Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g00472 ATGGTCCCCAAATTTGTTCAGTGGAGGACGCATACCAGAGCAACCTATATATTGGCGAGCAGGCGCAGCGTCGGAGAAGCTCTTGGTTCCAACACAGAAAACACATCCAAAGCTGCAATGGGGATCGATATTAAGGCTGGCGGCAAGAGCAAAAAGAGCAAAAGGACCGCACCCAAGTCCAATGATATCTACCTCAAGCTCCTCGTCAAGCTTTACCGCTTCCTTGTGAGGAGGACCGGCAGCAATTTCAATGCCGTGATACTGAAGCGCTTGTTCATGAGCAAGGTTAACAAGCCTCCGCTTTCTTTGTCACGCTTGATTAAGTTCATGAAGGGAAAGGAAGGTAAAATTGGCGTTGTAGTGGGAGCTGTAACCGATGATATCAGAGTGTATGAAGTTCCTGCATTGAAGGTTACTGCACTCAGGTTTACAGAGACTGCACGTGCTAGAATAGAGAAGGCTGGTGGTGAATGCTTGACATTTGATCAGCTTGCACTTAGGGCTCCTCTCGGACAGAACACGGTCCTTCTTAGAGGCCCAAAGAACTCCAGGGAAGCTGTGAAACACTTTGGTCCTGCTCCTGGTGTTCCTCACAGCCATACCAAGCCTTATGTACGATCTAAGGGAAGGAAGTTTGAGAGGGCTAGAGGAAGGAGAAACAGCAAAGGATTTAGGGtttaa 681 0.4816 MVPKFVQWRTHTRATYILASRRSVGEALGSNTENTSKAAMGIDIKAGGKSKKSKRTAPKSNDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKPPLSLSRLIKFMKGKEGKIGVVVGAVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGRRNSKGFRV 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g00472 226 Pfam Ribosomal protein 60S L18 and 50S L18e 41 226 IPR021131 -
Adu06g00472 226 PANTHER 60S RIBOSOMAL PROTEIN L18-1-RELATED 40 225 - -
Adu06g00472 226 MobiDBLite consensus disorder prediction 190 226 - -
Adu06g00472 226 Gene3D - 40 226 - -
Adu06g00472 226 MobiDBLite consensus disorder prediction 203 226 - -
Adu06g00472 226 PANTHER 60S RIBOSOMAL PROTEIN L18 40 225 IPR000039 GO:0003735|GO:0005840|GO:0006412
Adu06g00472 226 SUPERFAMILY Ribosomal proteins L15p and L18e 59 178 IPR036227 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g00472 Adu-Chr6 5664171 5666108 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g00472 42 226 Cytoplasmic Ribosomal Protein Gene Family AT2G47570 77.419 1.57e-103 295
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g00472 K02883 - tcc:18613591 345.895