Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g00330 ATGTTCGATGGATTGCCATCATCATCAGAACACTTCCACCAATTCATAACACCAAGGACCACTACTTCTACTACTCTTCCTCTTCCTCATCATCATCATCATCATCATCACTTATCACCATCATCATCATCATCATCTTCGTCCTTCTCCCCACTACTCCATCATCATGCTTCTCTAACCCCCATCAACACCAACACCTTCTTACCATTTGACCCTTATAACCCTCATCATCAACAACAACAACCAAATGCCACGTTTTCTTCAGTACTCAATAACAATAACTTGTTCCACACTAGTGCTACTGATGAAAGAGTTCAAACACAAGTATTACCAAACGACTTGATTGATTCTTCCTGGAGCAACGATGAAGTTGTTGCACTCTTGAGGATCAGATCAACCATGGACACTACTTGGTTCCCTCAACTCACTTATTGGGACCATGTCTCTAGAAAGCTAGGAGAGCTTGGATTCAAGAAGAGTGGTGACAAATGCAAGGAAAAATTCGAAGATGAGACAAGATATTTCAACAACTACGCCAAGAACAATAGTTACCGATTTCTTAATGAGCTTGAAGAGTTCTATCAAGGTGATAATCATAATGAAAACCCTATGGTAGATAACCAAGATCATGTTGTGACTGAAAAGACTCAAGAGTTTGAACACCCAATGAATGCCGGAGGAGGCGATATAGAAGAAGTAGAAGAAGAAGAAGAAGAAGAGGAGGAGGAGGAAGAGGAGAGTTCAAGAGATGGCAAATCAGTGAAAGAACAATGTGAAGAAGACAATGAGAGTGAGAAGAAGATGAAGATGAAGAGGAAGAGGAAGAGGCGTTGCAGGTTTGAGATGTTGAAGGGTTTCTGTGAGAGCATTGTGAACAACATGATGGCTCAACAAGAAGAGATACATAACAAGCTCATTGAAGACATGCTGAGAAGAGATGAAGAGAAACTTCAAAGAGAGGAAGCATGGAAGAAGCAAGAGACTGAAAGGATGAACAAGGAGCTTCAGATTATGGCCCAAGAACAAGCCATTGCAGGTGATAGGCAAGCTTCCATCATTGAATTCTTGAAGAAATATGCAGCAACAAACCCTAATAATAATGAACCAACACCTTCTTCTTCAAAACTGATTATTCCATCAAGTCATCAAATTCAAATTCCACCATTATCAGCAGAAAACCCTAGCTCTATGAGTGACACATTATTACAACAAGTACATTCTTCTTCCACCCATTCATCTCCAGCTTCCCACAACAACACTACTAGTTCTTCCTCCCTCAACCGCCACGATAACTATCACTCAAATTTGCTTGTTAAGCCGTTAGTAACAGATCAGAAGGAGAATAATGTTGGGAGAAGATGGCCAAGAGATGAAGTTTTGGCTCTCATAAACCTTAGATGTGAGAGCATTAAGATGAATAATAATGCTGAAGAGAGGGAAAGTGGGAACAATAATAAGATTCCTCTATGGGAAAGAATCTCACAAGGGATGTCAGATTTGGGATACAAGAGAAGTGCAAAGAGGTGCAAAGAGAAATGGGAGAACATAAACAAGTACTTCAGAAAAACCAAGGATGTTAATAAGAAAAGGTCCATTGATTCAAGGACTTGTCCCTACTTCCATCAACTCAAGAGTCTCTATGATGAAGGAAAGCTTGTTCATCAACCGGAGACGACCACGTCGGAAAACCATTCCGGGCAACTTCTTCCTCCTTCTGATCAGGTGGGGTCTGGTGGCGGTTTCAGTGATGATCATGAGAAAACTTTGATACAAGAGCCACCATTGAATTTTGGTTAG 1797 0.4073 MFDGLPSSSEHFHQFITPRTTTSTTLPLPHHHHHHHHLSPSSSSSSSSFSPLLHHHASLTPINTNTFLPFDPYNPHHQQQQPNATFSSVLNNNNLFHTSATDERVQTQVLPNDLIDSSWSNDEVVALLRIRSTMDTTWFPQLTYWDHVSRKLGELGFKKSGDKCKEKFEDETRYFNNYAKNNSYRFLNELEEFYQGDNHNENPMVDNQDHVVTEKTQEFEHPMNAGGGDIEEVEEEEEEEEEEEEESSRDGKSVKEQCEEDNESEKKMKMKRKRKRRCRFEMLKGFCESIVNNMMAQQEEIHNKLIEDMLRRDEEKLQREEAWKKQETERMNKELQIMAQEQAIAGDRQASIIEFLKKYAATNPNNNEPTPSSSKLIIPSSHQIQIPPLSAENPSSMSDTLLQQVHSSSTHSSPASHNNTTSSSSLNRHDNYHSNLLVKPLVTDQKENNVGRRWPRDEVLALINLRCESIKMNNNAEERESGNNNKIPLWERISQGMSDLGYKRSAKRCKEKWENINKYFRKTKDVNKKRSIDSRTCPYFHQLKSLYDEGKLVHQPETTTSENHSGQLLPPSDQVGSGGGFSDDHEKTLIQEPPLNFG 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g00330 598 MobiDBLite consensus disorder prediction 557 572 - -
Adu06g00330 598 MobiDBLite consensus disorder prediction 21 50 - -
Adu06g00330 598 MobiDBLite consensus disorder prediction 248 268 - -
Adu06g00330 598 Gene3D - 454 522 - -
Adu06g00330 598 Gene3D - 119 177 - -
Adu06g00330 598 ProSiteProfiles Myb-like domain profile. 446 517 IPR001005 -
Adu06g00330 598 MobiDBLite consensus disorder prediction 229 247 - -
Adu06g00330 598 Pfam Myb/SANT-like DNA-binding domain 117 182 IPR044822 -
Adu06g00330 598 Pfam Myb/SANT-like DNA-binding domain 452 546 IPR044822 -
Adu06g00330 598 MobiDBLite consensus disorder prediction 557 598 - -
Adu06g00330 598 PANTHER - 42 562 - -
Adu06g00330 598 PANTHER TRIHELIX TRANSCRIPTION FACTOR GTL2 42 562 - -
Adu06g00330 598 SMART sant 450 519 IPR001005 -
Adu06g00330 598 SMART sant 115 174 IPR001005 -
Adu06g00330 598 Coils Coil 223 250 - -
Adu06g00330 598 MobiDBLite consensus disorder prediction 386 430 - -
Adu06g00330 598 CDD GT1 452 524 - -
Adu06g00330 598 ProSiteProfiles Myb-like domain profile. 111 172 IPR001005 -
Adu06g00330 598 MobiDBLite consensus disorder prediction 219 271 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g00330 Adu-Chr6 3990173 3992788 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g00330 119 547 Trihelix Transcription Factor Family AT5G28300 42.589 6.91e-91 291
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Adu06g00330 Myb_DNA-bind_4 6.7e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g00330 - - aip:107645832 1028.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu06g00330 06 3990173 3992788 Adu06g00330 06 3990173 3992788 ECH