Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g00346 ATGAAACTTCTGCTTCAAACGCCTCATCCTCATTCGCCGTCGATCACCCCGCAGTTCAGAATTCGGCAGGACTATTTTTCGTCGGAGGAAGAATTTCAGGTGCAGCTTGCGCTCGCCATAAGTGCTTCGTCCAATTCGGACTTCCGCGGTGATCACGAGAAGGATCAGATCCATGCGGCGACGCTGTTGAGCTTAGGAGGACGTGGAATCGATTCAACAAGGATTGATAACGGTGTGGCGGAGGCGCTGTCCAGGCATTATTGGGAATACAGCGTGCTTGACTATGAACAGAAAGTGGTTGATGGTTTTTATGATGTATATGGGCTTTATACTGATTTAACAATGCAAGGAAAGATGCCATCTCTGAGAGATCTTGAAGCAGAACCTGAAAGCTCTGGCTTCGAAGTTGTCATAGTTGATCGTACAATTGATCCTGCTATTGTAGAGCTGTTGCAAATTGCACATTGTATTGCATTGGACTGCCCTGTCACTGGGCTTGGTATTTTGGTTCAAAGGATTGCTGAACTTGTTACAAGCCATATGGGTGGTCCTGTAAAGGATGCTAGTACTATATTGGCAAGATGGACAGAAAGAAGTACTGAGTTAAGAACATCTCTACACACAATCATGTTGCCTCTTGGATGCATAAATATTGGGCTCTCCAGACATCGTGCTTTGCTTTTCAAGGTAATAGCTGACAATATCAATATGCCTTGTAGACTGGTTAAAGGCAGTCATTATACTGGTGTTGAGGATGATGCTGTCAACATTATAAAGTTGGAGGATGAAAGGGAGTTTTTGGTTGATCTCATGGCTGCTCCTGGCACACTTATCCCAATTGATATTTCAAATTCAAAGGATCCTTCCTTTAAACCTTACAATCCTAAGGTCTTACCAAGTTTTCCTTCCACTAAGGAAACTGATTATCCTAACACGAGACCAATGTTATCTCATGGTGAAGGTAGCAGTCAAAATTTTGCTATGAGAAATGCTTTGCCTCCACTGAATGAAAAACCATGTTTTGACGAGTCAGCTTCAAGCTTTCGTTTGAATGGAGACACCGGTGTTGGAACTTACAAAATGCCTAATTCTTTGATGCCTAACCAACCAGAAAATATTGCACCACTATCTGGAGTTTCTCTATACAAGGGGACCCATGGAAATGTGGCTGGTGATAGGACTAGATTAAATGTCAACATTGTGCCATATGGCCAGAATAGCCCCGATGACTCTCAAAGCCTTTTTGCAGATCTTAACCCTTTCCAGATAAAAGGAATTGGCAAGACATTTGTGCTTAACAAATCAGGAGCAAATAAAGCTCATGATCTTCAGAGTACAAGAAACAATACCGTCACTGGTCGACCACCGATCCCACCAAAATGGACAAATCGTTATGCTTACAATGAAGTCCCTAGGAACCTTAGTTGTGATCCTAATGAATATAGCCAACCTTTATTAGCTTCTAGTAGTTCTTCTAAGATTGAACTGAATGATTCCAAACCACCATATAGTTCAAACTTAAATAATAATAGAAATACCCAAAAATTGGCTCAAGGAACTTGTGCAGTTTCTCCATCTTATGCAGGTGAACTTAACACGGCTGAAGATCTAAACACTGATTGTAAAAAAGGGGATATGGAATATTCTCCAAATGACAAAGTTGATGTGGTTAAAGAACATGAAAACATTTATAGTGGTCAACTTGACCCAAGGAAATCCACACATGACAGGTTCATGGGGAAAAATATGAAATTAAGGGATTTAGAGAGTCAGAACCTGTCAGTTGACTCCATTACAAAAAGGGTTGATCAAATGTTGGATGATGTAGATGTCAGTGAATGTGAGATTCCATGGGAGGATCTTGTTATTGGAGAAAGAATTGGTCTAGGTTCATATGGTGAGGTGTACCATGCTGACTGGAATGGCACGGAGGTTGCTGTGAAGAAATTTTTGGAGCAGGATTTTTCAGGTGATGCCTTGAATGAATTCAAAAGAGAAGTACGGATAATGCGTAGACTGCGTCATCCAAATGTTGTTCTTTTCATTGGTGCTGTTACACGTCCTCCCAATCTTTCAATCATTACAGAGTTTCTTCCCAGAGGAAGCTTGTATCGAATACTTCATAATCCTAACTGTCAGATTGACGAGAAACAAAGGATTAAGATGGCTCTGGATGTGGCCAGAGGCATGAATTGCTTACATACCAGCACACCTACAATTGTTCACAGAGATCTCAAGTCTCCGAATCTTTTGGTGGATAAGAACTGGAATGTTAAGGTCTGTGATTTTGGGTTGTCACGCTTGAAACATAATACGTTCTTGTCATCCAAGTCAACAGGTGGAACGGTGAGAATATGA 