Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g00465 ATGGCAATAACTTCAAAGATAATGTCCCTAACATTATGCATGTTTTTATGGCAATTTGCATCTCTTGCATTATTATCAGCATCATCAACTTCTTCCTCCATAGACACAATTTGCAACCTCACACCTTATCCAACATTTTGCAAATCCAATTCCCCTTCTAATGTCCAAGGAGGTGACATTCATGAGTATGGCCGTTTTTACACAAACAAGTCCCTGTCATCATCAAGGGATGTTCTCTCATTACTCTCTACCTACTTACAATCTCCCTCCAAATTCTCCCAGTCAACGATTCTCGCCCTTGAAGATTGCCACCTCTTAGTTGACCTCAACATAGATTTCTGGACCAAGACTCTACAAACTGTAGACACCACAAACAGCACCCTTAATAGTTCCGAGGCTGAAAACCTTCTTACCATGATTAGTGCTACATTAACCAATCTCGATACCTGCTTAGAAAGCCTTAAAGAAGCCACGTCATCAACCCCTGATGACAACCTAGTAAGCCATGTTTCAAACGGAACCATGTTTTCCAGCATATCTCTTGCACTCTTTAAACGGGGTTGGACTTCCAGCATAACCACACAAAAGAGTCGAAAGCTGTTTTCTCAAAGAAATGACGCTTACGCGTGGGAACAGAGGGTTTACGAGATAATCAGAAAGAGAGGGAGAAAGCTGCTTCAGAGTGCTCCTGACGGTGTTGTTGTGAACCAAACGGTGGTGGTGAATCCTGATGGCTCTGGAAACTTCACAACTATCAACGATGCGGTGGCTGCGGCACCCAACAACACCGGTGGTGTCAATGGTTTCTTTGTGATTTATGTGGTTGCAGGAGTGTACGAAGAGTATGTATCTATTCCAAAATACAAGCAGTACTTGATGATGATCGGTGATGGTATCAACAAGACCATAATCACCGGCAATCACAGCGCCGGTACTGGCTACACTACCTTCAATTCTTATTCATTTGCTGTGGTTGCGCAAGGATTCGTGGCTATGAATATAACGTTTCGCAACACAGCAGGAGCAAGCAATTACCAAGCGGTGGCTCTTAGAAGCGGAGCAGATCTATCCGCATTCTACAATTGCAGCTTCGAAGGGTACCAAGACACTTTATACACACATTCAATGAGACAATTCTACAGAGATTGCGACATTTACGGCACAGTTGACTTCATATTTGGCAACGCAGCAGTTGTGTTGCAAAACTGTAACATTTTGCCACGCCTCCCAATGAGTGGCCAGTACAACACCATCACAGCACAGGGCAGAACTGACATTAACCAAAACACAGGAACATCTGTACACAACTGTACAATAACCGCCGCCACCGACTTGGGCACCACTAAAACGTATCTTGGGAGGCCATGGAAGGAGTATTCAAGAACGGTTTACATGCAGTCTTTCATGGACAGTTTGATTGATCCTGCTGGTTGGGCAGAGTGGTCAGGGACATTGTATTTGGACACACTTTATTATGCGGAATATGATAATTGGGGTCCTGGATCTAACACTAGTAATAGGGTCACTTGGGCAGGCTACCATGTCATTAATGCCACTGATGCACAGAATTTCACAGTTTCTAATTTCATATCCGGTGCTGCATGGTTACCTCCTACTGGAGTCCCCTACTTTCTTGATTTAATTTGA 1647 0.4396 MAITSKIMSLTLCMFLWQFASLALLSASSTSSSIDTICNLTPYPTFCKSNSPSNVQGGDIHEYGRFYTNKSLSSSRDVLSLLSTYLQSPSKFSQSTILALEDCHLLVDLNIDFWTKTLQTVDTTNSTLNSSEAENLLTMISATLTNLDTCLESLKEATSSTPDDNLVSHVSNGTMFSSISLALFKRGWTSSITTQKSRKLFSQRNDAYAWEQRVYEIIRKRGRKLLQSAPDGVVVNQTVVVNPDGSGNFTTINDAVAAAPNNTGGVNGFFVIYVVAGVYEEYVSIPKYKQYLMMIGDGINKTIITGNHSAGTGYTTFNSYSFAVVAQGFVAMNITFRNTAGASNYQAVALRSGADLSAFYNCSFEGYQDTLYTHSMRQFYRDCDIYGTVDFIFGNAAVVLQNCNILPRLPMSGQYNTITAQGRTDINQNTGTSVHNCTITAATDLGTTKTYLGRPWKEYSRTVYMQSFMDSLIDPAGWAEWSGTLYLDTLYYAEYDNWGPGSNTSNRVTWAGYHVINATDAQNFTVSNFISGAAWLPPTGVPYFLDLI 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g00465 548 Pfam Plant invertase/pectin methylesterase inhibitor 33 183 IPR006501 GO:0004857
Adu06g00465 548 Gene3D Invertase/pectin methylesterase inhibitor family protein 28 186 IPR035513 -
Adu06g00465 548 CDD PMEI-like_3 36 189 - -
Adu06g00465 548 PANTHER PECTINESTERASE 14 544 - -
Adu06g00465 548 TIGRFAM PME_inhib: pectinesterase inhibitor domain 6 185 IPR006501 GO:0004857
Adu06g00465 548 ProSitePatterns Pectinesterase signature 2. 385 394 IPR033131 -
Adu06g00465 548 PANTHER PECTINESTERASE 14 544 - -
Adu06g00465 548 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 32 186 IPR035513 -
Adu06g00465 548 SUPERFAMILY Pectin lyase-like 234 545 IPR011050 -
Adu06g00465 548 Gene3D - 232 547 IPR012334 -
Adu06g00465 548 SMART PMEI_2 29 183 IPR006501 GO:0004857
Adu06g00465 548 Pfam Pectinesterase 239 532 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g00465 Adu-Chr6 5568181 5571266 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g00465 10 548 Carbohydrate Esterase AT4G02330 52.098 0.0 553
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g00465 K01051 - gmx:100801141 780.785