Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g00325 ATGGATGATGGATTATTGGTCCTCAAGAATGGATGGAAAAAGTTTGTTAGAGACAAGTGTTTGGAACAAGCTGATTTCTTGGTCTTTGAGTATGATGGCAACTCCAAGTTTCATGTGAAGATATTTTCCAAAAGTGGATGCAGAAAAGAAGCTGCAATTAGTGGGAAACTTAACCCCGTTATGATCTCGGATAATGAAGATTCTGATCTGCAGAATAGTAAAAGAAAGCATGAGCGTGGCGTTAAAAGGAAACTTTCACCAATCACGCCACTCAAATTAAACCAGAAATCTCACTCAAAAAAGGGAACTACTGTACGGAAATCCAAAAGAGTTAAGAATGGGGCAAATGGTAGCAACTGTGAGAGCAAGGCATCTGGTCTTGTGAAGTTCGTTCCCCTGAAGAACCCTCATTTTGTGACACCTATGTCACACTGGAGAATGAGGAAAATGGAAATTCCTAGAAGAGTAACAAAGGAATTGAACATCAGCCTAAAATCAGGGATTATGCTGAGAGACGAGGATGACAAGCTATGGCCGGTGAAGATCCTCACCGGGGATCGCGGACGCTGCTATTTCGCAAAAGGGTGGTCTAGTTTCTGGAAGGCTAAAAGTGTTGAAGAGGGCAACCTTTGTGATTTCAAGTTTGTTGTTGGCAAAGAGAATAGAGCTGAGGAACTGCTTGTGCGAGTACGCTCACATTAA 702 0.4217 MDDGLLVLKNGWKKFVRDKCLEQADFLVFEYDGNSKFHVKIFSKSGCRKEAAISGKLNPVMISDNEDSDLQNSKRKHERGVKRKLSPITPLKLNQKSHSKKGTTVRKSKRVKNGANGSNCESKASGLVKFVPLKNPHFVTPMSHWRMRKMEIPRRVTKELNISLKSGIMLRDEDDKLWPVKILTGDRGRCYFAKGWSSFWKAKSVEEGNLCDFKFVVGKENRAEELLVRVRSH 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g00325 233 Gene3D - 118 231 IPR015300 -
Adu06g00325 233 SMART B3_2 138 224 IPR003340 GO:0003677
Adu06g00325 233 PANTHER B3 DOMAIN-CONTAINING 4 221 - -
Adu06g00325 233 Gene3D - 2 47 IPR015300 -
Adu06g00325 233 CDD B3_DNA 7 43 IPR003340 GO:0003677
Adu06g00325 233 SUPERFAMILY DNA-binding pseudobarrel domain 4 50 IPR015300 -
Adu06g00325 233 CDD B3_DNA 136 232 IPR003340 GO:0003677
Adu06g00325 233 Pfam B3 DNA binding domain 6 44 IPR003340 GO:0003677
Adu06g00325 233 Pfam B3 DNA binding domain 140 232 IPR003340 GO:0003677
Adu06g00325 233 MobiDBLite consensus disorder prediction 63 119 - -
Adu06g00325 233 ProSiteProfiles B3 DNA-binding domain profile. 135 233 IPR003340 GO:0003677
Adu06g00325 233 SUPERFAMILY DNA-binding pseudobarrel domain 133 216 IPR015300 -
Adu06g00325 233 ProSiteProfiles B3 DNA-binding domain profile. 1 45 IPR003340 GO:0003677
Adu06g00325 233 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS01G0723500-LIKE ISOFORM X1 4 221 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g00325 6 232 B3 DNA Binding Superfamily AT5G66980 32.271 4.05e-29 110
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Adu06g00325 B3 1.7e-12 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g00325 - - adu:107491799 478.789