Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g00405 ATGACGGATTCGCAGTCCAATTCAGAGATTTTCAGTGTTCGGATTGTCTCCATCGACTATTACATGGCTCCGCCGATCCAAGGCGCCGATATCTGTTACAGCAGCTTCCACGGGGGAAAAGTGAAGGAGGTTCCTGTTATAAGAGTGTATGGTTCTACTCCTTCAGGCCAGAAGACTTGCTTGCACATTCACCGAGCCTTGCCATATATGTATGTGCCATGTTCGGATATACCACTTCAACCAGACCAAGAAGGTGATGCATACACGTATAAGGTTGCTGCTTCTCTTGAGAAAGCCTTGCAGCTTAAAGGCAGTGCTGGTTCAACAAGGCAGCATGTGCATGGCTGCAGCCTTGTACGAGCAAGAAGATTCTATGGTTACCACTCGTTTGAGGAGTTATTTGTTAAGATATACCTGTATCCAAATAATTTTTATTTATTTGTTTTCCTTTTACATGCTGGTGCTGTTCTTGACAAATGTTTACAACCTCATGAATCACATATTCCCTATATTCTTCAGTTTTTGGCAGACTCAGGTGCTGATGTATGTTTGGAGTCAAAGATGTGGATATCTTCCACTGTCCCATCTGATTGGATGTGGTCACCTGCCGATGACTTTGGTGCTTCATCAAACAATAAGCCTTACTGCCCTAAAAGGCAAAGCACATCTGAGCTTGAAGGAGATGCTTCTGTAGATGAGATTCTTAATCAGCAATTTATAATGTATTCATCTCTCTCACAAACATGCTCGGATGTGAAAATGGTTCAATCACTTGTACCTATATGGGAGGAACAGCAGAAAAGGACTGGAGTTAATGAGGCTACTATGCCTCCTGATCCTGGAAAACCACTTCCAGAAGATGTTATGAAGCTTCTTTCAGCTGGTATTGACTTTGAGAAAAGACTTATTGAATTGTGTAACATAGCTGGAACCACTGTGTCTTTAACTCCTTCTCAGAAAGAATTAAGAGAAACAGACATAATAGGCTCAGCATCACCACCATGTTCATTAAATGATGCCAAAATACACGAAGATGGGGGTGATAACAGCTTCAGTTTGTTGCCTGTGGGCAAAATGCATTCATCTGAAATAATTGGATCGTCGGACATAAAGGCAAGGAAAAGGGAAGCCCAACATCTTCTCAAGTGGCTTGCAACTTCTCAAGCTGCAGAAGATATTAACTCTGATGATGAACTTGTTTGTGAAATGATGCTGAGTCCCCAGCTACCAGATGCAACGATTGATAAACTGCTGGAGAAAGTTAATATGCAATATGAGAGTGAGTCGCAAAAAGAATGTCAGGATATTCTAGATTCAGTTGATGATATGCTTGAGTTGAAGTTTTCTAAGCAAAAGCCTTGTCGTTCAATTGATCATGGTGATCCTATTGAAGTGTCAACTGAGAGTATAATACCCCAAGTTGATGGTTCAGCTGATGATGAATATTCAATTCCATTTGCTAGTTTGGCTGAAACCTCTTCTGCAGCAGAGAGAAATAGTGAATCCAGAAGGCTGTCTGAGTACCATGTCATGCACAGCACTGATACAGCCGTAGTTAGTAAAGATAAGAGGAGTAAGCAATGGGGGTCTTTGCCTTTTTCAGTGGCTGATAAGGTTAACTGCAAAGGAGAACAAGCTATAATGCAAGTGACTTGCCCATTTGAAAGTCAAAGTGGAGATTCTACTGATTCTGATAATGGGGTTAGAAAGAGTGCCCGTATTACAAGAAATGTGGGCAGAACTGTTTCAGAATCAAAACAACAGAGATTTGTTAACTGCTCTTTGCGGGACTTGATGAGGCGGAAGCGATCCTTTCGAGTTGAACAAACTGAATGCGATTCTGGAACAACTAAAAAGCTTGTTTTGGACAGACATGAGGGATCCAATATCTGCCTTTGGAAAAAACGAATGGATTTGAGCACAATTCAAACCAACGAGGAAGAAACAAAACTCCTGAAAAATTGTGATCTTAAACTGAGCAATCATGATAATTTAGTGAGTCGGAAACTGCCACTTCCAGATGGTAAGGATAGTTTCTTACAGGATGATATGCAAAGCGATGAATGTTTTTCTGAAAATGAAATGGAGGCTCCAGAAGCAAGTGATCTGTTTAGGACTTCTGGAAATCAAGGTTCTTTAGTGTATATGCCAAATCCCTTTCCAGATGTTCAGTTAATGAGAACAGATACCAATTATAAAATCATAACTCCTGAGAGGTGTCAACAAACTTATTCTGCATCTTCAAGCAGTGTACAGAACTTATCCATTGATAATAAAGTGTTATGCAAGCCTAATTGCACGAATCAGGATTCTCATGGCAGCATATCTTTTGCACAAGAAAGCCAAATTCCAGCAAGTCACACACGAGTGTTGCTTAATGAGAGAGTTGATAATAAAAAACATGGTGTAAATTTACTGGGTGAGAAGAATATTGTCTCAGAGTCTATTGATGATGACTTGAAGGATAAACACATGGAATTAACTGAAGTAAGTGTAGCTAAGGAAACCTGCTCAACTGACAAGAATCTTGAAAATCTTTTACCCTTGCCAACCATGCCTGATTCCCATTTACATTTGGATGAGGAAAGCTGTGATGAAATGTCAGGTTGGAATGCTCTGGATGTTTTTCTTCCCATTTCCACAAAGGATTCCCAGAAAGAGATGAAGACTTGGAATAAATATGTTGCAATTAAAGCTCCTCGATCTCATGGGAAAAAGGATGTTGCTATCCACTATCAAAATGATGGCTCTCACGTATACGTGCTTACACCTAATATTTTGCCTCCGTCTGTAACCAGTGTGCAGAGATGGCTATCTCTAGATGAGAGAGATCACACAAGTCAAGAAACTGAAGTAGAGGCCAAGGATGTGCCTGAACACACTTCGGGACCTACTCTCCAGCCAAAGCTTTATGATGATAGTAGTGCAGAAAAGAAACCAGTTAAACCATCATGCAATAATGAAGGACAAACAGAAAGAGTGAAGGCAAGTGCAGATGGTTCACAGGATAATTCACAGATATCAGGCCCTATGAGGAAATCAAATTCTACCCCTCTGAGTCAAATTGGCTTTCGAGACCCTTCAAGTGTTGGATGTGGACAGCAATTGACATTACTCAGTATAGAGGTCCTTGCTGAATCAAGAGCAGACCTTTTACCTGACCCTCAGTTTGACGCTATCAACATTGTAGCTCTTGGTTTTCAGAATGATTGTGATTCTATTATTGAAGTTCTTGTTCTTTTGCATAATAAGTTTGAACCTTGTCAGAGAAGTTTTGATGGCTTAGTAGGCTGCAAAGTGTTGGTCTTTTCTGATGAAAAACACTTGTTAAAGGAGTTTATAAATATTGTCTCTTCATCTGACCCTGATATTTTGATGGGCTGGGATATTCAAGGGTATTCTCTTGGTTTCCTGGCAGAAAGGGCTTCACGCCTTGGTTTAGGATTACTTAACAGTTTGTCACGAACTCCATCTGATTCATCGGTTGCTTCTGAAGATGTGAAAATTTCCGGAAAAGGTATCTTGGAATTTGACGATCCTGATACTCCTAGTATAGATTGTTGTGTACAAGGAAGTTCAATAATTGAGGATGAATGGGGACGGACACATGCAAGTGGAGTTCATGTAGGTGGCAGAATTGTCCTTAATGTATGGCGGCTGATCCGCGGAGAAGTTAAGCTGAACTTATATTCAATTGAAGCTGTAGCTGAAGCTGTATTGAGGCGGAAAATTCCATTCTTTCACAACAAGGTGCTGACAAGATGGTTTTCAAGTGGTCCTGGACGAGCAAGATATCGGTGTATCAAATATGTTGTAGAAAGAACAAAGCTGAACCTTGAGATCTTAAACCAACTTGATATGGTGAATCGGACATCAGAACTTGCTCGTGTCTTTGGCATAGACTTTTTTTCTGTTCTATCACGTGGTTCACAATATCGGGTTGAATCCATGTTATTGAGGTTGGCCCATACACAAAACTATCTTGCTATCTCACCTGGAAATCAACAGGTTGCTTCTCAACCTGCCATGGAATGCCTGCCTCTAGTTATGGAACCCGAGTCAGGATTTTATTCTGATCCTGTTGTTGTATTTGACTTTCAATCTTTATATCCATCTATGATAATTGCATACAACCTTTGCTTTTGTACGTGTCTTGGCAAAGTTGTAGCTTCGAAGGCTAACACGCTTGGGGTCAGTTCATTTTCGCCAGAGCAACATGTTCTTCAGTATTTGAAAGATCAAATTTTGCTCACTCCAAATGGTGTTATGTTTGTACCTTCCAAGGTTCGCAGAGGTGTGCTTCCCCGCTTATTGGAAGAGATCTTGTCAACCAGAATAATGGTGAAACAAGCAATTAAAAAGTTGGCTCCCTCAGAGCAAGTGCTTCAGCGGATATTTAATGCAAGGCAGCTGGCATTGAAGCTCATATCCAATGTAACATATGGTTACACTGCTGCTGGATTTAGTGGTCGCATGCCTTGTGCAGAACTTGCAGACAGTATTGTTCAATGTGGCCGTAGTACACTGGAGAGGGCGATCTCATTTGTAAATCTACATGAAAAGTGGAATGCTAGAGTTATTTACGGAGATACTGATAGTATGTTTGTCCTCCTTAAAGGACGCACTATCAAAGAATCTTTCCAAATTGGGAGTGAGATTGCTTCTGCTATCACTGCTATGAATCCTAGTCCTGTTACCCTGAAGATGGAGAAAGTTTATCAACCTTGTTTCCTCCTGACAAAGAAGCGATATGTTGGCTACAGTTATGAAAGCCCTGAACAAATCGAACCTGTTTTTGATGCTAAAGGTATTGAGACAATCCGCAGGGACACGTGTGGTGCAGTTGCAAAGATAATGGAACAGTCTTTGAGATTATTTTTTCAGCATCAGGATTTATTGGAGGTCAAATGTTACTTGCAACGTCAGTGGAAGAGGATACTTTCTGGAAGATTCTCCCTGAAAGATTTCGTCTTTGCAAAGGAGGTTCGTCTGGGTACCTACAGTGGAAGGATCTCTTCACTTCCTCCTGCTGCAATTGTGGCCACTAAGGCAATGAGATCTGATCGTAGGGCAGAACCACGATATGCTGAGAGAATACCTTATGTTGTAATCCATGGTGAGCCTGGAGCCCGCCTGTCTGATATGGTTGTGGATCCATTAGAAGTCTTGGCAATTGATTCTCCATTTAGAATAAATGATTTATATTACATTAACAAGCAAATAATACCAGCCTTGCAGCGTGTCTTTAGCCTTGTTGGCGCTGACCTGATCCAGTGGTTTTTAGAGATGCCCCGTCCTGTAAGGGAAGCATCTATAAAGAATAAGTTCTCTTCAAATTTTCAGAGAACCAGAATTGATTATTACTATCTCTCGAAACATTGTATAGTATGTGGGCAGTTGGTCCAGGCTTCAGCACGTTTGTGTAGTCAATGCTCCAAAAATGAAGCAGCTGCTGCAACAGCAGTGATTAGTAAAACTTCTAAGTTGGAGCAAGAGATGCAACATCTTGTTGCTATATGTCACCACTGTGGCGGCGGTGATAGGCTTCTCGAAAGTGGGGTGAAGTGCACGTCCATTGCATGCACGGTGTTCTATGAGAGGCGGAAAGTTCAGAAAGAATTATTAGCTGCCACTGATGTCGCTGCAGAGAAAGGCTTCTATCCGAAATGCACGGTAGAATGGTTCTAA 5688 0.4116 