Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g00286 ATGTCTTCATGTTCTCCTGTTCTTCCAACACCACTGGATAACAAGTACATGAAACCCCCAGATTCGTTTCAGCTTTCGCCTATAAGAGAAATGACTGTGAATCCATCCCCCTTACAATCTACATCGTCGAATTCCAACACCAGAAGTACCGGACACACATTTTCGTCCCCTGATGTTGTCTCTTTTTCTTCAGCTTCGCAGCATGAAAGGCAGCATCAACCTTCTTCCTTTGTTTCACAGACATTAGGTGAAGACAGTGTGTCTTCTGAGCTACATTCAGCAACATTCATTTCGCAGCCTCAAGAAAGCGACGAGATTTCCTGGGGACCGGATCCGTTCCAGGGTATGCTTGGTTTCCCTGAAAATGTTTCTGTCCAGCATGATCAGGTGGAAAATGGTGCTTGTTATACAAACGATGACAATGTCAAACAATCTGATTTTGGGGAGTGGGTTGATAAGTTAATGTCAATTGATGATTCTTATGACCCAAATTGGAGTCAGCTCCTTGGTGATGATAATGAATCAGAACCAAAACCAAAGCCCATCCAGCAGCAGAATGTACCATCTAAAGAAGTTAAAGGTCTTCCTAGTTCTCCATCAACTGCATCACAAACGAAGCCTCGAATGCGTTGGACACCGGAACTTCACGAGGCCTTTGTGGAAGCGGTGAATCAGCTTGGTGGCAGCGAGAAGGCTACTCCCAAGGGGGTCTTGAACCTCATGAAAGTTAAGGGCCTTACGATCTACCATGTCAAAAGCCACCTACAGAAGTATAGAACGGCCAGGTACAAACCTGAGACCCCAGAAGGAACTTCTGAGAAAAAGCTAAGTTCAATTGAAGAAATGAAATCTCTAGACTTGAAAACGAGTAAGGGGATTACCGAGGCATTGCGCTTGCAAATGGAACTCCAGAAGCGGCTTCACGAGCAACTCGAGATCCAAAGGAAGTTGCAGATTCAAATAGAAAACCAAGGGAAGCGCCTCCAGATGATGTTCGAGCAGCAGAGAGAGATGGGAGATAGCAAGTTTAAGGACTCCTCCTCTTCCTCCTTGGACGAGCCTTCCAATTCAGAAGCTCCAAAAGAGGAAAATGAGAAATTAGGAAGTGAAAGTTGCATAACGAAAGCCGGGCCAGGAGAAAGCTCTCGGGACGAAAGCACGAAGCAGGAAATGGCAGATGAAGCTCAAATTAGTGTCCCACCACCCACAAAACGGGTCAAGACTTAA 1227 0.4564 MSSCSPVLPTPLDNKYMKPPDSFQLSPIREMTVNPSPLQSTSSNSNTRSTGHTFSSPDVVSFSSASQHERQHQPSSFVSQTLGEDSVSSELHSATFISQPQESDEISWGPDPFQGMLGFPENVSVQHDQVENGACYTNDDNVKQSDFGEWVDKLMSIDDSYDPNWSQLLGDDNESEPKPKPIQQQNVPSKEVKGLPSSPSTASQTKPRMRWTPELHEAFVEAVNQLGGSEKATPKGVLNLMKVKGLTIYHVKSHLQKYRTARYKPETPEGTSEKKLSSIEEMKSLDLKTSKGITEALRLQMELQKRLHEQLEIQRKLQIQIENQGKRLQMMFEQQREMGDSKFKDSSSSSLDEPSNSEAPKEENEKLGSESCITKAGPGESSRDESTKQEMADEAQISVPPPTKRVKT 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g00286 408 Gene3D - 205 264 - -
Adu06g00286 408 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 203 263 IPR017930 -
Adu06g00286 408 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 206 260 IPR006447 GO:0003677
Adu06g00286 408 MobiDBLite consensus disorder prediction 336 408 - -
Adu06g00286 408 Pfam Myb-like DNA-binding domain 208 259 IPR001005 -
Adu06g00286 408 MobiDBLite consensus disorder prediction 162 209 - -
Adu06g00286 408 Coils Coil 294 314 - -
Adu06g00286 408 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 3 408 IPR044848 GO:0003700
Adu06g00286 408 MobiDBLite consensus disorder prediction 1 115 - -
Adu06g00286 408 PANTHER MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEIN 3 408 - -
Adu06g00286 408 MobiDBLite consensus disorder prediction 27 105 - -
Adu06g00286 408 MobiDBLite consensus disorder prediction 179 208 - -
Adu06g00286 408 Pfam MYB-CC type transfactor, LHEQLE motif 293 337 IPR025756 -
Adu06g00286 408 SUPERFAMILY Homeodomain-like 204 260 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g00286 Adu-Chr6 3483791 3487643 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g00286 31 353 G2-like Transcription Factor Family AT3G04450 46.459 7.78e-84 260
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Adu06g00286 Myb_DNA-binding 1.3e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g00286 - - gmx:100803267 528.094
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu06g00286 06 3483791 3487643 Adu06g00286 06 3483791 3487643 ECH
Adu06g00286 06 3483791 3487643 Adu02g01034 02 17468407 17471771 PCT