Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g00447 ATGGCACCAAACAAGAGAGGATCATCAAGCGATGAGGGTAATGATGAGAGAGACCTTCAGCTCCCTCTTTGTAAACGAAAAGCAGCACTACCAGACACTCGTATTTCTGCTTCCGGTAGTGGTTCCACCAACATGGCGTTGATGTTGGAACCTGTAATTCGGAAAGTGTTACAGGAGATGATGCCACCTATGCTAGAACAGGTGATGCCACGTATGTTAGAACAGGTGATTCCACCTATACTGCAGCGTTACCTACCTTCCCCATGGGGGCAGATTAGTCCAGCAGCTGGTAGAGGCAGATCATTGCAGTTATGTCTGATGAAAGGGTTGCCTGCAACCATTTTCACACAGATCAACATCACAGCAGAGGACAGTTCCCCGCTCCAGGTTGCGTTGTGTGATGCCACGATTCAGAACAGCAAGGTAACAAAGGGAGATGGTCCCTCCTTGAAGGTCCAGCTGTGTGTCCTGAAGGCTGATTTTGAAAGTGAGGATTGGACTGCTGAGGAATTCAATAAAAACATAGAAAGTCCAAGAGAAGGAAAAGGACCATTACTCAAGGGAGACACGGTTATTACCATGGAAAATGGAGTTGGCTTCTTCAAGAATGTTGAGTTTACTGATAACTCTTGCTGGACAAGAAGCGGCAAGTTCCGGCTTGGAATTAAGGTACTGTCATCGAATTCAGACATCAAGGAAGCAAGAAGCGAGCGTATAAGGGTGAAGGATAAGCGAGGAGTGGCAAATGAGAAACCGGATCGTCCTTCATTGGATGACAAGGTGAGTTGTCTGCATAAGATAGCGAAAAATGGTCCGATCCGCAAGCAGTTGTCCTCCAATGGAATCAAAACTGTGAAGGATCTGTTGCGCTTGCTCACAACTGACCAAGCTTCACTAAAACAGAAAACCGGCAACATTCCGGGGAAGTCATGGGAGAAGATTATTGAGCATGCCAAGTCTTGTGCCATAGATAATGATGAGCGCTACATCTATCAATATTTCACAGGAACAGCAGAGCAACCAATAGCAGCATCCCTTGTCTTAAATTGCATCTATGAGCCTGTGGCGATTTCATTTGATGGCCAAAACTTTTGCAGCCTAGAGTCTTTGAATTCGGAAGGCAAGCGTTGGGTGGAAACTGTAAAGCGGCAAGCATACAAGAACTTGAAGGATTTGAAGCCATTTGGCGCAAGTTCAGCGGGTCAATCTCTGGAAAACTTCGATTTCCCAGTTTCTCATCAGCAAGGGCAAGCACAAATGGTTCAAGCATCGGCATCGACAGCATCAGGCGCACAGAGTGTTAACGAGCAAGTAGGGTGTTCCAGTCAACATCAGGTGGGACGGGAAGAGTTCGTTGGCGATAGCGGATGGAGCAACATCAACATGGTTGATCCGTTTCCAAATTACTCGGACCCAGTTTACCCCTTTTACTATGTTGCAGGTGATTATGGGGCAACATCATCCAACGATTCATTCCCTGTCTTTGATATGCATTGGTCAAGCAAAGGTGGGTGCAACACTGTGTGGGCTAAAATCCGAACTGCTGTCATTCGTAATGTTCTTAAATGGACCATTCTCTATGCCGCCAAAAGGAAGCCCAAGCTTCTTGTTCCCTATCAGTAA 1623 0.464 MAPNKRGSSSDEGNDERDLQLPLCKRKAALPDTRISASGSGSTNMALMLEPVIRKVLQEMMPPMLEQVMPRMLEQVIPPILQRYLPSPWGQISPAAGRGRSLQLCLMKGLPATIFTQINITAEDSSPLQVALCDATIQNSKVTKGDGPSLKVQLCVLKADFESEDWTAEEFNKNIESPREGKGPLLKGDTVITMENGVGFFKNVEFTDNSCWTRSGKFRLGIKVLSSNSDIKEARSERIRVKDKRGVANEKPDRPSLDDKVSCLHKIAKNGPIRKQLSSNGIKTVKDLLRLLTTDQASLKQKTGNIPGKSWEKIIEHAKSCAIDNDERYIYQYFTGTAEQPIAASLVLNCIYEPVAISFDGQNFCSLESLNSEGKRWVETVKRQAYKNLKDLKPFGASSAGQSLENFDFPVSHQQGQAQMVQASASTASGAQSVNEQVGCSSQHQVGREEFVGDSGWSNINMVDPFPNYSDPVYPFYYVAGDYGATSSNDSFPVFDMHWSSKGGCNTVWAKIRTAVIRNVLKWTILYAAKRKPKLLVPYQ 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g00447 540 Pfam Calmodulin binding protein central domain 256 321 IPR046830 -
Adu06g00447 540 Pfam Calmodulin binding protein C-terminal domain 345 394 IPR046829 -
Adu06g00447 540 Pfam Calmodulin binding protein-like N-terminal domain 102 244 IPR046831 -
Adu06g00447 540 PANTHER OS02G0177800 PROTEIN 26 531 IPR012416 GO:0005516
Adu06g00447 540 PANTHER CALMODULIN-BINDING PROTEIN 60 G 26 531 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g00447 Adu-Chr6 5303265 5305651 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g00447 47 437 Calmodulin-binding Proteins AT5G26920 34.739 2.48e-61 206
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g00447 - - aip:107645943 964.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu06g00447 06 5303265 5305651 Adu06g00447 06 5303265 5305651 ECH