Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g00288 ATGGCTCCCAATCCAAGAGTTGTTCAGGCCTTTAATGCTATGAAGGCATTAGGAATTTCAGCTGAAGAGGTGAAGCCGGTGTTGGCAGAGTTGTTAAGAGTCTACGATAAAAATTGGGAACTTATTGAAGAGGACAATTATCGGACACTTGTAGATGCATACTTTGACTTCAAAGAAGATAAGGGAACAGATGCTAAGAAAAAAGTGTCTGTCAATTTTCATGCTCGAGAAAGACCAAAACAGAAGCTGCACTTGATAGATGATGATGATGATGATAACCAGGTTTTGTCAACAACAAATAAGTCGAGCCAAAAGTTATCCATTGCAGATAGGAAAACACCTCCAGGTAATTCTTCACAAGAAATCATTGAGCCATCTCAAGCTTCTAAGCAAGATAGCAAGCCCAGAACTAGTTCAGAAGCATCACATGCAAGGTTGATGAAGGTAGAAAGGGTTTCCAGTTCACCTTGCAACGCACCTAAATATAGAAAAACGTATTACGACATAGCACCATCTTCAGGGCACTCTGTTGATTATGAGAAAGAGCTAGTGAAACCCAGAACTAAGAAACCAAAGTTACAGACTCAGCCTATTTCAACAAATCATGACGGTAATCATGTTAATCTATTGTTATTTAACTTCTTGCTGATTTTAGGATTATTTGATGCTTCCTCATCATGCAATAATAATGCCACAACTAGCACGGGAAATATCACTATTGCTTCTTCACCCCGTGGAGAAGTTAAATTGTCTTTAAACTGCAACTCTGCCTTGGCTCAACCGGACTTCTGTAATCCTAATTTGGATACTGTGATGAAGTTCATGGAGGAGAAGTACCTTAGCTCTTGCATGACTCAGGATCCTCAGTTTTCAATGGTGAAGCTACTAAATGGTTTATGCAGGAGCTATCTGATGTTGGGACATAAAAAACGTTCGAATTTCAGGTCTTCTTCCAGCAACTTGGCAGTTACTCAAGATGAAAGGAGTTCCTCTCAGTTTATCAATGACATAACAAGAGGTTCAGAAGAGGTGAAAATCCCATTAATAGATGAAAATGGCAGTGAGGACTTGCCAAAATTTAATTATATACCGCAAAATATAATATACCAAAGTGCTAATGTAAATATTTCATTGGCTCGAATTTCGGATGAGGGTTGCTGTTCTGATTGTTCAGGCAACTGTCTTTCTGCTTCACTGCCTTGTGCATGTGCCCGTGAAACTGGTGGAGAGTTTGCTTACACTCCTGAAGGTGTGTTGAACGAAGAGTTTCTTAAAGCTTGCATTTCCATGAAGAATGAACCTCAAGATCGTCATTTCGTGTATTGTCAAGAGTGCCCATTGGAGAAGTCTAAGAATGAGTTCATGCCCGAACAATGCAAAGGGCATATGGTTAGGAAGTTTATCAAAGAATGCTGGAGGAAATGTGGCTGTGACATGCGATGTGGAAATCGAGTAGTACAAAGAGGTATAAGATGCAAATTGCAGGTGTACATGACTCGTGAGGGAAAGGGCTGGGGCCTTAGAACACTTGAGGATTTGCCGAAGGGTACTTTTGTATGTGAATACGTTGGGGAAATATTAACCAATACAGAGTTATACGAAAGGAATGTGCACAGCAGTTGCAGCAATGACAGACACACATATCCCGTAACTCTTGATGCAGACTGGGGATCAGAAGGGGTCTTGAAAGATGAGGAAGCGCTTTGTTTAGATGCAACATATAATGGAAATGTTGGAAGGTTTATCAATCACAGATGCTTTGATGCAAATCTCATTGACATTCCTGTTGAAGTGGAGACTCCTGATCACCACTATTACCATCTTGCTTTCTTTACCACCCGAGATGTGAGAGCCAATGAGGAGTTGACGTGGGATTATGGTATTGACTTTGATGATCATGACCATCCTATTAAAGCATTTCAATGTTCTTGTGGAAGCGCTTTCTGCGGTGATAAGAAGAGAAAAGGGAAAGTAGAAAATCAGATCCATGTATCTGCAAGAACAAGTGTGTCTGAATTTGGAAGCAGCCGAAGCAATACCTGCAGCTAG 2049 0.4061 