Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g00329 ATGGAAAGATATAGTTCTAGTTTAGCAACAACGACGTCGTTTCGCCGCTCCGTTGAACACCGCGTTCTCAGATTTGTCTCTTCCCTCCGCCTTCTGAATATCTTCCAATTTCTTCAACTTGTTCTTACTCTCACTCAGGAGAGTGCTTTTGGTTCTGCACTTCTTGTCAAGCATAAGCATGAGAAGAAAAAATATGTTCTGAAGAAGATTCGCCTTGCCCGTCAAACTGAGCGTTCCCGCAGGTCTGCACACCAGGAGATGGAGCTCATTTCCAAATTAAGAAATCCATTTATAGTAGAGTACAAAGATTCATGGGTAGAAAAGGGTTGCTATGTATGCATCATTATAGGTTATTGTGAAGGTGGAGATATGGCAGAAGCTATAAAGAAAGCTAACGGTGTCATGTTTTCTGAGGAGAAACTTTGTAAGTGGCTTGTTCAACTTCTTATGGCACTTGACTACTTGCACATGAACCATATTCTTCATCGTGATGTCAAGTGTTCCAATATATTCTTGACAAAAGATCATGATATACGTCTTGGCGATTTTGGACTTGCCAAAATGTTGACTTCGGATGACCTTACTTCCTCTGTTGTGGGAACACCTAGCTACATGTGCCCTGAGCTCCTTGCTGACATACCCTATGGTTCTAAATCAGATATTTGGTCCTTGGGATGCTGTATATATGAAATGGCCTCGCTTAAGCCTGCGTTCAAAGCATTTGATATACAAGCACTAATTAACAAGATTAATAAGTCCATAGTGGCTCCACTGCCAACAAAATATTCTGGTGCATTTCGAGGTCTTGTTAAAAGCATGCTGCGGAAAAACCCAGAGCTTAGGCCTAGTGCTGCAGAGCTACTTGGGCATCCACATCTTCAACCTTATGTTCTTAAGATCCATCTCAAAATCAATAGCCCCAGTCGAAATACATTGCCAGGTCGTTGGCCAGATTCCGACTACATTAAGAAAACTAGACTTTTTAGCCTGGAAGATGATCCTGTTTCCATATACAGGGATAAGTGGAATACTTTTAGCAATGATCGGAACTTAAACCCTAGTATATCTGGAGCAGAGCAAGATTCTCATTGCTCTACTCTGGAAATAGATTGTACTCCTGATCATTTGAATGAAAGGTTAGCAGAACTGGAAGTTGAGGATAGCCGTGAAGTGAAGTCAATTCACAAGCCAGTTGTTTCTAGAACTTCTACCATTGGCAAGACTTCAACACACACTTCACCAAAAGCTTCTTCTAACAAGAAGAAATCAACAGAACCCTCTAAGAATTATAAGCTTCCTGCTTCTCACCATAACACCAAACAACGTATCCATGGTCAGAGTCGCAGAGTATCCCTGCCGACGGCAAGAAGTGGTGCCATTCGGCAGCTGTCTCACAGGCCTAGCATTGGCTTACTCGACCATTTAAATTCACCCAATGTTTCGGTTAACGCCCCCCGTATTGATAAAATAGCAGAATTTTCATTAGCATCATATGAAGATCAATTGTTTCCCATTACTAGACCTTCATCAACTTCTGCGCAGGGCTCCTGGGGCACTCCGCCCTGTGTCAATGATTCAACAATGGTAGACAAATGTACAATCGAGCTAGGTGATAGAGCCTACACCAGGCCAAAATCTACAGATTCTTGGCAGGGAATTAAGCGCAGCATTTTAAAGAATGATGAGGTTAAAAGTGGCTCATCCGATCAAAATGCAACTGCTGGCGCATCAAGTAACAACTCTTCAGACCTGCGGCGTCGACAGTTTGACCCTTCTTCATTCCAACAAAGGGCTGAAGCGTTAGAAGGCTTGCTTGAGTTTAGCGCAAGACTACTACAGCAAGAAAGGTACGACGAACTTGGAGTTTTATTAAAACCGTTTGGACCCGAGAAGGTTTCCCCAAGGGAAACTGCTATTTGGTTGAGCAAGAGCTTCAAAGACAATAGTGCCAACCGGGAACAATCGGTGTAA 1971 0.4282 MERYSSSLATTTSFRRSVEHRVLRFVSSLRLLNIFQFLQLVLTLTQESAFGSALLVKHKHEKKKYVLKKIRLARQTERSRRSAHQEMELISKLRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVMFSEEKLCKWLVQLLMALDYLHMNHILHRDVKCSNIFLTKDHDIRLGDFGLAKMLTSDDLTSSVVGTPSYMCPELLADIPYGSKSDIWSLGCCIYEMASLKPAFKAFDIQALINKINKSIVAPLPTKYSGAFRGLVKSMLRKNPELRPSAAELLGHPHLQPYVLKIHLKINSPSRNTLPGRWPDSDYIKKTRLFSLEDDPVSIYRDKWNTFSNDRNLNPSISGAEQDSHCSTLEIDCTPDHLNERLAELEVEDSREVKSIHKPVVSRTSTIGKTSTHTSPKASSNKKKSTEPSKNYKLPASHHNTKQRIHGQSRRVSLPTARSGAIRQLSHRPSIGLLDHLNSPNVSVNAPRIDKIAEFSLASYEDQLFPITRPSSTSAQGSWGTPPCVNDSTMVDKCTIELGDRAYTRPKSTDSWQGIKRSILKNDEVKSGSSDQNATAGASSNNSSDLRRRQFDPSSFQQRAEALEGLLEFSARLLQQERYDELGVLLKPFGPEKVSPRETAIWLSKSFKDNSANREQSV 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g00329 656 Pfam Protein kinase domain 49 292 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu06g00329 656 SMART serkin_6 38 293 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu06g00329 656 Gene3D Phosphorylase Kinase; domain 1 34 118 - -
Adu06g00329 656 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK 48 641 - -
Adu06g00329 656 Gene3D Transferase(Phosphotransferase) domain 1 119 306 - -
Adu06g00329 656 CDD STKc_Nek 49 293 - -
Adu06g00329 656 ProSitePatterns Serine/Threonine protein kinases active-site signature. 160 172 IPR008271 GO:0004672|GO:0006468
Adu06g00329 656 MobiDBLite consensus disorder prediction 385 457 - -
Adu06g00329 656 MobiDBLite consensus disorder prediction 561 592 - -
Adu06g00329 656 ProSiteProfiles Protein kinase domain profile. 39 293 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu06g00329 656 MobiDBLite consensus disorder prediction 397 420 - -
Adu06g00329 656 PANTHER SERINE/THREONINE-KINASE NEK4 48 641 - -
Adu06g00329 656 SUPERFAMILY Protein kinase-like (PK-like) 49 341 IPR011009 -
Adu06g00329 656 MobiDBLite consensus disorder prediction 563 592 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g00329 Adu-Chr6 3970496 3975911 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g00329 50 324 MAP Kinase Kinase Kinase AT1G53570 30.169 4.93e-36 140
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NEK Adu06g00329 Pkinase 9.6e-59 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g00329 K08857 - gmx:100796019 942.954
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu06g00329 06 3970496 3975911 Adu06g00329 06 3970496 3975911 ECH
Adu06g00329 06 3970496 3975911 Adu02g00896 02 15577006 15579436 PCT