Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g00384 ATGACGAAGGACAAAAACGACCAAACCACCTCCAATTTCTGCTTTCTTTTCATTTTCTTCTTCCTTCTCTCCGTTCCGTCAACGTTTGCGCAGAACCAAAATGCCGCTTCTGACAATAACAACAACTACAACACGCAGTTCAGCCCTTCGCTCGCGATAATCGTCGTCATTCTCGTTGCAGCACTCTTCCTCATGGGATTCTTCTCCATCTACATCCGCCACTGCGCCGATTCACCCTCCGGCACCGTCCTTCCAACCACGGGAGGCGGGAGGTCCAGAAGAGGGGCACGTGGTCTCGATCCTGCAGTCATCGAGACTTTCCCGATTCTGGAGTATTCGGAGGTCAAGATCCACAAGATTGGAAAAGAGGTTCTTGAATGTGCGGTGTGCCTGTGTGAATTCGAAGACACCGAAACGCTGCGTTTGATTCCCAAGTGTGACCACGTGTTCCATCCGGAGTGCATCGACGAGTGGCTAGCCTCCCACACAACCTGCCCCGTCTGCCGCGCCAACCTCGTCCCGCAACCCGGCGAGTCAGTCCATGCGGTTCCACTCGTGCCAACCACCGACGTCGAGGCGCAAAACGACGCCGTCGTTGACACCGCAGTGCCGGAGGTGCGTGTCAACGTGGCGGATGCTGAAGGAGGAGTCGCGGCGTCGTCGGAGCCGGAAGTGATTGCGATTCCGAAAAGCTTGACGCTGAATCGGAACAGGACGACGCGCGGTTCCAACCGGAGGAGGCAGTTCCCTCGGTCGCACTCGACCGGGCATTCTCTGGTCCAACCGGGAGAGAACACGGACCGGTTCACTTTGAGATTGCCTGTGGCCGTTAGAAGAGAGATAATAAACCGGGAGTTGCAACGGTCTAACAGCTTGTTGGTTTTGCCTAGGGACGGTAGTTCGAGACAAGGAAGTAGTAGGGGAAGGACTTTGAGACGGTTGGACCGGAGTTTCAAATCCGACCGGTGGGTTTTGACGATGGCGCCACCGTTCTTGGTCAGAGGATCTTCGGTTAGGTCGCCGAAGGTGGTTGATAGCACCGGCGGGGCAGGGGCGTCGTCGTCTACAGCCCCTATTTTGCCGCCGTCGGCCGTTGACTCTGCTCGACCTCCGTAA 1116 0.5654 MTKDKNDQTTSNFCFLFIFFFLLSVPSTFAQNQNAASDNNNNYNTQFSPSLAIIVVILVAALFLMGFFSIYIRHCADSPSGTVLPTTGGGRSRRGARGLDPAVIETFPILEYSEVKIHKIGKEVLECAVCLCEFEDTETLRLIPKCDHVFHPECIDEWLASHTTCPVCRANLVPQPGESVHAVPLVPTTDVEAQNDAVVDTAVPEVRVNVADAEGGVAASSEPEVIAIPKSLTLNRNRTTRGSNRRRQFPRSHSTGHSLVQPGENTDRFTLRLPVAVRREIINRELQRSNSLLVLPRDGSSRQGSSRGRTLRRLDRSFKSDRWVLTMAPPFLVRGSSVRSPKVVDSTGGAGASSSTAPILPPSAVDSARPP 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g00384 371 SUPERFAMILY RING/U-box 126 176 - -
Adu06g00384 371 SMART ring_2 127 168 IPR001841 -
Adu06g00384 371 Pfam Ring finger domain 126 169 IPR001841 -
Adu06g00384 371 PANTHER RING FINGER DOMAIN-CONTAINING 15 316 - -
Adu06g00384 371 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 15 316 - -
Adu06g00384 371 MobiDBLite consensus disorder prediction 335 371 - -
Adu06g00384 371 CDD RING-H2_EL5_like 126 169 - -
Adu06g00384 371 MobiDBLite consensus disorder prediction 340 361 - -
Adu06g00384 371 MobiDBLite consensus disorder prediction 238 265 - -
Adu06g00384 371 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 90 174 IPR013083 -
Adu06g00384 371 ProSiteProfiles Zinc finger RING-type profile. 127 169 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g00384 Adu-Chr6 4631868 4633329 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g00384 16 348 Rapid Response to Elicitors AT3G05200 46.779 3.43e-91 277
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g00384 K10664 - gmx:100781706 409.068
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu06g00384 06 4631868 4633329 Adu06g00384 06 4631868 4633329 ECH
Adu06g00384 06 4631868 4633329 Adu09g01371 09 35857976 35859203 PCT