Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g00339 ATGGCATCGGAGCAACACGACACCGTTTTCCCAGAAGAAGACATGGACGAAGACGACGAGGAGTCCCAAGAGGACGAAGAAGAGGAAGACATCGATGACGACGACGTTTTGCCTGACGACGAAGAAAACGAGCCCTCTCCCTCTACCTCGTCCGCTGCCCTCGCCGTCACCGTCGCCGTTCCCTCCTCCGTCATCCCCAACGGCGAAAAGGCTCCAATTTCAACCCCCACTGCCAACGCGGCCACCACCGTGGTCGTTGCCCTCGAAGGCAGCTCCTCCGATCCGAAACGGCAGCAGCAAATCGAGGAGAAGAAGCCGCTCGACGATTCACGGAGGCTGTTCCAGCGGCTGTGGACGGACGAGGATGAGATCGAGCTTCTGCAAGGGTTTCTCGAGTACACATCGCAGCGAGGTTCATCTCACCACAACGACACTGCTTTGTTCTACGACCAAATTAAGTCGAAGCTTCAGCTGGATTTCAACAAGAACCAGCTTGTGGAGAAGATCCGGAGGTTGAAGAAGAAGTACCGCAACGTTCTCAACAAGATTGGTTCCGGTAAGGAATTCAACTTTAAGAGCGCTCACGATCAAGCCACCTTCGAGATTTCACGCAAGATCTGGAGCAACTTGGGTCCAGTCGCTGATAATGCCTTGGACGACGACGAAATCAACCTCAATCCCATTCCTAACCCTAACCCTAACCTCAATTTTACCTTCGCCCTCCCCGCGCCAAGGACTGAGACTCTATTCGGGAATTCCTCCGAGAAGAAAACGCCGCCTTCGCGGAAGCGATCACGGCCGCGATCATCCGCTGCGACAACGGTGAAAATCGAAGAGAGACGCGAGTCAATGGATGGATCGGCGTCACATAAAGAGCATAACTTTAATCTCAACGCTGCCGCTACAGGTCTCCCTGCAACGCCAAACAATAACTGTGAGAGTAACAAGTGTAGCGGTGGATATGGCATACCGGGTTTGGTTGAAGAGACGGTGAGGAGTTGTTTGTCGCCGTTGGTGAAGGAATTGGTGGGTGGTGCTGCCATGGGAGGTGGTCACTTTGGCGGAAGAGGGTTTGGAGGTGGAGGCTTTTCACTGAACCCCATTCCATTGGGGTTCGGAGCGATGAATAATTTGGGTTTGGGTTTGGGTGGTGGGGAACTAGTGGATGAGAGATGGAGGAAGCAGCAAATATTGGAATTGGAAGTGAAGCTGACTTTGTCTTGTTCTTGGGATAGGGCTTTGAAGCTGTTCTTGAATTTTGTGTCGGCTGTTATGTTACTGCCTGACAAACCTGAAAAAGTTTGGGAGAATTGTAGATAA 1320 0.522 MASEQHDTVFPEEDMDEDDEESQEDEEEEDIDDDDVLPDDEENEPSPSTSSAALAVTVAVPSSVIPNGEKAPISTPTANAATTVVVALEGSSSDPKRQQQIEEKKPLDDSRRLFQRLWTDEDEIELLQGFLEYTSQRGSSHHNDTALFYDQIKSKLQLDFNKNQLVEKIRRLKKKYRNVLNKIGSGKEFNFKSAHDQATFEISRKIWSNLGPVADNALDDDEINLNPIPNPNPNLNFTFALPAPRTETLFGNSSEKKTPPSRKRSRPRSSAATTVKIEERRESMDGSASHKEHNFNLNAAATGLPATPNNNCESNKCSGGYGIPGLVEETVRSCLSPLVKELVGGAAMGGGHFGGRGFGGGGFSLNPIPLGFGAMNNLGLGLGGGELVDERWRKQQILELEVKLTLSCSWDRALKLFLNFVSAVMLLPDKPEKVWENCR 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g00339 439 MobiDBLite consensus disorder prediction 10 42 - -
Adu06g00339 439 Coils Coil 162 182 - -
Adu06g00339 439 PANTHER BNAANNG10740D PROTEIN-RELATED 1 402 IPR007592 GO:0006355
Adu06g00339 439 Pfam Protein of unknown function, DUF573 114 208 IPR007592 GO:0006355
Adu06g00339 439 MobiDBLite consensus disorder prediction 273 289 - -
Adu06g00339 439 MobiDBLite consensus disorder prediction 248 290 - -
Adu06g00339 439 PANTHER BNAANNG10740D PROTEIN 1 402 - -
Adu06g00339 439 MobiDBLite consensus disorder prediction 1 55 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g00339 Adu-Chr6 4055681 4057571 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g00339 1 425 GeBP Transcription Factor Family AT5G28040 40.948 4.38e-78 247
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Adu06g00339 DUF573 3.5e-34 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g00339 - - gmx:100779712 357.451
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu06g00339 06 4055681 4057571 Adu09g01469 09 45649266 45650480 PCT