Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g00382 ATGTGCTTGCCTGAGTCAGAGAGAGACATGGCTCTGGAAGCTGTGTTGTATACTAATAACAACATTCAACAACCACTCCCTTCTTCTTCTTATGCAATCAACGACACCAACAACAAGGACTTGGACTTTTTCAACTTCAACAATGATACTGGCCTACACTATTTACTGTCACCGCCACCACCGCCGCCGGAAGAAACAGAAACAACCATGGATACCACATCAACTTGTTCTGAGCGTCCCAAGAGAAGGAGAGGAAAGACAAGAAAGAACAAGGAGGAGATCGAGAACCAAAGAATGACTCACATTGCCGTCGAACGTAACCGACGGAAGCAAATGAATGATTACCTCTCTCTCCTTCGCAATCTCATGCCAGATTCTTACGTTCAAAGGGGCGATCAAGCGTCCATAATAGGGGGTGCTATTAACTATGTGAAGGTGCTTGAGCAGAAACTGCAGTTTCTTGCTGCTACTACTAGCGATGAAGATGGAGGATCTGATCATACAAATAACAAAATTGGAACCATGCCTTTTTCCGAGTTCTTCGGCTTCCCACAAGTGACAGGGAATGCTGATATTGAAGTAACAATGGTGGAAAGCCATGCAAATCTGAAAATAAGGTCAAAGAAAAAGCCCAAGCAGCTCTTGAAGATGGTGTCTAATTTGCAAGCCATGCGTCTCACAATCTTGCATCTTAATGTCACCACCACTAACAATGATATTGTCCTCTATTCTCTCAGCGTTAAGGTTTCATTTCTTCTTTCTTTAATTACTTCACTAATTTAA 783 0.4266 MCLPESERDMALEAVLYTNNNIQQPLPSSSYAINDTNNKDLDFFNFNNDTGLHYLLSPPPPPPEETETTMDTTSTCSERPKRRRGKTRKNKEEIENQRMTHIAVERNRRKQMNDYLSLLRNLMPDSYVQRGDQASIIGGAINYVKVLEQKLQFLAATTSDEDGGSDHTNNKIGTMPFSEFFGFPQVTGNADIEVTMVESHANLKIRSKKKPKQLLKMVSNLQAMRLTILHLNVTTTNNDIVLYSLSVKVSFLLSLITSLI 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g00382 260 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 96 157 IPR036638 GO:0046983
Adu06g00382 260 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 96 147 IPR011598 GO:0046983
Adu06g00382 260 Pfam Helix-loop-helix DNA-binding domain 97 147 IPR011598 GO:0046983
Adu06g00382 260 SMART finulus 102 153 IPR011598 GO:0046983
Adu06g00382 260 PANTHER HELIX-LOOP-HELIX-LIKE PROTEIN 67 250 - -
Adu06g00382 260 Gene3D - 78 160 IPR036638 GO:0046983
Adu06g00382 260 MobiDBLite consensus disorder prediction 58 93 - -
Adu06g00382 260 PANTHER MAX DIMERIZATION, MAD 67 250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g00382 Adu-Chr6 4575743 4577148 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g00382 87 249 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G72210 61.453 2.99e-68 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Adu06g00382 HLH 1.2e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g00382 - - aip:107645875 400.979
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu06g00382 06 4575743 4577148 Adu06g00382 06 4575743 4577148 ECH
Adu06g00382 06 4575743 4577148 Adu09g01374 09 36931722 36934141 PCT