Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g00466 ATGGCAGGGGGAGACCCAGAGAGGAATAAAAGACTAGTCCTTATAGGAGTCTCAACCTTCTTATTGGTGGCCATGGTGGTGGCCGTCACACTCAGCGTCACCTTGAACAAGAACTCCAGCGATGGTTCAAAGGCAGAAGACCAGAGCCATGTTGCATCGTCGGTGAAAGCGGTGAAGACCCTCTGCGCCCCTACAGATTACAGAGAGGAATGCGAGCAGTCATTGTCCGCAGAAGCCGGCAACACCACGGATCCAAGAGAACTCATCAAGATCGCATTCAACATCACCATCAAGAGGATCACCGATGGCCTTGAGCAGACCCAGATGCTTCAGGAATTGGAGAACGACCCCATGGCCAAGCAGGCTCTCGACTCTTGCAAGCAACTCATGGACCTCTCCATTGACGAGTTCAACAGGTCCCTCGACAAGCTTGGAAGGTTCGACCTCAACAACATCGACAACATTCTCAGCAGCTTGAAGGTCTGGCTCAGCGGTGCCATCACCTACCAGGAGACCTGCCTTGACGGCTTCGAGAACACCACCAGCAGCGCCGGCGAGCAGATGAAGGAATTGTTGAGGACCGCCATGCACATGAGCAGCAATGGCCTCGCCATCATCACCGAGCTCGACAAGACCATGAGCGCCATGCATTTCCCCTCCACCCAGCCCGCCGGAGCCCGCCGCCTGATGTCCGAGGACGACGAGGACCAGGACCAGGATCAGGAGCTACCCGAGTGGATCGAGGACCGCATCGCCGTCCGCAAGCTTATGGCTACTGTTGGTGGCGGAAGAAGGATCAAGGCTCACGTGACAGTTGCAAAGGATGGTTCTGGTGATTTCCAGACCATCGCAGAAGCCTTGAGAAAGGTTCCTTCAAATAACAAGAAGCCCTTCATCATCCACATCAAGGAGGGTGTCTACCAGGAGTACCTTGAAGTCCCCAGGAACTTGACCCACGTTGTCTTCATCGGCGATGGTGGTCACAAGACCCGCATCACCGGCGATAAGAACTTCATCGATGGCGTTAACACTTACAAGACCGCCACCGTTGCTGTTCAAGGAGACTACTTCGTTGCCATGGGAGTAGGATTCGAGAACTCAGCCGGAGCAGCGAAGCACCAGGCAGTGGCTCTGAGGGTGCAAGCAGACAAATCCATCTTCTACAAGTGCAGAATGGACGGATACCAAGACACACTGTACGCCCACACCATGCGTCAGTTCTACAGAGACTGCGTGATCTCAGGCACCATCGATTTCGTGTTCGGAGATGCAGTGTCAGTCTTCCAGAACTGCACCTTCGAGGTGAGGAAGCCATTGGCAAACCAACAGTGCATTGTGACAGCACAAGGCAGGAAGGAGAGGTACCAGCCAACAGGAATTGTGATCCAGGGTGGTTCCATCGTGTCCGACCCAGAATACTTCCCAGTTAGGTTCACCAACAAGGCCTTCCTTGCTCGTCCATGGAAGAATTACTCAAGGACCGTCTTCTTGGATACCTACCTTGATGACTTGGGCGGGGACGGAGAATGCCTCCTTAGCATAGTTTTCATCCCTGCATTCTATTCTTCTCCCAACGCCGAGGGACTCTCCGGCATGGACACTTGCTACTACGCTGAGTTCGGCAACCGTGGTCCCGGAGCTGACAACACCAACCGTGTCAACTGGCTTGGTATCAAGAAAAACTTCACAGCACAAGCAGCAAACATGTACAACCCAACCAACTTCTTCCGTGGAGATGAATGGATCAAGGTTACCAAGATTCCCTACAACCCTGGCCAGCCCGCTCCCGCCAGTAACAGTAATTTTGCCGCCGCCTTGTTGCGCCGAGTTGCAGCTGCCCCTAGAAGCAGCCCTTCCTCCTCTTCCCCTGCTCCTGCTTCTTCTCCGACCGGGGCCGCCACCACCACTGCCACCTCCTCCCCTGCTCCTTCCCCTGCTAATCTCTAA 1947 0.5449 MAGGDPERNKRLVLIGVSTFLLVAMVVAVTLSVTLNKNSSDGSKAEDQSHVASSVKAVKTLCAPTDYREECEQSLSAEAGNTTDPRELIKIAFNITIKRITDGLEQTQMLQELENDPMAKQALDSCKQLMDLSIDEFNRSLDKLGRFDLNNIDNILSSLKVWLSGAITYQETCLDGFENTTSSAGEQMKELLRTAMHMSSNGLAIITELDKTMSAMHFPSTQPAGARRLMSEDDEDQDQDQELPEWIEDRIAVRKLMATVGGGRRIKAHVTVAKDGSGDFQTIAEALRKVPSNNKKPFIIHIKEGVYQEYLEVPRNLTHVVFIGDGGHKTRITGDKNFIDGVNTYKTATVAVQGDYFVAMGVGFENSAGAAKHQAVALRVQADKSIFYKCRMDGYQDTLYAHTMRQFYRDCVISGTIDFVFGDAVSVFQNCTFEVRKPLANQQCIVTAQGRKERYQPTGIVIQGGSIVSDPEYFPVRFTNKAFLARPWKNYSRTVFLDTYLDDLGGDGECLLSIVFIPAFYSSPNAEGLSGMDTCYYAEFGNRGPGADNTNRVNWLGIKKNFTAQAANMYNPTNFFRGDEWIKVTKIPYNPGQPAPASNSNFAAALLRRVAAAPRSSPSSSSPAPASSPTGAATTTATSSPAPSPANL 648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g00466 648 SUPERFAMILY Pectin lyase-like 266 591 IPR011050 -
Adu06g00466 648 PANTHER PECTINESTERASE 12 595 - -
Adu06g00466 648 PANTHER PECTINESTERASE 12 595 - -
Adu06g00466 648 ProSitePatterns Pectinesterase signature 2. 413 422 IPR033131 -
Adu06g00466 648 Pfam Pectinesterase 269 579 IPR000070 GO:0030599|GO:0042545
Adu06g00466 648 CDD PMEI-like_3 60 211 - -
Adu06g00466 648 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 57 209 IPR035513 -
Adu06g00466 648 MobiDBLite consensus disorder prediction 221 241 - -
Adu06g00466 648 MobiDBLite consensus disorder prediction 614 648 - -
Adu06g00466 648 Gene3D - 263 593 IPR012334 -
Adu06g00466 648 ProSitePatterns Pectinesterase signature 1. 294 313 IPR018040 -
Adu06g00466 648 TIGRFAM PME_inhib: pectinesterase inhibitor domain 24 209 IPR006501 GO:0004857
Adu06g00466 648 Pfam Plant invertase/pectin methylesterase inhibitor 57 205 IPR006501 GO:0004857
Adu06g00466 648 SMART PMEI_2 53 205 IPR006501 GO:0004857
Adu06g00466 648 MobiDBLite consensus disorder prediction 613 648 - -
Adu06g00466 648 Gene3D Invertase/pectin methylesterase inhibitor family protein 52 211 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g00466 Adu-Chr6 5582713 5585903 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g00466 5 645 Carbohydrate Esterase AT3G05610 45.370 0.0 597
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g00466 K01051 - gmx:100801686 775.393