MTDSQSNSEIFSVRIVSIDYYMAPPIQGADICYSSFHGGKVKEVPVIRVYGSTPSGQKTCLHIHRALPYMYVPCSDIPLQPDQEGDAYTYKVAASLEKALQLKGSAGSTRQHVHGCSLVRARRFYGYHSFEELFVKIYLYPNNFYLFVFLLHAGAVLDKCLQPHESHIPYILQFLADSGADVCLESKMWISSTVPSDWMWSPADDFGASSNNKPYCPKRQSTSELEGDASVDEILNQQFIMYSSLSQTCSDVKMVQSLVPIWEEQQKRTGVNEATMPPDPGKPLPEDVMKLLSAGIDFEKRLIELCNIAGTTVSLTPSQKELRETDIIGSASPPCSLNDAKIHEDGGDNSFSLLPVGKMHSSEIIGSSDIKARKREAQHLLKWLATSQAAEDINSDDELVCEMMLSPQLPDATIDKLLEKVNMQYESESQKECQDILDSVDDMLELKFSKQKPCRSIDHGDPIEVSTESIIPQVDGSADDEYSIPFASLAETSSAAERNSESRRLSEYHVMHSTDTAVVSKDKRSKQWGSLPFSVADKVNCKGEQAIMQVTCPFESQSGDSTDSDNGVRKSARITRNVGRTVSESKQQRFVNCSLRDLMRRKRSFRVEQTECDSGTTKKLVLDRHEGSNICLWKKRMDLSTIQTNEEETKLLKNCDLKLSNHDNLVSRKLPLPDGKDSFLQDDMQSDECFSENEMEAPEASDLFRTSGNQGSLVYMPNPFPDVQLMRTDTNYKIITPERCQQTYSASSSSVQNLSIDNKVLCKPNCTNQDSHGSISFAQESQIPASHTRVLLNERVDNKKHGVNLLGEKNIVSESIDDDLKDKHMELTEVSVAKETCSTDKNLENLLPLPTMPDSHLHLDEESCDEMSGWNALDVFLPISTKDSQKEMKTWNKYVAIKAPRSHGKKDVAIHYQNDGSHVYVLTPNILPPSVTSVQRWLSLDERDHTSQETEVEAKDVPEHTSGPTLQPKLYDDSSAEKKPVKPSCNNEGQTERVKASADGSQDNSQISGPMRKSNSTPLSQIGFRDPSSVGCGQQLTLLSIEVLAESRADLLPDPQFDAINIVALGFQNDCDSIIEVLVLLHNKFEPCQRSFDGLVGCKVLVFSDEKHLLKEFINIVSSSDPDILMGWDIQGYSLGFLAERASRLGLGLLNSLSRTPSDSSVASEDVKISGKGILEFDDPDTPSIDCCVQGSSIIEDEWGRTHASGVHVGGRIVLNVWRLIRGEVKLNLYSIEAVAEAVLRRKIPFFHNKVLTRWFSSGPGRARYRCIKYVVERTKLNLEILNQLDMVNRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNQQVASQPAMECLPLVMEPESGFYSDPVVVFDFQSLYPSMIIAYNLCFCTCLGKVVASKANTLGVSSFSPEQHVLQYLKDQILLTPNGVMFVPSKVRRGVLPRLLEEILSTRIMVKQAIKKLAPSEQVLQRIFNARQLALKLISNVTYGYTAAGFSGRMPCAELADSIVQCGRSTLERAISFVNLHEKWNARVIYGDTDSMFVLLKGRTIKESFQIGSEIASAITAMNPSPVTLKMEKVYQPCFLLTKKRYVGYSYESPEQIEPVFDAKGIETIRRDTCGAVAKIMEQSLRLFFQHQDLLEVKCYLQRQWKRILSGRFSLKDFVFAKEVRLGTYSGRISSLPPAAIVATKAMRSDRRAEPRYAERIPYVVIHGEPGARLSDMVVDPLEVLAIDSPFRINDLYYINKQIIPALQRVFSLVGADLIQWFLEMPRPVREASIKNKFSSNFQRTRIDYYYLSKHCIVCGQLVQASARLCSQCSKNEAAAATAVISKTSKLEQEMQHLVAICHHCGGGDRLLESGVKCTSIACTVFYERRKVQKELLAATDVAAEKGFYPKCTVEWF 1895
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g00405 1895 CDD DNA_polB_zeta_exo 1033 1283 - -
Adu06g00405 1895 Gene3D Palm domain of DNA polymerase 1347 1592 IPR023211 -
