4G01630 79.204 3.40e-139 395
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g00523 - - aip:107648027 462.996
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu06g00523 06 6224808 6236093 Adu06g00523 06 6224808 6236093 ECH
Adu06g00523 06 6224808 6236093 Adu09g01072 09 20355318 20357495 PCT