Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g00434 ATGTCTCTGCGACCGAGTGCCAACTCTCGCTCGGAGACGAGGAAGAAGTCCTACAAGATCGGCGTCGACGCCGACGAGGCTCGTCGCCGGAGGGAGGACAACCTGGTCGAGATCAGGAAGAACAAGCGCGAGGACAGTCTTCTTAAGAAACGAAGGGAGGGCCTTCTCCTTCACCCTCATTTGCCCAATAACAACAACAACCATGCCCCTTCTCCTTCCTTCCCCGCCAACCGGTATTCACTTGTTGTTGTTGGATATTCCCATATGAATTTTAACTTTCATTGGCTGGTCTGTTTAGAACGCAGCCCTCCAATTGATGAGGTCATTAAGGCAGGTGTTGTCCCTAGGTTTGTGGAGTTCTTGGGAAGGCATGATCTACCACAGTTGCAATTTGAGGCTGCATGGGCTCTAACAAATGTTGCATCTGGAACATCTGAGCACACAGGAGTTGTCATTAAACATGGTGCTGTTCCCCTGTTTGTGCAGCTTCTGAGCTCTGGCAGTGATGACGTTAGAGAACAGGCAGTATGGGCCTTGGGTAATGTTGCTGGTGACTCCCCAAACTGTAGGGATCTTGTTCTAAGTCATGGTGCACTCATGCCATTACTGTCTCAATTGAATCAACATTCTAAACCATCTATGTTGAGGAATGCTACATGGACTTTGTCTAATTTCTGCCGTGGAAAGCCTCCAACACCTTTTGAACAGGTAAAGCCTGCCTTGCCTGTTCTTCGGGAGCTCATTTACTTGAATGATGAAGAAGTTCTAACAGATGCGTGCTGGGCTCTATCTTACCTTTCAGATGGCCCAAATGAAAAAATTCAAGCTGTAATTGAAATAGGAGTATGCCCAAGACTTGTGGAGCTCTTGCTACATCCATCACCTACAGTTCTTATACCTGCTCTTCGAACTGTAGGAAATATTGTTACCGGTGACGATGCTCAGACTCAGTTTGTAATTGATAAAGGAGTTCTCCCCTGTCTTCACCAACTTCTTTCGCAAAATAACAAGAAAAACATCAGGAAAGAAGCTTGTTGGACGATATCAAATATCACAGCTGGGAATAGAATTCAAATACAGGCTGTCATTGAGGCCAACGTTATTCCTCCTCTTGTCAATCTTCTTCAGAATGCAGAATTTGAAATCAAGAAGGAAGCTGCATGGGCCATTTCCAATGCAACTTCTGGAGGATCGCATGAGCAGATTCAGTTCCTGGCAAATCAAGGTTGCATCAAGCCATTGTGTGATCTATTGACATGTCCCGACCCAAGGATTGTGACAGTTTGTCTTGAGGGGCTGGATAACATTTTAAAGGTTGGAGAAGCTGACAAGGAAATGGGACACAACGGCGGGATCAATGTTTTCGCTCAAATGGTTGACGAATGTGAAGGATTGGATAAGATTGAAAATCTGCAGACCCATGACAACAATGAGATTTATGAGAGGGCTGTGAAGATTTTGGAGAGATATTGGGCTGAGGATGAATTGGAAGTTGAGCAGAGTCAGAATGGCGGGGATGGTACTCAGCAAGGTTTTTCTTTTGGGACTAACCAGCCAACCCTCCCGCCAGGTGGTTTTAACTTCGGGTGA 1590 0.4591 MSLRPSANSRSETRKKSYKIGVDADEARRRREDNLVEIRKNKREDSLLKKRREGLLLHPHLPNNNNNHAPSPSFPANRYSLVVVGYSHMNFNFHWLVCLERSPPIDEVIKAGVVPRFVEFLGRHDLPQLQFEAAWALTNVASGTSEHTGVVIKHGAVPLFVQLLSSGSDDVREQAVWALGNVAGDSPNCRDLVLSHGALMPLLSQLNQHSKPSMLRNATWTLSNFCRGKPPTPFEQVKPALPVLRELIYLNDEEVLTDACWALSYLSDGPNEKIQAVIEIGVCPRLVELLLHPSPTVLIPALRTVGNIVTGDDAQTQFVIDKGVLPCLHQLLSQNNKKNIRKEACWTISNITAGNRIQIQAVIEANVIPPLVNLLQNAEFEIKKEAAWAISNATSGGSHEQIQFLANQGCIKPLCDLLTCPDPRIVTVCLEGLDNILKVGEADKEMGHNGGINVFAQMVDECEGLDKIENLQTHDNNEIYERAVKILERYWAEDELEVEQSQNGGDGTQQGFSFGTNQPTLPPGGFNFG 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g00434 529 PANTHER IMPORTIN ALPHA 10 517 - -
Adu06g00434 529 PANTHER IMPORTIN SUBUNIT ALPHA 10 517 - -
Adu06g00434 529 PIRSF Importin_alpha 5 528 IPR024931 GO:0005737|GO:0006606|GO:0061608
Adu06g00434 529 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 155 197 IPR000225 GO:0005515