Adu06g00405 1895 MobiDBLite consensus disorder prediction 943 958 - -
Adu06g00405 1895 SUPERFAMILY DNA/RNA polymerases 1348 1760 IPR043502 -
Adu06g00405 1895 PANTHER DNA POLYMERASE ZETA CATALYTIC SUBUNIT 7 1888 IPR030559 GO:0006281|GO:0016035|GO:0019985
Adu06g00405 1895 Gene3D - 1065 1344 IPR036397 GO:0003676
Adu06g00405 1895 Pfam C4-type zinc-finger of DNA polymerase delta 1794 1867 IPR025687 -
Adu06g00405 1895 Pfam DNA polymerase family B 1302 1750 IPR006134 GO:0000166|GO:0003677
Adu06g00405 1895 Gene3D DNA Polymerase, chain B, domain 1 30 198 - -
Adu06g00405 1895 PRINTS DNA-directed DNA-polymerase family B signature 1361 1374 IPR006172 GO:0000166|GO:0003676|GO:0003887
Adu06g00405 1895 PRINTS DNA-directed DNA-polymerase family B signature 1470 1482 IPR006172 GO:0000166|GO:0003676|GO:0003887
Adu06g00405 1895 PRINTS DNA-directed DNA-polymerase family B signature 1526 1534 IPR006172 GO:0000166|GO:0003676|GO:0003887
Adu06g00405 1895 MobiDBLite consensus disorder prediction 943 1026 - -
Adu06g00405 1895 CDD POLBc_zeta 1309 1756 - -
Adu06g00405 1895 Gene3D - 1603 1764 IPR042087 -
Adu06g00405 1895 SMART polmehr3 1034 1540 IPR006172 GO:0000166|GO:0003676|GO:0003887
Adu06g00405 1895 SUPERFAMILY Ribonuclease H-like 27 1307 IPR012337 -
Adu06g00405 1895 MobiDBLite consensus disorder prediction 980 1026 - -
Adu06g00405 1895 ProSitePatterns DNA polymerase family B signature. 1528 1536 IPR017964 GO:0000166|GO:0003676
Adu06g00405 1895 Pfam DNA polymerase family B, exonuclease domain 1094 1161 IPR006133 -
Adu06g00405 1895 Gene3D Helix hairpin bin 1427 1487 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g00405 Adu-Chr6 4802377 4814374 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g00405 39 216 Core DNA Replication Machinery Family AT5G63960 22.826 4.18e-06 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g00405 K02350 - gmx:100777934 2695.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu06g00405 06 4802377 4814374 Adu06g00405 06 4802377 4814374 ECH