Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g00502 ATGGACTATCGTTGGACCAATGGCAGACAGGACACTGGCAGTGGCCGAGACAGGAGACAACATAAAAGAGACCAGGCATATCAGGACTCCTTTGTTGAGAATTCGTTGGAGGATTTTCGTTTGCCGATCAACCACAGGCCAACAGAGAATGTTGACCTGGAAAATGTAGAACAAGCATCCCTTGATACGCAGTTAACATCATCTAATATTGGCTTCAAGCTTCTCCAAAAGATGGGTTGGAAAGGAAAAGGTCTTGGGAAGGATGAGCAAGGAATCATTGAGCCAATAAAGTCGGGGATGAGAGATCCAAGACTTGGGGTTGGTAAACAAGAGGAGGATGATTTTTTCACCGCAGAGGAAAATATCCAGCGAAGAAAACTAGATATTGAGTTGGAGGAGACAGAGGAAAATGTGAGAAAGCGGGAGGTGTTAGCAGAACGCGAACAAAAAATTCAAACCGAAGTGAAAGAAATTCGAAAGGTGTTCTATTGTGAACTCTGCAACAAGCAATACAAATTGGCAATGGAATTTGAAGCACACTTGAGCTCTTATGATCACAATCACAGAAAGCGTTTCAAACAAATGAAGGAAATGCATGGTAGTAGTAGCCGAGATGATAGGCAAAAACGAGAACAACAGCGTCAAGAGAAAGAGATGGCGAAGTTTGCTCAAATGGCTGATGCACAAAAGCAACAACGACTTCAACTGCAGCAAGAGTCTGGATCAGCATCAGCTTCGTCTGAATCAAAAACTGCTACTGCACTAACAGATCAAGAGCAGCGGAACACGTTGAAATTTGGGTTTTCTTCTAAAGGCACTGCTTCCAAGGTCTCGGTTGGTATCAAGAAGCCAAATATTGCAAAGAAAAAAAATGTTCCCATTTCATCGATTTTTGGCAATGATTCTGATGAAGAATAG 918 0.4248 MDYRWTNGRQDTGSGRDRRQHKRDQAYQDSFVENSLEDFRLPINHRPTENVDLENVEQASLDTQLTSSNIGFKLLQKMGWKGKGLGKDEQGIIEPIKSGMRDPRLGVGKQEEDDFFTAEENIQRRKLDIELEETEENVRKREVLAEREQKIQTEVKEIRKVFYCELCNKQYKLAMEFEAHLSSYDHNHRKRFKQMKEMHGSSSRDDRQKREQQRQEKEMAKFAQMADAQKQQRLQLQQESGSASASSESKTATALTDQEQRNTLKFGFSSKGTASKVSVGIKKPNIAKKKNVPISSIFGNDSDEE 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g00502 305 PANTHER FINGER DOMAIN PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G04180)-RELATED 1 305 - -
Adu06g00502 305 Coils Coil 117 144 - -
Adu06g00502 305 MobiDBLite consensus disorder prediction 193 305 - -
Adu06g00502 305 ProSitePatterns Zinc finger C2H2 type domain signature. 164 186 IPR013087 -
Adu06g00502 305 SMART G-patch_5 65 110 IPR000467 GO:0003676
Adu06g00502 305 Coils Coil 219 239 - -
Adu06g00502 305 MobiDBLite consensus disorder prediction 193 223 - -
Adu06g00502 305 Pfam Zinc-finger double-stranded RNA-binding 162 189 IPR022755 -
Adu06g00502 305 ProSiteProfiles G-patch domain profile. 67 112 IPR000467 GO:0003676
Adu06g00502 305 SUPERFAMILY beta-beta-alpha zinc fingers 143 197 IPR036236 -
Adu06g00502 305 MobiDBLite consensus disorder prediction 228 276 - -
Adu06g00502 305 Pfam G-patch domain 68 108 IPR000467 GO:0003676
Adu06g00502 305 MobiDBLite consensus disorder prediction 11 28 - -
Adu06g00502 305 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g00502 Adu-Chr6 5918635 5921903 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g00502 13 305 C2H2 Transcription Factor Family AT5G26610 65.552 7.03e-127 362
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g00502 - - gmx:100793206 489.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu06g00502 06 5918635 5921903 Adu06g00502 06 5918635 5921903 ECH