Adu06g00434 529 Gene3D - 92 492 IPR011989 -
Adu06g00434 529 MobiDBLite consensus disorder prediction 9 24 - -
Adu06g00434 529 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 323 355 IPR000225 GO:0005515
Adu06g00434 529 MobiDBLite consensus disorder prediction 501 529 - -
Adu06g00434 529 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 366 394 IPR000225 GO:0005515
Adu06g00434 529 MobiDBLite consensus disorder prediction 1 24 - -
Adu06g00434 529 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 112 155 IPR000225 GO:0005515
Adu06g00434 529 SUPERFAMILY ARM repeat 14 493 IPR016024 -
Adu06g00434 529 Pfam Armadillo/beta-catenin-like repeat 399 436 IPR000225 GO:0005515
Adu06g00434 529 Pfam Armadillo/beta-catenin-like repeat 186 227 IPR000225 GO:0005515
Adu06g00434 529 Pfam Armadillo/beta-catenin-like repeat 145 183 IPR000225 GO:0005515
Adu06g00434 529 Pfam Armadillo/beta-catenin-like repeat 271 309 IPR000225 GO:0005515
Adu06g00434 529 Pfam Armadillo/beta-catenin-like repeat 312 353 IPR000225 GO:0005515
Adu06g00434 529 Pfam Armadillo/beta-catenin-like repeat 102 142 IPR000225 GO:0005515
Adu06g00434 529 Pfam Armadillo/beta-catenin-like repeat 240 267 IPR000225 GO:0005515
Adu06g00434 529 Pfam Armadillo/beta-catenin-like repeat 358 394 IPR000225 GO:0005515
Adu06g00434 529 Pfam Importin beta binding domain 14 60 IPR002652 GO:0006606|GO:0061608
Adu06g00434 529 Gene3D - 13 52 IPR036975 GO:0006606
Adu06g00434 529 Pfam Atypical Arm repeat 453 497 IPR032413 -
Adu06g00434 529 SMART arm_5 101 142 IPR000225 GO:0005515
Adu06g00434 529 SMART arm_5 312 353 IPR000225 GO:0005515
Adu06g00434 529 SMART arm_5 398 438 IPR000225 GO:0005515
Adu06g00434 529 SMART arm_5 144 184 IPR000225 GO:0005515
Adu06g00434 529 SMART arm_5 185 227 IPR000225 GO:0005515
Adu06g00434 529 SMART arm_5 270 310 IPR000225 GO:0005515
Adu06g00434 529 SMART arm_5 355 395 IPR000225 GO:0005515
Adu06g00434 529 SMART arm_5 229 268 IPR000225 GO:0005515
Adu06g00434 529 MobiDBLite consensus disorder prediction 497 529 - -
Adu06g00434 529 ProSiteProfiles IBB domain profile. 1 60 IPR002652 GO:0006606|GO:0061608
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g00434 Adu-Chr6 5157161 5161556 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g00434 160 417 U-box Gene Family AT1G23030 25.385 3.42e-08 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g00434 K15042 - jre:108987897 835.099
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu04g00907 04 14253980 14257346 Adu06g00434 06 5157161 5161556 ECH
Adu06g00434 06 5157161 5161556 Adu06g00434 06 5157161 5161556 ECH