Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g00493 ATGGGCGGAGGTGGACCGAACGCGGAGGCACAGTATTCGACGGCCAAGACCTCCGTGTGGTGGGACATAGAGAACTGCCACGTTCCTAAAGGCTGCGATCCCCACGCCATCGCTCAGAACATCAGCTCTGCACTGGTCCGCATGAATTACTGTGGTCCCGTCTCCGTCTCCGCCTACGGCGACACCACTCGTATCCCCGCCTCTGTACAGCACGCTCTCTCCAGCACCGGCATCTCCCTCAACCATGTCCCCGCTGGCGTTAAAGATGCTAGCGACAAGAAGATTCTTGTTGACATGCTGTTTTGGGCAGTGGACAATCCCGCACCTGCTAATTATTTATTAATTTCTGGCGACAGAGACTTCTCTAATGCTCTCCATCAACTGCGGATGAGAAGATATAATATTCTTCTTGCGCAACCTCAGAAAGCATCTGCACCACTAGTAGCAGCTGCTAAGAGTGTATGGCTCTGGACTAGTCTTTTAGCTGGAGGGCCTCCTCTAACTAATGGCGAATCACAACAACTTGGTAATAATAGCCTTGTAACAAGTTCCGACACCTTAACAATTCCGGTCACTAGTGTCGCTCAGACACAGCCACAGGCTGATTCCTACACCGAAGTGCATGTAGGAAATCAGAAGTTTCCAAATGGAGGAGGAAGGGGATACGATCCTAGGTATCAGGGGAAAACAAATTGGAGAAACTCGGGTCAGACAAATGGACCCAAGGCCATGAATCCACCGCCAGTTGGGCATCAAGATAGTCGTAATAATATAAACTCTTATCGACCTGGCAACTTCAATCCAAATGTTTCTTCAAGTGGACCTGCTCCAAATTTTATTCGTGGCAATACTGAACAGTTATGGAACAATAGCAATAATATACAGGGAAATCATCAAAATCCTTATTCACAGCCTCCTTTAAGACCAAACAGTTTCCCACTGCAACCTCCTTTTGCATCAAATAATTCTTATCCTCCAAGTACCCATACTTTTGCAAATTCACCAGTGCCACCGAGGACTGGTGTCCCCAGCTTCACTGCAGTTCCACCACCAAATGTGCCTGAAATTGGCAATCTGAACATTTCTGGATATCCCAATGGTGTTCATAATCCACGTCCTGTTAAGCAACGCAGTGGGGAATTGAAGCAGAATCCTAACAATAATGCTCCACTTCCTGTAACATCAACTGTTGAACAAAATGGACATATGGTACTTAGCAATAGCACGCAACATTTACAAGGCTATTCAAATGGAAATGGTCCAGACCATCAACTTGCATCATCGACGGGTAATAATAACCATTCTGGTAATGGCATGTGGGGATCTCCAGGTTGCCCTAAACCGTCTGAATATGTCCAAGGCCTTATAGGGGTTGTTTTACTAGCCTTGAATTCACTAAAAAATGAGAAGATTATGCCAACAGAGGCAAATATAACTGATTGCATTCGATATGGAGATCCCAGGCACCGCAACACTGATGTTAAGAAAGCTTTGGAGAGTGCTATTGAGCAGCAGATGGTGGTGAAACAGAATTTAGGTGCTTTGCAGCTGTATGTTGGTAAGAATGATAAACTTTGGAAGTGCATAAATCCTATAGCTGGTAATCCTAAGCAGCACTCAAAAGAAACCTGGGATGAAGTTCAAAAGTTTCTGACAACTTCTTCAGGAAGATCAGCATTGATGGGTACTCAGTGCAAGTAA 1701 0.455 MGGGGPNAEAQYSTAKTSVWWDIENCHVPKGCDPHAIAQNISSALVRMNYCGPVSVSAYGDTTRIPASVQHALSSTGISLNHVPAGVKDASDKKILVDMLFWAVDNPAPANYLLISGDRDFSNALHQLRMRRYNILLAQPQKASAPLVAAAKSVWLWTSLLAGGPPLTNGESQQLGNNSLVTSSDTLTIPVTSVAQTQPQADSYTEVHVGNQKFPNGGGRGYDPRYQGKTNWRNSGQTNGPKAMNPPPVGHQDSRNNINSYRPGNFNPNVSSSGPAPNFIRGNTEQLWNNSNNIQGNHQNPYSQPPLRPNSFPLQPPFASNNSYPPSTHTFANSPVPPRTGVPSFTAVPPPNVPEIGNLNISGYPNGVHNPRPVKQRSGELKQNPNNNAPLPVTSTVEQNGHMVLSNSTQHLQGYSNGNGPDHQLASSTGNNNHSGNGMWGSPGCPKPSEYVQGLIGVVLLALNSLKNEKIMPTEANITDCIRYGDPRHRNTDVKKALESAIEQQMVVKQNLGALQLYVGKNDKLWKCINPIAGNPKQHSKETWDEVQKFLTTSSGRSALMGTQCK 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g00493 566 CDD PIN_limkain_b1_N_like 16 140 - -
Adu06g00493 566 MobiDBLite consensus disorder prediction 314 338 - -
Adu06g00493 566 MobiDBLite consensus disorder prediction 410 439 - -
Adu06g00493 566 PANTHER ACID BINDING PROTEIN, PUTATIVE-RELATED 2 563 - -
Adu06g00493 566 MobiDBLite consensus disorder prediction 410 444 - -
Adu06g00493 566 Gene3D - 7 159 - -
Adu06g00493 566 MobiDBLite consensus disorder prediction 250 305 - -
Adu06g00493 566 MobiDBLite consensus disorder prediction 196 338 - -
Adu06g00493 566 MobiDBLite consensus disorder prediction 196 210 - -
Adu06g00493 566 MobiDBLite consensus disorder prediction 363 394 - -
Adu06g00493 566 MobiDBLite consensus disorder prediction 228 242 - -
Adu06g00493 566 Pfam NYN domain 16 152 IPR021139 GO:0004540
Adu06g00493 566 MobiDBLite consensus disorder prediction 377 394 - -
Adu06g00493 566 PANTHER LIMKAIN B LKAP 2 563 IPR024768 GO:0005777|GO:0010468|GO:1903231
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g00493 Adu-Chr6 5856699 5860662 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g00493 8 199 C2H2 Transcription Factor Family AT5G61190 71.282 6.22e-87 288
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g00493 - - gmx:100794608 935.636
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu06g00493 06 5856699 5860662 Adu06g00493 06 5856699 5860662 ECH