MAPNPRVVQAFNAMKALGISAEEVKPVLAELLRVYDKNWELIEEDNYRTLVDAYFDFKEDKGTDAKKKVSVNFHARERPKQKLHLIDDDDDDNQVLSTTNKSSQKLSIADRKTPPGNSSQEIIEPSQASKQDSKPRTSSEASHARLMKVERVSSSPCNAPKYRKTYYDIAPSSGHSVDYEKELVKPRTKKPKLQTQPISTNHDGNHVNLLLFNFLLILGLFDASSSCNNNATTSTGNITIASSPRGEVKLSLNCNSALAQPDFCNPNLDTVMKFMEEKYLSSCMTQDPQFSMVKLLNGLCRSYLMLGHKKRSNFRSSSSNLAVTQDERSSSQFINDITRGSEEVKIPLIDENGSEDLPKFNYIPQNIIYQSANVNISLARISDEGCCSDCSGNCLSASLPCACARETGGEFAYTPEGVLNEEFLKACISMKNEPQDRHFVYCQECPLEKSKNEFMPEQCKGHMVRKFIKECWRKCGCDMRCGNRVVQRGIRCKLQVYMTREGKGWGLRTLEDLPKGTFVCEYVGEILTNTELYERNVHSSCSNDRHTYPVTLDADWGSEGVLKDEEALCLDATYNGNVGRFINHRCFDANLIDIPVEVETPDHHYYHLAFFTTRDVRANEELTWDYGIDFDDHDHPIKAFQCSCGSAFCGDKKRKGKVENQIHVSARTSVSEFGSSRSNTCS 682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g00288 682 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 1 680 IPR025776 -
Adu06g00288 682 Pfam Ubiquitin-binding WIYLD domain 6 59 IPR018848 GO:0018024
Adu06g00288 682 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SUVR2-LIKE PROTEIN 1 666 - -
Adu06g00288 682 ProSiteProfiles Pre-SET domain profile. 390 489 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Adu06g00288 682 MobiDBLite consensus disorder prediction 96 135 - -
Adu06g00288 682 Gene3D SET domain 337 652 IPR046341 -
Adu06g00288 682 PANTHER INACTIVE HISTONE-LYSINE N-METHYLTRANSFERASE SUVR1-RELATED 1 666 - -
Adu06g00288 682 MobiDBLite consensus disorder prediction 88 152 - -
Adu06g00288 682 Pfam Pre-SET motif 337 484 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Adu06g00288 682 ProSiteProfiles SET domain profile. 492 627 IPR001214 GO:0005515
Adu06g00288 682 Gene3D - 1 60 IPR043017 -
Adu06g00288 682 CDD SET_SETDB-like 358 627 - -
Adu06g00288 682 SMART preset_2 334 476 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Adu06g00288 682 Pfam SET domain 504 627 IPR001214 GO:0005515
Adu06g00288 682 SMART set_7 492 633 IPR001214 GO:0005515
Adu06g00288 682 SUPERFAMILY SET domain 344 649 IPR046341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g00288 Adu-Chr6 3502402 3509300 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g00288 468 627 C2H2 Transcription Factor Family AT2G23740 43.478 2.84e-31 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Adu06g00288 Pre-SET 1.2e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g00288 - - gsj:114402909 847.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu06g00288 06 3502402 3509300 Adu02g01054 02 18702740 18712241 PCT