Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g00485 ATGGGTGGTAATCTTAATGCTGAATTATCCAAGAAAACTCCATTTCTTGGACTCAAGGTTTGGGAAATAGTTGGAGTTGTGGTTGGATTGTCTATTATTATGATCCTCTCCTTGCTCTCACTGTGTCTTACCTCAAGGAAGAAATCTAGAAAATCCAATGATAAGAACATTCCTGTTAGTCAGATACCAACTGTCTCAAAGGAAATCAAGGAAGTGCGGGTTGAGCAAGTATCACCGAATGGGTTTGCTTCCCATGATGGAATACTTCTTACCATTCATGACAAAACCGATGACAAAGAATCAGACAAGGTCATGGTTCATTTAGGTGTGGGGAAGATGAAGAATAATGGGGGTAGTAGCAGCCAATTAGGCTCATTTCATCCAATAGAGAAAGATGGAGGTGGGTCACTTTCTGGAGAAGATGGTAGCTTCGGCACGGTTGCGGTGCACAACCACTCTTCTTCTTACCCTATAACAGCTCCTTCGCCTCTGTCTGGCCTCCCAGAGTTCTCTCACTTGGGCTGGGGTCACTGGTTTACCTTGAGGGATCTTGAACTTGCTACGAACCGTTTTTCCAAAGACAATGTCATCGGTGAAGGTGGTTATGGAGTTGTTTACCGAGGACAGTTGATCAACGGGACACCGGTGGCAGTTAAAAAGATACTCAACAACATTGGTCAAGCTGAGAAAGAATTTAGAGTGGAAGTTGAAGCCATTGGACATGTCCGGCACAAAAACTTGGTTCGCCTTTTGGGGTACTGCATTGAAGGGACTCACAGGATGTTAGTCTATGAGTATGTGAATAATGGAAACTTGGAGCAATGGCTTCATGGAGGTATGCGTCACCATGGATATCTTACCTGGGAAGCGCGTATCAAGATTCTCCTTGGAACGGCCAAAGCGCTTGCATATTTGCATGAAGCAATTGAGCCAAAGGTGGTACACCGAGATATAAAGTCAAGTAATATATTAATTGATGATGATTTCAATGCCAAGGTTTCTGATTTTGGCCTGGCAAAGTTATTGGGTGCTGGAAAGAGCCATGTCACAACACGAGTTATGGGAACCTTTGGGTATGTGGCTCCTGAATATGCAAATACTGGCCTTCTTAATGAAAAGAGTGATGTTTATAGCTTTGGTGTTTTGCTACTGGAAGCAATTACCGGAAGAGATCCAGTAGACTATGGACGCCCAACACATGAAGTGAATCTGGTTGATTGGCTGAAGATGATGGTTGGAAACAGGAGATCAGAAGAAGTGATGGATCCAAACATTGAGACAAAACCATCAATCAGAGCTTTAAAACGGGCACTCTTAACTGCTTTAAGATGCTTGGATCCAGATTCTGAGAAAAGGCCCAAGATGAGCCAAGTTGTGCGTATGCTGGAGTCAGAAGAATACCCTTTAGCAAGAGAGGACCGGAGGAACAGAAGAAACCGAGGGGAAAGTGGTGATATTGATTCCCAAAAGGATTATTCTGACACAGACAAGAGTGAGATTCAAGGTTCTAGATAA 1515 0.435 MGGNLNAELSKKTPFLGLKVWEIVGVVVGLSIIMILSLLSLCLTSRKKSRKSNDKNIPVSQIPTVSKEIKEVRVEQVSPNGFASHDGILLTIHDKTDDKESDKVMVHLGVGKMKNNGGSSSQLGSFHPIEKDGGGSLSGEDGSFGTVAVHNHSSSYPITAPSPLSGLPEFSHLGWGHWFTLRDLELATNRFSKDNVIGEGGYGVVYRGQLINGTPVAVKKILNNIGQAEKEFRVEVEAIGHVRHKNLVRLLGYCIEGTHRMLVYEYVNNGNLEQWLHGGMRHHGYLTWEARIKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDDDFNAKVSDFGLAKLLGAGKSHVTTRVMGTFGYVAPEYANTGLLNEKSDVYSFGVLLLEAITGRDPVDYGRPTHEVNLVDWLKMMVGNRRSEEVMDPNIETKPSIRALKRALLTALRCLDPDSEKRPKMSQVVRMLESEEYPLAREDRRNRRNRGESGDIDSQKDYSDTDKSEIQGSR 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g00485 504 MobiDBLite consensus disorder prediction 450 498 - -
Adu06g00485 504 ProSitePatterns Protein kinases ATP-binding region signature. 197 220 IPR017441 GO:0005524
Adu06g00485 504 Pfam Protein kinase domain 192 460 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu06g00485 504 SMART serkin_6 191 462 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu06g00485 504 PANTHER OS01G0323000 PROTEIN 3 501 - -
Adu06g00485 504 SUPERFAMILY Protein kinase-like (PK-like) 175 467 IPR011009 -
Adu06g00485 504 CDD STKc_IRAK 197 463 - -
Adu06g00485 504 ProSiteProfiles Protein kinase domain profile. 191 470 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu06g00485 504 MobiDBLite consensus disorder prediction 450 504 - -
Adu06g00485 504 Gene3D Phosphorylase Kinase; domain 1 173 266 - -
Adu06g00485 504 PANTHER RECEPTOR-LIKE PROTEIN KINASE-RELATED 3 501 - -
Adu06g00485 504 Gene3D Transferase(Phosphotransferase) domain 1 267 479 - -
Adu06g00485 504 ProSitePatterns Serine/Threonine protein kinases active-site signature. 313 325 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g00485 Adu-Chr6 5770222 5774853 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g00485 168 497 Trihelix Transcription Factor Family AT1G70460 47.463 2.83e-91 291
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Adu06g00485 Pkinase 7.8e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g00485 - - gmx:100787014 813.142
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu09g01119 09 21829302 21837369 Adu06g00485 06 5770222 5774853 PCT