2358 0.4126 MKLLLQTPHPHSPSITPQFRIRQDYFSSEEEFQVQLALAISASSNSDFRGDHEKDQIHAATLLSLGGRGIDSTRIDNGVAEALSRHYWEYSVLDYEQKVVDGFYDVYGLYTDLTMQGKMPSLRDLEAEPESSGFEVVIVDRTIDPAIVELLQIAHCIALDCPVTGLGILVQRIAELVTSHMGGPVKDASTILARWTERSTELRTSLHTIMLPLGCINIGLSRHRALLFKVIADNINMPCRLVKGSHYTGVEDDAVNIIKLEDEREFLVDLMAAPGTLIPIDISNSKDPSFKPYNPKVLPSFPSTKETDYPNTRPMLSHGEGSSQNFAMRNALPPLNEKPCFDESASSFRLNGDTGVGTYKMPNSLMPNQPENIAPLSGVSLYKGTHGNVAGDRTRLNVNIVPYGQNSPDDSQSLFADLNPFQIKGIGKTFVLNKSGANKAHDLQSTRNNTVTGRPPIPPKWTNRYAYNEVPRNLSCDPNEYSQPLLASSSSSKIELNDSKPPYSSNLNNNRNTQKLAQGTCAVSPSYAGELNTAEDLNTDCKKGDMEYSPNDKVDVVKEHENIYSGQLDPRKSTHDRFMGKNMKLRDLESQNLSVDSITKRVDQMLDDVDVSECEIPWEDLVIGERIGLGSYGEVYHADWNGTEVAVKKFLEQDFSGDALNEFKREVRIMRRLRHPNVVLFIGAVTRPPNLSIITEFLPRGSLYRILHNPNCQIDEKQRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKNWNVKVCDFGLSRLKHNTFLSSKSTGGTVRI 785
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g00346 785 CDD STKc_MAP3K-like 627 784 - -
Adu06g00346 785 SUPERFAMILY Protein kinase-like (PK-like) 610 777 IPR011009 -
Adu06g00346 785 PANTHER SERINE-THREONINE PROTEIN KINASE 22 782 - -
Adu06g00346 785 Pfam Ethylene-responsive protein kinase Le-CTR1 80 278 - -
Adu06g00346 785 SMART serkin_6 621 785 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu06g00346 785 ProSitePatterns Protein kinases ATP-binding region signature. 627 649 IPR017441 GO:0005524
Adu06g00346 785 ProSitePatterns Serine/Threonine protein kinases active-site signature. 740 752 IPR008271 GO:0004672|GO:0006468
Adu06g00346 785 Gene3D Phosphorylase Kinase; domain 1 614 698 - -
Adu06g00346 785 MobiDBLite consensus disorder prediction 481 511 - -
Adu06g00346 785 Gene3D Transferase(Phosphotransferase) domain 1 699 784 - -
Adu06g00346 785 PANTHER SERINE/THREONINE-PROTEIN KINASE EDR1 22 782 - -
Adu06g00346 785 ProSiteProfiles Protein kinase domain profile. 621 785 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu06g00346 785 Pfam Protein tyrosine and serine/threonine kinase 622 778 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g00346 Adu-Chr6 4175179 4182850 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g00346 22 782 MAP Kinase Kinase Kinase AT1G08720 54.429 0.0 738
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Adu06g00346 EDR1 4.7e-75 CL0125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g00346 - - aprc:113870732 1069.3